BLASTX nr result

ID: Cimicifuga21_contig00017534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017534
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF23176.1|AF216497_1 P-glycoprotein [Gossypium hirsutum]          129   2e-28
ref|XP_002304346.1| multidrug/pheromone exporter, MDR family, AB...   129   3e-28
ref|XP_003533440.1| PREDICTED: ABC transporter B family member 2...   128   5e-28
ref|XP_002277547.1| PREDICTED: ABC transporter B family member 2...   127   9e-28
ref|XP_003517674.1| PREDICTED: ABC transporter B family member 2...   126   2e-27

>gb|AAF23176.1|AF216497_1 P-glycoprotein [Gossypium hirsutum]
          Length = 1249

 Score =  129 bits (325), Expect = 2e-28
 Identities = 66/111 (59%), Positives = 79/111 (71%)
 Frame = +3

Query: 3    KTKVAGDVGEALTKVDGNIEMRSVNFSYPSRPDIVIFKDFNLQVSASKSMALVXXXXXXX 182
            KT+V GD GE LT V+G IE++ V+FSYPSRPD+VIFKDF+L+V + KSMALV       
Sbjct: 986  KTQVVGDAGEELTNVEGTIELKGVHFSYPSRPDVVIFKDFDLKVRSGKSMALVGQSGSGK 1045

Query: 183  XXAISLILRFYDPTAGRVMIDGXXXXXXXXXXXXXFIGLVQQEPALFATSI 335
               ++LILRFYDPT+G+VMIDG              IGLVQQEPALFATSI
Sbjct: 1046 SSVLALILRFYDPTSGKVMIDGRDVKKLKLKSLRKHIGLVQQEPALFATSI 1096



 Score =  100 bits (249), Expect = 1e-19
 Identities = 52/110 (47%), Positives = 68/110 (61%)
 Frame = +3

Query: 6   TKVAGDVGEALTKVDGNIEMRSVNFSYPSRPDIVIFKDFNLQVSASKSMALVXXXXXXXX 185
           +K +   G  L+KV+GNIE+++V+FSYPSRPD+VIF  F L +   K +ALV        
Sbjct: 352 SKTSSKTGRKLSKVEGNIELKNVSFSYPSRPDVVIFDRFCLNIPTGKIVALVGGSGSGKS 411

Query: 186 XAISLILRFYDPTAGRVMIDGXXXXXXXXXXXXXFIGLVQQEPALFATSI 335
             ISLI RFY+P AG +++DG              IGLV QEPALFAT+I
Sbjct: 412 TVISLIERFYEPLAGEILLDGNNIKGLDLKWLRQQIGLVNQEPALFATTI 461


>ref|XP_002304346.1| multidrug/pheromone exporter, MDR family, ABC transporter family
            [Populus trichocarpa] gi|222841778|gb|EEE79325.1|
            multidrug/pheromone exporter, MDR family, ABC transporter
            family [Populus trichocarpa]
          Length = 1250

 Score =  129 bits (323), Expect = 3e-28
 Identities = 68/111 (61%), Positives = 77/111 (69%)
 Frame = +3

Query: 3    KTKVAGDVGEALTKVDGNIEMRSVNFSYPSRPDIVIFKDFNLQVSASKSMALVXXXXXXX 182
            KT+V GDVGE L  V+G IE+R V FSYPSRPD +IFKDF+L+V + KSMALV       
Sbjct: 985  KTQVMGDVGEELKNVEGTIELRGVQFSYPSRPDALIFKDFDLRVRSGKSMALVGQSGSGK 1044

Query: 183  XXAISLILRFYDPTAGRVMIDGXXXXXXXXXXXXXFIGLVQQEPALFATSI 335
               +SLILRFYDPTAG+VMIDG              IGLVQQEPALFATSI
Sbjct: 1045 SSVLSLILRFYDPTAGKVMIDGIDIKELKVKSLRKHIGLVQQEPALFATSI 1095



 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 49/110 (44%), Positives = 65/110 (59%)
 Frame = +3

Query: 6   TKVAGDVGEALTKVDGNIEMRSVNFSYPSRPDIVIFKDFNLQVSASKSMALVXXXXXXXX 185
           +K++ + G  + +VDG+IE + V F YPSRPD+ IF  F L + + K +ALV        
Sbjct: 351 SKISSESGRKVDRVDGHIEFKDVCFRYPSRPDVTIFDKFCLDIPSGKIVALVGGSGSGKS 410

Query: 186 XAISLILRFYDPTAGRVMIDGXXXXXXXXXXXXXFIGLVQQEPALFATSI 335
             ISLI RFYDP  G++++DG              IGLV QEPALFATSI
Sbjct: 411 TVISLIERFYDPLFGKILLDGNDIRDLDLKWLRQQIGLVNQEPALFATSI 460


>ref|XP_003533440.1| PREDICTED: ABC transporter B family member 2-like [Glycine max]
          Length = 1245

 Score =  128 bits (321), Expect = 5e-28
 Identities = 66/111 (59%), Positives = 78/111 (70%)
 Frame = +3

Query: 3    KTKVAGDVGEALTKVDGNIEMRSVNFSYPSRPDIVIFKDFNLQVSASKSMALVXXXXXXX 182
            K+ ++ DVGE L  VDG IE++ +NFSYPSRPD++IFKDFNL+V A KS+ALV       
Sbjct: 984  KSGISCDVGEELKTVDGTIELKRINFSYPSRPDVIIFKDFNLRVPAGKSVALVGQSGSGK 1043

Query: 183  XXAISLILRFYDPTAGRVMIDGXXXXXXXXXXXXXFIGLVQQEPALFATSI 335
               ISLILRFYDPT+GRV+IDG              IGLVQQEPALFATSI
Sbjct: 1044 SSVISLILRFYDPTSGRVLIDGKDITRLNLKSLRRHIGLVQQEPALFATSI 1094



 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 46/110 (41%), Positives = 65/110 (59%)
 Frame = +3

Query: 6   TKVAGDVGEALTKVDGNIEMRSVNFSYPSRPDIVIFKDFNLQVSASKSMALVXXXXXXXX 185
           +K +   G  L K++G+I+ ++V FSYPSRPD+ IF +  L + + K +ALV        
Sbjct: 349 SKSSSKTGRKLGKLEGHIQFKNVCFSYPSRPDVAIFNNLCLDIPSGKIIALVGGSGSGKS 408

Query: 186 XAISLILRFYDPTAGRVMIDGXXXXXXXXXXXXXFIGLVQQEPALFATSI 335
             ISLI RFY+P +G++++D               IGLV QEPALFATSI
Sbjct: 409 TVISLIERFYEPISGQILLDRNDIRELDLKWLRQQIGLVNQEPALFATSI 458


>ref|XP_002277547.1| PREDICTED: ABC transporter B family member 2 [Vitis vinifera]
            gi|297742073|emb|CBI33860.3| unnamed protein product
            [Vitis vinifera]
          Length = 1243

 Score =  127 bits (319), Expect = 9e-28
 Identities = 65/111 (58%), Positives = 77/111 (69%)
 Frame = +3

Query: 3    KTKVAGDVGEALTKVDGNIEMRSVNFSYPSRPDIVIFKDFNLQVSASKSMALVXXXXXXX 182
            KT+V GD GE LT+V+G I+++ + F YPSRPD+VIFKDF+L+V A KSMALV       
Sbjct: 981  KTEVMGDAGEELTRVEGTIDLKGIEFRYPSRPDVVIFKDFDLRVRAGKSMALVGQSGSGK 1040

Query: 183  XXAISLILRFYDPTAGRVMIDGXXXXXXXXXXXXXFIGLVQQEPALFATSI 335
               +SLILRFYDP AG+VMIDG              IGLVQQEPALFATSI
Sbjct: 1041 SSVLSLILRFYDPIAGKVMIDGKDIKKLKLKSLRKHIGLVQQEPALFATSI 1091



 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 47/103 (45%), Positives = 61/103 (59%)
 Frame = +3

Query: 27  GEALTKVDGNIEMRSVNFSYPSRPDIVIFKDFNLQVSASKSMALVXXXXXXXXXAISLIL 206
           G  L K++G+I+ R ++FSYPSRPDI+IF      + + K +ALV          ISLI 
Sbjct: 354 GRQLHKLEGHIQFRDISFSYPSRPDILIFNKLCFDIPSGKIVALVGGSGSGKSTVISLIE 413

Query: 207 RFYDPTAGRVMIDGXXXXXXXXXXXXXFIGLVQQEPALFATSI 335
           RFY+P AG +++DG              IGLV QEPALFATSI
Sbjct: 414 RFYEPLAGEILLDGNDIRQLDLQWLRQQIGLVNQEPALFATSI 456


>ref|XP_003517674.1| PREDICTED: ABC transporter B family member 2-like [Glycine max]
          Length = 1246

 Score =  126 bits (317), Expect = 2e-27
 Identities = 65/111 (58%), Positives = 78/111 (70%)
 Frame = +3

Query: 3    KTKVAGDVGEALTKVDGNIEMRSVNFSYPSRPDIVIFKDFNLQVSASKSMALVXXXXXXX 182
            K+ ++ +VGE L  VDG IE++ +NFSYPSRPD++IFKDFNL+V A KS+ALV       
Sbjct: 984  KSGISCEVGEELKTVDGTIELKRINFSYPSRPDVIIFKDFNLRVPAGKSVALVGQSGSGK 1043

Query: 183  XXAISLILRFYDPTAGRVMIDGXXXXXXXXXXXXXFIGLVQQEPALFATSI 335
               ISLILRFYDPT+GRV+IDG              IGLVQQEPALFATSI
Sbjct: 1044 SSVISLILRFYDPTSGRVLIDGKDITRLNLKSLRRHIGLVQQEPALFATSI 1094



 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 45/110 (40%), Positives = 65/110 (59%)
 Frame = +3

Query: 6   TKVAGDVGEALTKVDGNIEMRSVNFSYPSRPDIVIFKDFNLQVSASKSMALVXXXXXXXX 185
           +K +   G  L K++G+I+ +++ FSYPSRPD+ IF +  L + + K +ALV        
Sbjct: 349 SKSSSKTGRKLGKLEGHIQFKNICFSYPSRPDVAIFNNLCLDIPSGKIVALVGGSGSGKS 408

Query: 186 XAISLILRFYDPTAGRVMIDGXXXXXXXXXXXXXFIGLVQQEPALFATSI 335
             ISLI RFY+P +G++++D               IGLV QEPALFATSI
Sbjct: 409 TVISLIERFYEPLSGQILLDRNDIRELDLKWLRQQIGLVNQEPALFATSI 458


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