BLASTX nr result

ID: Cimicifuga21_contig00017523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017523
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136771.1| PREDICTED: Werner Syndrome-like exonuclease-...   119   3e-32
ref|XP_002527682.1| 3-5 exonuclease, putative [Ricinus communis]...   112   4e-30
ref|XP_002278250.1| PREDICTED: Werner Syndrome-like exonuclease ...   107   9e-30
emb|CBI32833.3| unnamed protein product [Vitis vinifera]              105   3e-28
emb|CAN60287.1| hypothetical protein VITISV_011782 [Vitis vinifera]   105   3e-28

>ref|XP_004136771.1| PREDICTED: Werner Syndrome-like exonuclease-like [Cucumis sativus]
           gi|449506025|ref|XP_004162631.1| PREDICTED: Werner
           Syndrome-like exonuclease-like [Cucumis sativus]
          Length = 210

 Score =  119 bits (297), Expect(2) = 3e-32
 Identities = 58/91 (63%), Positives = 68/91 (74%)
 Frame = +2

Query: 2   TVVTHTPSIVDQYISDXXXXXXXXXXXXXVGLDVEWRPNFNRNIENPVAILQLCVGRRCL 181
           T+VT +PS+VD +IS+             VGLDVEWRPNF+R+  NPVA LQLCVGRRCL
Sbjct: 30  TLVTASPSMVDMWISEILRIHRRRLHRLVVGLDVEWRPNFDRHFRNPVATLQLCVGRRCL 89

Query: 182 IFQLIHAATIPQSLIDFLNNPTFRFVGVGIE 274
           IFQLIHA+  PQSLIDFL + TF FVGVGI+
Sbjct: 90  IFQLIHASETPQSLIDFLEDDTFTFVGVGID 120



 Score = 44.7 bits (104), Expect(2) = 3e-32
 Identities = 22/40 (55%), Positives = 28/40 (70%)
 Frame = +3

Query: 342 IEEDVEKLLLDYHLRVANTVDIRGLAVRQLEMNELRNAGL 461
           I+ DV KL  DY L VANTVD+R LA  +++ +E R AGL
Sbjct: 119 IDNDVLKLYNDYDLNVANTVDLRELAADEMQSDEFRTAGL 158


>ref|XP_002527682.1| 3-5 exonuclease, putative [Ricinus communis]
           gi|223532913|gb|EEF34681.1| 3-5 exonuclease, putative
           [Ricinus communis]
          Length = 211

 Score =  112 bits (280), Expect(2) = 4e-30
 Identities = 54/91 (59%), Positives = 68/91 (74%)
 Frame = +2

Query: 2   TVVTHTPSIVDQYISDXXXXXXXXXXXXXVGLDVEWRPNFNRNIENPVAILQLCVGRRCL 181
           T+VTH+PS+V+Q++ +             VGLDVEWRPNF+R+IENPVA LQLC+G RCL
Sbjct: 29  TLVTHSPSLVEQWLIETQGQNNQTQPTI-VGLDVEWRPNFSRHIENPVATLQLCIGSRCL 87

Query: 182 IFQLIHAATIPQSLIDFLNNPTFRFVGVGIE 274
           I+QLIH+  IPQSL DFL N ++ F GVGIE
Sbjct: 88  IYQLIHSPRIPQSLFDFLKNSSYVFAGVGIE 118



 Score = 43.9 bits (102), Expect(2) = 4e-30
 Identities = 21/40 (52%), Positives = 28/40 (70%)
 Frame = +3

Query: 342 IEEDVEKLLLDYHLRVANTVDIRGLAVRQLEMNELRNAGL 461
           IE DVEKL+ DY L V N +++R +A   L + EL+NAGL
Sbjct: 117 IESDVEKLVEDYGLSVGNVMELRRVAAESLGVKELKNAGL 156


>ref|XP_002278250.1| PREDICTED: Werner Syndrome-like exonuclease [Vitis vinifera]
          Length = 213

 Score =  107 bits (266), Expect(2) = 9e-30
 Identities = 55/92 (59%), Positives = 64/92 (69%), Gaps = 1/92 (1%)
 Frame = +2

Query: 2   TVVTHTPSIVDQYISDXXXXXXXXXXXXX-VGLDVEWRPNFNRNIENPVAILQLCVGRRC 178
           T+VT+TP+IVD +I +              VGLDVEWRP+FN  IENPVA LQLCVGR C
Sbjct: 29  TLVTNTPNIVDSWIQNVESSNPHNGLDRLIVGLDVEWRPSFNPQIENPVATLQLCVGRSC 88

Query: 179 LIFQLIHAATIPQSLIDFLNNPTFRFVGVGIE 274
           LIFQL+HA  IP SL  FL NP + FVGVGI+
Sbjct: 89  LIFQLLHAPAIPASLNAFLRNPGYTFVGVGID 120



 Score = 48.1 bits (113), Expect(2) = 9e-30
 Identities = 23/40 (57%), Positives = 31/40 (77%)
 Frame = +3

Query: 342 IEEDVEKLLLDYHLRVANTVDIRGLAVRQLEMNELRNAGL 461
           I++D+EKL+ D+ L V+N VD+RGLA  +L   ELRNAGL
Sbjct: 119 IDDDLEKLVGDHGLGVSNAVDLRGLAAHELNKMELRNAGL 158


>emb|CBI32833.3| unnamed protein product [Vitis vinifera]
          Length = 208

 Score =  105 bits (263), Expect(2) = 3e-28
 Identities = 53/91 (58%), Positives = 62/91 (68%)
 Frame = +2

Query: 2   TVVTHTPSIVDQYISDXXXXXXXXXXXXXVGLDVEWRPNFNRNIENPVAILQLCVGRRCL 181
           T+VTH P +VD +I D             VGLD+EWRPN N    NPVAILQLCVGRRCL
Sbjct: 26  TLVTHVPHMVDSWIGDIEHIHRHRLHKLIVGLDIEWRPN-NARYTNPVAILQLCVGRRCL 84

Query: 182 IFQLIHAATIPQSLIDFLNNPTFRFVGVGIE 274
           IFQL++A  IP SLIDFL +  + FVGVGI+
Sbjct: 85  IFQLLYAPEIPTSLIDFLGDTDYTFVGVGIQ 115



 Score = 44.3 bits (103), Expect(2) = 3e-28
 Identities = 22/40 (55%), Positives = 28/40 (70%)
 Frame = +3

Query: 342 IEEDVEKLLLDYHLRVANTVDIRGLAVRQLEMNELRNAGL 461
           I+ D +KLL D++LRV N VD+  LA R L   ELRNAG+
Sbjct: 114 IQADSQKLLNDHNLRVGNVVDLAVLAARVLNTRELRNAGI 153


>emb|CAN60287.1| hypothetical protein VITISV_011782 [Vitis vinifera]
          Length = 208

 Score =  105 bits (263), Expect(2) = 3e-28
 Identities = 53/91 (58%), Positives = 62/91 (68%)
 Frame = +2

Query: 2   TVVTHTPSIVDQYISDXXXXXXXXXXXXXVGLDVEWRPNFNRNIENPVAILQLCVGRRCL 181
           T+VTH P +VD +I D             VGLD+EWRPN N    NPVAILQLCVGRRCL
Sbjct: 26  TLVTHVPHMVDSWIGDIEHIHRHRLHKLIVGLDIEWRPN-NARYTNPVAILQLCVGRRCL 84

Query: 182 IFQLIHAATIPQSLIDFLNNPTFRFVGVGIE 274
           IFQL++A  IP SLIDFL +  + FVGVGI+
Sbjct: 85  IFQLLYAPEIPTSLIDFLGDTDYTFVGVGIQ 115



 Score = 44.3 bits (103), Expect(2) = 3e-28
 Identities = 22/40 (55%), Positives = 28/40 (70%)
 Frame = +3

Query: 342 IEEDVEKLLLDYHLRVANTVDIRGLAVRQLEMNELRNAGL 461
           I+ D +KLL D++LRV N VD+  LA R L   ELRNAG+
Sbjct: 114 IQADSQKLLNDHNLRVGNVVDLAVLAARVLNTRELRNAGI 153


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