BLASTX nr result

ID: Cimicifuga21_contig00017552 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017552
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15958.3| unnamed protein product [Vitis vinifera]               46   7e-08
ref|XP_002279155.1| PREDICTED: ABC transporter G family member 3...    46   7e-08
ref|XP_004169718.1| PREDICTED: ABC transporter G family member 3...    46   3e-06
ref|XP_004143156.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...    46   3e-06
ref|XP_002299812.1| predicted protein [Populus trichocarpa] gi|2...    41   4e-06

>emb|CBI15958.3| unnamed protein product [Vitis vinifera]
          Length = 1483

 Score = 46.2 bits (108), Expect(2) = 7e-08
 Identities = 19/28 (67%), Positives = 25/28 (89%)
 Frame = +3

Query: 309  MLEVSTPAAEHRIGQDLADIHRNSEQYR 392
            MLE++TPAAE RIG+D AD++RNSE +R
Sbjct: 1150 MLEITTPAAEERIGEDFADLYRNSENFR 1177



 Score = 35.0 bits (79), Expect(2) = 7e-08
 Identities = 14/19 (73%), Positives = 15/19 (78%)
 Frame = +1

Query: 250  FMQRIEGIPPIPHGYNPAT 306
            + Q I GIPPIP GYNPAT
Sbjct: 1130 YFQGISGIPPIPDGYNPAT 1148


>ref|XP_002279155.1| PREDICTED: ABC transporter G family member 31-like [Vitis vinifera]
          Length = 1415

 Score = 46.2 bits (108), Expect(2) = 7e-08
 Identities = 19/28 (67%), Positives = 25/28 (89%)
 Frame = +3

Query: 309  MLEVSTPAAEHRIGQDLADIHRNSEQYR 392
            MLE++TPAAE RIG+D AD++RNSE +R
Sbjct: 1082 MLEITTPAAEERIGEDFADLYRNSENFR 1109



 Score = 35.0 bits (79), Expect(2) = 7e-08
 Identities = 14/19 (73%), Positives = 15/19 (78%)
 Frame = +1

Query: 250  FMQRIEGIPPIPHGYNPAT 306
            + Q I GIPPIP GYNPAT
Sbjct: 1062 YFQGISGIPPIPDGYNPAT 1080


>ref|XP_004169718.1| PREDICTED: ABC transporter G family member 31-like, partial
           [Cucumis sativus]
          Length = 699

 Score = 46.2 bits (108), Expect(2) = 3e-06
 Identities = 21/28 (75%), Positives = 25/28 (89%)
 Frame = +3

Query: 309 MLEVSTPAAEHRIGQDLADIHRNSEQYR 392
           MLEV+TPAAE RIG+D ADI+RNS Q+R
Sbjct: 365 MLEVTTPAAEQRIGRDFADIYRNSGQFR 392



 Score = 29.6 bits (65), Expect(2) = 3e-06
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +1

Query: 238 IISSFMQRIEGIPPIPHGYNPAT 306
           I+  +++ I G+ PIP  YNPAT
Sbjct: 341 IMIDYLKGINGVSPIPDAYNPAT 363


>ref|XP_004143156.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter G family member
            31-like [Cucumis sativus]
          Length = 1486

 Score = 46.2 bits (108), Expect(2) = 3e-06
 Identities = 21/28 (75%), Positives = 25/28 (89%)
 Frame = +3

Query: 309  MLEVSTPAAEHRIGQDLADIHRNSEQYR 392
            MLEV+TPAAE RIG+D ADI+RNS Q+R
Sbjct: 1125 MLEVTTPAAEQRIGRDFADIYRNSGQFR 1152



 Score = 29.3 bits (64), Expect(2) = 3e-06
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 238  IISSFMQRIEGIPPIPHGYNPAT 306
            I+  + + I G+ PIP  YNPAT
Sbjct: 1101 IMIDYFEGINGVSPIPDAYNPAT 1123


>ref|XP_002299812.1| predicted protein [Populus trichocarpa] gi|222847070|gb|EEE84617.1|
            predicted protein [Populus trichocarpa]
          Length = 1432

 Score = 40.8 bits (94), Expect(2) = 4e-06
 Identities = 16/28 (57%), Positives = 22/28 (78%)
 Frame = +3

Query: 309  MLEVSTPAAEHRIGQDLADIHRNSEQYR 392
            MLEV+TP  E R+G+D A+++R S QYR
Sbjct: 1097 MLEVTTPTVEERVGEDFAELYRKSSQYR 1124



 Score = 34.3 bits (77), Expect(2) = 4e-06
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +1

Query: 238  IISSFMQRIEGIPPIPHGYNPAT 306
            I+  + Q I+G+PP P GYNPAT
Sbjct: 1073 IMIDYFQGIKGVPPCPDGYNPAT 1095


Top