BLASTX nr result

ID: Cimicifuga21_contig00017470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017470
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542747.1| PREDICTED: 50S ribosomal protein L21, mitoch...    96   3e-18
ref|XP_003529325.1| PREDICTED: 50S ribosomal protein L21, mitoch...    96   4e-18
ref|XP_002441501.1| hypothetical protein SORBIDRAFT_09g028120 [S...    95   5e-18
ref|NP_001132778.1| uncharacterized protein LOC100194267 [Zea ma...    94   1e-17
gb|ACF81771.1| unknown [Zea mays] gi|413946465|gb|AFW79114.1| 50...    94   1e-17

>ref|XP_003542747.1| PREDICTED: 50S ribosomal protein L21, mitochondrial-like [Glycine
           max]
          Length = 267

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 50/84 (59%), Positives = 57/84 (67%)
 Frame = +1

Query: 1   NDKLLLNKVLMVGSKSQTVIGRPILPDXXXXXXXXXXXLDAKVIIFXXXXXXXXXXXXGH 180
           NDKL+LNKVL++GS SQT+IGRPI+PD           LDAKVIIF            GH
Sbjct: 167 NDKLILNKVLLLGSASQTIIGRPIVPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGH 226

Query: 181 RQELTRLRITDIQGIEKPEKVAVE 252
           RQELT+LRITDIQGIEKP+ V  E
Sbjct: 227 RQELTKLRITDIQGIEKPQNVLPE 250


>ref|XP_003529325.1| PREDICTED: 50S ribosomal protein L21, mitochondrial-like isoform 1
           [Glycine max]
          Length = 262

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 49/84 (58%), Positives = 57/84 (67%)
 Frame = +1

Query: 1   NDKLLLNKVLMVGSKSQTVIGRPILPDXXXXXXXXXXXLDAKVIIFXXXXXXXXXXXXGH 180
           NDKL+LNKVL++GS SQT++GRPI+PD           LDAKVIIF            GH
Sbjct: 162 NDKLILNKVLLLGSASQTIVGRPIVPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGH 221

Query: 181 RQELTRLRITDIQGIEKPEKVAVE 252
           RQELT+LRITDIQGIEKP+ V  E
Sbjct: 222 RQELTKLRITDIQGIEKPQNVLPE 245


>ref|XP_002441501.1| hypothetical protein SORBIDRAFT_09g028120 [Sorghum bicolor]
           gi|241946786|gb|EES19931.1| hypothetical protein
           SORBIDRAFT_09g028120 [Sorghum bicolor]
          Length = 250

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 50/85 (58%), Positives = 59/85 (69%)
 Frame = +1

Query: 1   NDKLLLNKVLMVGSKSQTVIGRPILPDXXXXXXXXXXXLDAKVIIFXXXXXXXXXXXXGH 180
           NDKL+LN+VLM+GS++QTVIGRPILPD           LDAKVIIF            GH
Sbjct: 166 NDKLVLNRVLMLGSQTQTVIGRPILPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGH 225

Query: 181 RQELTRLRITDIQGIEKPEKVAVEA 255
           RQELT+LRIT+I+GI+KPE  AV A
Sbjct: 226 RQELTKLRITNIEGIDKPETAAVAA 250


>ref|NP_001132778.1| uncharacterized protein LOC100194267 [Zea mays]
           gi|195635625|gb|ACG37281.1| 50S ribosomal protein L21
           [Zea mays]
          Length = 250

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 49/83 (59%), Positives = 58/83 (69%)
 Frame = +1

Query: 1   NDKLLLNKVLMVGSKSQTVIGRPILPDXXXXXXXXXXXLDAKVIIFXXXXXXXXXXXXGH 180
           NDKL+LN+VLM+GS++QTVIGRPILPD           LDAKVIIF            GH
Sbjct: 166 NDKLVLNRVLMLGSQAQTVIGRPILPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGH 225

Query: 181 RQELTRLRITDIQGIEKPEKVAV 249
           RQELT+LRIT+I+GI+KPE  AV
Sbjct: 226 RQELTKLRITNIEGIDKPEAAAV 248


>gb|ACF81771.1| unknown [Zea mays] gi|413946465|gb|AFW79114.1| 50S ribosomal
           protein L21 [Zea mays]
          Length = 250

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 49/83 (59%), Positives = 58/83 (69%)
 Frame = +1

Query: 1   NDKLLLNKVLMVGSKSQTVIGRPILPDXXXXXXXXXXXLDAKVIIFXXXXXXXXXXXXGH 180
           NDKL+LN+VLM+GS++QTVIGRPILPD           LDAKVIIF            GH
Sbjct: 166 NDKLVLNRVLMLGSQAQTVIGRPILPDAAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGH 225

Query: 181 RQELTRLRITDIQGIEKPEKVAV 249
           RQELT+LRIT+I+GI+KPE  AV
Sbjct: 226 RQELTKLRITNIEGIDKPEAAAV 248


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