BLASTX nr result
ID: Cimicifuga21_contig00017470
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00017470 (269 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003542747.1| PREDICTED: 50S ribosomal protein L21, mitoch... 96 3e-18 ref|XP_003529325.1| PREDICTED: 50S ribosomal protein L21, mitoch... 96 4e-18 ref|XP_002441501.1| hypothetical protein SORBIDRAFT_09g028120 [S... 95 5e-18 ref|NP_001132778.1| uncharacterized protein LOC100194267 [Zea ma... 94 1e-17 gb|ACF81771.1| unknown [Zea mays] gi|413946465|gb|AFW79114.1| 50... 94 1e-17 >ref|XP_003542747.1| PREDICTED: 50S ribosomal protein L21, mitochondrial-like [Glycine max] Length = 267 Score = 95.9 bits (237), Expect = 3e-18 Identities = 50/84 (59%), Positives = 57/84 (67%) Frame = +1 Query: 1 NDKLLLNKVLMVGSKSQTVIGRPILPDXXXXXXXXXXXLDAKVIIFXXXXXXXXXXXXGH 180 NDKL+LNKVL++GS SQT+IGRPI+PD LDAKVIIF GH Sbjct: 167 NDKLILNKVLLLGSASQTIIGRPIVPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGH 226 Query: 181 RQELTRLRITDIQGIEKPEKVAVE 252 RQELT+LRITDIQGIEKP+ V E Sbjct: 227 RQELTKLRITDIQGIEKPQNVLPE 250 >ref|XP_003529325.1| PREDICTED: 50S ribosomal protein L21, mitochondrial-like isoform 1 [Glycine max] Length = 262 Score = 95.5 bits (236), Expect = 4e-18 Identities = 49/84 (58%), Positives = 57/84 (67%) Frame = +1 Query: 1 NDKLLLNKVLMVGSKSQTVIGRPILPDXXXXXXXXXXXLDAKVIIFXXXXXXXXXXXXGH 180 NDKL+LNKVL++GS SQT++GRPI+PD LDAKVIIF GH Sbjct: 162 NDKLILNKVLLLGSASQTIVGRPIVPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGH 221 Query: 181 RQELTRLRITDIQGIEKPEKVAVE 252 RQELT+LRITDIQGIEKP+ V E Sbjct: 222 RQELTKLRITDIQGIEKPQNVLPE 245 >ref|XP_002441501.1| hypothetical protein SORBIDRAFT_09g028120 [Sorghum bicolor] gi|241946786|gb|EES19931.1| hypothetical protein SORBIDRAFT_09g028120 [Sorghum bicolor] Length = 250 Score = 95.1 bits (235), Expect = 5e-18 Identities = 50/85 (58%), Positives = 59/85 (69%) Frame = +1 Query: 1 NDKLLLNKVLMVGSKSQTVIGRPILPDXXXXXXXXXXXLDAKVIIFXXXXXXXXXXXXGH 180 NDKL+LN+VLM+GS++QTVIGRPILPD LDAKVIIF GH Sbjct: 166 NDKLVLNRVLMLGSQTQTVIGRPILPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGH 225 Query: 181 RQELTRLRITDIQGIEKPEKVAVEA 255 RQELT+LRIT+I+GI+KPE AV A Sbjct: 226 RQELTKLRITNIEGIDKPETAAVAA 250 >ref|NP_001132778.1| uncharacterized protein LOC100194267 [Zea mays] gi|195635625|gb|ACG37281.1| 50S ribosomal protein L21 [Zea mays] Length = 250 Score = 94.0 bits (232), Expect = 1e-17 Identities = 49/83 (59%), Positives = 58/83 (69%) Frame = +1 Query: 1 NDKLLLNKVLMVGSKSQTVIGRPILPDXXXXXXXXXXXLDAKVIIFXXXXXXXXXXXXGH 180 NDKL+LN+VLM+GS++QTVIGRPILPD LDAKVIIF GH Sbjct: 166 NDKLVLNRVLMLGSQAQTVIGRPILPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGH 225 Query: 181 RQELTRLRITDIQGIEKPEKVAV 249 RQELT+LRIT+I+GI+KPE AV Sbjct: 226 RQELTKLRITNIEGIDKPEAAAV 248 >gb|ACF81771.1| unknown [Zea mays] gi|413946465|gb|AFW79114.1| 50S ribosomal protein L21 [Zea mays] Length = 250 Score = 94.0 bits (232), Expect = 1e-17 Identities = 49/83 (59%), Positives = 58/83 (69%) Frame = +1 Query: 1 NDKLLLNKVLMVGSKSQTVIGRPILPDXXXXXXXXXXXLDAKVIIFXXXXXXXXXXXXGH 180 NDKL+LN+VLM+GS++QTVIGRPILPD LDAKVIIF GH Sbjct: 166 NDKLVLNRVLMLGSQAQTVIGRPILPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGH 225 Query: 181 RQELTRLRITDIQGIEKPEKVAV 249 RQELT+LRIT+I+GI+KPE AV Sbjct: 226 RQELTKLRITNIEGIDKPEAAAV 248