BLASTX nr result

ID: Cimicifuga21_contig00017518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017518
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276236.2| PREDICTED: ABC transporter C family member 8...   203   2e-50
ref|XP_002276212.2| PREDICTED: ABC transporter C family member 8...   196   2e-48
emb|CBI35971.3| unnamed protein product [Vitis vinifera]              196   2e-48
ref|XP_002276193.2| PREDICTED: ABC transporter C family member 8...   183   2e-44
ref|XP_002527423.1| multidrug resistance-associated protein 1, 3...   183   2e-44

>ref|XP_002276236.2| PREDICTED: ABC transporter C family member 8-like [Vitis vinifera]
          Length = 1465

 Score =  203 bits (516), Expect = 2e-50
 Identities = 101/205 (49%), Positives = 137/205 (66%), Gaps = 1/205 (0%)
 Frame = +2

Query: 14  SVCCAITSIAHFTACLWEILVKNESS-NLSWVVYVVRGLIWISLSVSLIFKRSKSTKXXX 190
           S+CCA+ SI + +A LW++ VKNE S +LSW  Y VRGL+WISL+ SL+ +R K  +   
Sbjct: 70  SICCAVVSIGYLSAGLWDLFVKNEGSGHLSWWAYFVRGLVWISLAASLLIQRPKCIRILS 129

Query: 191 XXXXXXXXXXXXXXXXEVLIKTHTIAILDAVSWFVNLLLLYCALRLFINLVTRNTSSQSL 370
                           E+L+KTH I + D V W V+ LLL+CA R   +  + +T  +S+
Sbjct: 130 SLWWLAFFLLGSALNIEILVKTHNIQVFDMVPWLVSFLLLFCAFRNICHHDSPDTPDRSV 189

Query: 371 AEPLLSSKEERSQSDLGKSNFLSRLTFSWLNPLLRLGHSKPLVFEDIPSVVSEDEALITY 550
           +EPLL  K E+S  +LGKS+F+S+LTFSW+NPLL LG+SKPLV EDIPS+VSED A + Y
Sbjct: 190 SEPLLGKKPEKSSVELGKSSFISKLTFSWINPLLCLGYSKPLVLEDIPSLVSEDGAELAY 249

Query: 551 QSFFSAWDLLPKKKSSGNSWNLVLK 625
           Q F  AW+ L K+K+  NS NLVL+
Sbjct: 250 QKFAHAWEQLQKEKTPNNSCNLVLQ 274


>ref|XP_002276212.2| PREDICTED: ABC transporter C family member 8-like [Vitis vinifera]
          Length = 1469

 Score =  196 bits (499), Expect = 2e-48
 Identities = 98/205 (47%), Positives = 136/205 (66%), Gaps = 1/205 (0%)
 Frame = +2

Query: 14  SVCCAITSIAHFTACLWEILVKNESSNLS-WVVYVVRGLIWISLSVSLIFKRSKSTKXXX 190
           S+CCA+ SI + +A  W++  KNE   LS W VY VRGLIWISL+VSL+ +RSK T+   
Sbjct: 70  SICCALISIGYLSAGFWDLYAKNEGPRLSSWPVYFVRGLIWISLTVSLLVQRSKWTRILS 129

Query: 191 XXXXXXXXXXXXXXXXEVLIKTHTIAILDAVSWFVNLLLLYCALRLFINLVTRNTSSQSL 370
                           E++++TH+I I   V W VN LLL+CA R     ++   S +S+
Sbjct: 130 SIWWMSFFLLVSALNIEIIVETHSIQIFVMVPWLVNFLLLFCAFRNICPSLSLEASDKSV 189

Query: 371 AEPLLSSKEERSQSDLGKSNFLSRLTFSWLNPLLRLGHSKPLVFEDIPSVVSEDEALITY 550
           +EPLL+    +S  D  KS+F+S+LTFSW+NPLLRLG+SKPLV EDIPS+  EDEA + Y
Sbjct: 190 SEPLLAKNPVKSSIDFSKSSFISKLTFSWINPLLRLGYSKPLVLEDIPSLTPEDEAELAY 249

Query: 551 QSFFSAWDLLPKKKSSGNSWNLVLK 625
           ++F  AW+LL ++K+S N+ NLVL+
Sbjct: 250 KNFAHAWELLQREKNSTNTSNLVLR 274


>emb|CBI35971.3| unnamed protein product [Vitis vinifera]
          Length = 2772

 Score =  196 bits (499), Expect = 2e-48
 Identities = 98/205 (47%), Positives = 136/205 (66%), Gaps = 1/205 (0%)
 Frame = +2

Query: 14   SVCCAITSIAHFTACLWEILVKNESSNLS-WVVYVVRGLIWISLSVSLIFKRSKSTKXXX 190
            S+CCA+ SI + +A  W++  KNE   LS W VY VRGLIWISL+VSL+ +RSK T+   
Sbjct: 1586 SICCALISIGYLSAGFWDLYAKNEGPRLSSWPVYFVRGLIWISLTVSLLVQRSKWTRILS 1645

Query: 191  XXXXXXXXXXXXXXXXEVLIKTHTIAILDAVSWFVNLLLLYCALRLFINLVTRNTSSQSL 370
                            E++++TH+I I   V W VN LLL+CA R     ++   S +S+
Sbjct: 1646 SIWWMSFFLLVSALNIEIIVETHSIQIFVMVPWLVNFLLLFCAFRNICPSLSLEASDKSV 1705

Query: 371  AEPLLSSKEERSQSDLGKSNFLSRLTFSWLNPLLRLGHSKPLVFEDIPSVVSEDEALITY 550
            +EPLL+    +S  D  KS+F+S+LTFSW+NPLLRLG+SKPLV EDIPS+  EDEA + Y
Sbjct: 1706 SEPLLAKNPVKSSIDFSKSSFISKLTFSWINPLLRLGYSKPLVLEDIPSLTPEDEAELAY 1765

Query: 551  QSFFSAWDLLPKKKSSGNSWNLVLK 625
            ++F  AW+LL ++K+S N+ NLVL+
Sbjct: 1766 KNFAHAWELLQREKNSTNTSNLVLR 1790



 Score =  173 bits (438), Expect = 3e-41
 Identities = 87/191 (45%), Positives = 127/191 (66%), Gaps = 2/191 (1%)
 Frame = +2

Query: 14  SVCCAITSIAHFTACLWEILVKNESSN-LSWVVYVVRGLIWISLSVSLIFKRSKSTKXXX 190
           S+CCA+T IA+ +A  W+++V+N  S  L W+VY VRGL WISL+VSL+ + SK ++   
Sbjct: 92  SICCALTGIAYVSAGFWDLVVRNGGSQPLGWLVYFVRGLTWISLAVSLLVRSSKWSRILS 151

Query: 191 XXXXXXXXXXXXXXXXEVLIKTHTIAILDAVSWFVNLLLLYCALRLFINLVTRNTS-SQS 367
                           E+L+KTH I I D V W VN LL++CA R   + V+ +T+  +S
Sbjct: 152 FLWWLTFFSLVSTLNIEILVKTHNIKIFDIVPWLVNSLLIFCAFRNIFHSVSEDTTPDKS 211

Query: 368 LAEPLLSSKEERSQSDLGKSNFLSRLTFSWLNPLLRLGHSKPLVFEDIPSVVSEDEALIT 547
            +EPLL+ K  R ++++GK +F+++LTFSW+NP+L LG+SKPLV ED+P + SEDEA + 
Sbjct: 212 ESEPLLAKKPVR-RTEVGKISFITKLTFSWINPILCLGNSKPLVLEDVPPLASEDEAELA 270

Query: 548 YQSFFSAWDLL 580
           YQ F  AW+ L
Sbjct: 271 YQKFSQAWEWL 281


>ref|XP_002276193.2| PREDICTED: ABC transporter C family member 8-like [Vitis vinifera]
          Length = 1462

 Score =  183 bits (465), Expect = 2e-44
 Identities = 92/206 (44%), Positives = 138/206 (66%), Gaps = 2/206 (0%)
 Frame = +2

Query: 14  SVCCAITSIAHFTACLWEILVKNESSN-LSWVVYVVRGLIWISLSVSLIFKRSKSTKXXX 190
           S+CCA+T IA+ +A  W+++V+N  S  L W+VY VRGL WISL+VSL+ + SK ++   
Sbjct: 70  SICCALTGIAYVSAGFWDLVVRNGGSQPLGWLVYFVRGLTWISLAVSLLVRSSKWSRILS 129

Query: 191 XXXXXXXXXXXXXXXXEVLIKTHTIAILDAVSWFVNLLLLYCALRLFINLVTRNTS-SQS 367
                           E+L+KTH I I D V W VN LL++CA R   + V+ +T+  +S
Sbjct: 130 FLWWLTFFSLVSTLNIEILVKTHNIKIFDIVPWLVNSLLIFCAFRNIFHSVSEDTTPDKS 189

Query: 368 LAEPLLSSKEERSQSDLGKSNFLSRLTFSWLNPLLRLGHSKPLVFEDIPSVVSEDEALIT 547
            +EPLL+ K  R ++++GK +F+++LTFSW+NP+L LG+SKPLV ED+P + SEDEA + 
Sbjct: 190 ESEPLLAKKPVR-RTEVGKISFITKLTFSWINPILCLGNSKPLVLEDVPPLASEDEAELA 248

Query: 548 YQSFFSAWDLLPKKKSSGNSWNLVLK 625
           YQ F  AW+ L +++SS ++ NLV +
Sbjct: 249 YQKFSQAWECLQRERSSSSTDNLVFR 274


>ref|XP_002527423.1| multidrug resistance-associated protein 1, 3 (mrp1, 3),
           abc-transoprter, putative [Ricinus communis]
           gi|223533233|gb|EEF34989.1| multidrug
           resistance-associated protein 1, 3 (mrp1, 3),
           abc-transoprter, putative [Ricinus communis]
          Length = 1475

 Score =  183 bits (465), Expect = 2e-44
 Identities = 96/208 (46%), Positives = 137/208 (65%), Gaps = 1/208 (0%)
 Frame = +2

Query: 5   VACSVCCAITSIAHFTACLWEILVKNESSN-LSWVVYVVRGLIWISLSVSLIFKRSKSTK 181
           V  S+CC + SIA+    LW+++ KN S N LSW+VY+VRG+IWIS++VSL+  RS+  +
Sbjct: 74  VVVSICCTLISIAYLGVGLWDLIAKNHSFNHLSWLVYLVRGIIWISVAVSLLVTRSRWNR 133

Query: 182 XXXXXXXXXXXXXXXXXXXEVLIKTHTIAILDAVSWFVNLLLLYCALRLFINLVTRNTSS 361
                              E+L + ++I +LD + W VN LLL CALR F +  ++  S 
Sbjct: 134 ILVTVWWVSFSLLASALNIEILARANSIQVLDILPWPVNFLLLLCALRNFSHFSSQQASY 193

Query: 362 QSLAEPLLSSKEERSQSDLGKSNFLSRLTFSWLNPLLRLGHSKPLVFEDIPSVVSEDEAL 541
           ++L EPLL +KE ++Q  L  ++FLS LTFSW+NPLL+LG+SKPL  EDIPS++ EDEA 
Sbjct: 194 KNLFEPLLGAKEVKNQK-LAHASFLSNLTFSWINPLLKLGYSKPLDDEDIPSLLPEDEAD 252

Query: 542 ITYQSFFSAWDLLPKKKSSGNSWNLVLK 625
           I YQ F  AWD L ++ +S ++ NLVL+
Sbjct: 253 IAYQKFAHAWDSLIRENNSNDTGNLVLE 280


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