BLASTX nr result

ID: Cimicifuga21_contig00017442 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017442
         (973 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265858.1| PREDICTED: DUF246 domain-containing protein ...   317   4e-84
ref|XP_003516276.1| PREDICTED: DUF246 domain-containing protein ...   307   3e-81
ref|XP_002522480.1| conserved hypothetical protein [Ricinus comm...   303   4e-80
ref|XP_003520091.1| PREDICTED: DUF246 domain-containing protein ...   301   1e-79
ref|XP_003529471.1| PREDICTED: DUF246 domain-containing protein ...   295   1e-77

>ref|XP_002265858.1| PREDICTED: DUF246 domain-containing protein At1g04910 [Vitis
           vinifera] gi|296087792|emb|CBI35048.3| unnamed protein
           product [Vitis vinifera]
          Length = 504

 Score =  317 bits (811), Expect = 4e-84
 Identities = 157/238 (65%), Positives = 182/238 (76%), Gaps = 2/238 (0%)
 Frame = +2

Query: 266 MEIRSDG-YQSRCDKVXXXXXXXXXXXXXXXXXLQIWFVRVCLSILAWTCLVQFVTVGEL 442
           ME+RS+G  Q RCDK+                 LQ+WF+RVC SIL WTCLVQ V VGEL
Sbjct: 1   MEVRSEGSLQVRCDKLPAPVIPRTR--------LQVWFIRVCSSILLWTCLVQLVAVGEL 52

Query: 443 WNPRVLTGLSNQIARITHFSLHSVETAPAPPIFP-PLRVYDSNGYLKVSCNGGLNQMRAA 619
           W+PR+LTG+S+ ++RIT + LH  +   +PP  P P R Y SNG+L+VSCNGGLNQMRAA
Sbjct: 53  WHPRLLTGISSHLSRITPYPLHVEKAILSPPPRPLPARSYQSNGFLRVSCNGGLNQMRAA 112

Query: 620 ICDMVTVARFLNLTLVVPELDKRSFWADPSNFGDIFDKNHFINSLRDEVRIIKRLPKKLG 799
           ICDMVTVARFLNLTLVVPELDK SFW+DPSNF DIFD  HFI SLRDEVRI+KRLPK+  
Sbjct: 113 ICDMVTVARFLNLTLVVPELDKTSFWSDPSNFEDIFDVRHFIESLRDEVRIVKRLPKRFS 172

Query: 800 RNLVDQPLVMPPVSWSNEKYYLQQVLPLFGKYKVIHFNKTDTRLANNGLPIELQRFRC 973
           R    + L MPPVSWSNEKYY +Q+LPLF KYKVI FNKTD RLANNGLP++LQ+ RC
Sbjct: 173 RKYGYKQLAMPPVSWSNEKYYSEQILPLFSKYKVIQFNKTDARLANNGLPLDLQKLRC 230


>ref|XP_003516276.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine
           max]
          Length = 506

 Score =  307 bits (786), Expect = 3e-81
 Identities = 154/239 (64%), Positives = 178/239 (74%), Gaps = 3/239 (1%)
 Frame = +2

Query: 266 MEIRSDGYQSRCDKVXXXXXXXXXXXXXXXXXLQIWFVRVCLSILAWTCLVQFVTVGELW 445
           ME+RS+G Q RCDK+                 L+IWF+RVC SI+ WTCLVQ VTV ELW
Sbjct: 1   MEVRSEGIQVRCDKLQSPVIPRTR--------LRIWFIRVCSSIVVWTCLVQLVTVSELW 52

Query: 446 NPRVLTGLSNQIARITHFSLHSVE---TAPAPPIFPPLRVYDSNGYLKVSCNGGLNQMRA 616
           +  +++G++N I  IT   L   E    A +PP+F P R Y SNG+L+VSCNGGLNQMRA
Sbjct: 53  HSHLISGITNGIYHITQVQLPIQEDNGVAQSPPVFLPPRNYTSNGFLRVSCNGGLNQMRA 112

Query: 617 AICDMVTVARFLNLTLVVPELDKRSFWADPSNFGDIFDKNHFINSLRDEVRIIKRLPKKL 796
           AICDMVTVARFLNLTLVVPELDK SFWADPSNF DIFD  HFI SLRDEVRI+KR+PKK 
Sbjct: 113 AICDMVTVARFLNLTLVVPELDKTSFWADPSNFEDIFDVKHFIYSLRDEVRIVKRVPKKF 172

Query: 797 GRNLVDQPLVMPPVSWSNEKYYLQQVLPLFGKYKVIHFNKTDTRLANNGLPIELQRFRC 973
                   L MPPVSWSNE YYL+Q+LPLFGK+KV+HFNKTDTRLANNGLP+ LQ+ RC
Sbjct: 173 SSKHGYATLEMPPVSWSNEIYYLEQILPLFGKHKVLHFNKTDTRLANNGLPLYLQKLRC 231


>ref|XP_002522480.1| conserved hypothetical protein [Ricinus communis]
           gi|223538365|gb|EEF39972.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 520

 Score =  303 bits (776), Expect = 4e-80
 Identities = 152/239 (63%), Positives = 175/239 (73%), Gaps = 3/239 (1%)
 Frame = +2

Query: 266 MEIRSDGYQSRCDKVXXXXXXXXXXXXXXXXXLQIWFVRVCLSILAWTCLVQFVTVGELW 445
           ME+RS+G   RCDKV                 LQ+WF+RVC SIL WT LVQ V VGELW
Sbjct: 1   MEVRSEGVPVRCDKVTNSQVIARTR-------LQVWFIRVCSSILLWTGLVQLVAVGELW 53

Query: 446 NPRVLTGLSNQIARITHFSLHSVETAPAPPIFPPL---RVYDSNGYLKVSCNGGLNQMRA 616
            P  ++  +++I++IT F LH     P PP  PPL   R Y SNG+LKVSCNGGLNQMRA
Sbjct: 54  RPNFISTFTHKISQITPFPLHLQLQPPPPPPPPPLLPARNYTSNGFLKVSCNGGLNQMRA 113

Query: 617 AICDMVTVARFLNLTLVVPELDKRSFWADPSNFGDIFDKNHFINSLRDEVRIIKRLPKKL 796
           AICDMV VAR LNLTLVVPELDK SFWADPSNF DIFD  HFI+SLRDEVRII+R+PK+ 
Sbjct: 114 AICDMVAVARLLNLTLVVPELDKTSFWADPSNFEDIFDVKHFIDSLRDEVRIIRRVPKRF 173

Query: 797 GRNLVDQPLVMPPVSWSNEKYYLQQVLPLFGKYKVIHFNKTDTRLANNGLPIELQRFRC 973
            R    +   MPPVSWSNEKYYLQQ+LPLF K KV+HFNKTD RLANNG+P++LQ+ RC
Sbjct: 174 NRKYGYKVFEMPPVSWSNEKYYLQQILPLFSKVKVLHFNKTDARLANNGIPVDLQKLRC 232


>ref|XP_003520091.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine
           max]
          Length = 506

 Score =  301 bits (772), Expect = 1e-79
 Identities = 149/239 (62%), Positives = 177/239 (74%), Gaps = 3/239 (1%)
 Frame = +2

Query: 266 MEIRSDGYQSRCDKVXXXXXXXXXXXXXXXXXLQIWFVRVCLSILAWTCLVQFVTVGELW 445
           ME+RS+G Q RCDK+                 L++WF+RVC SI+ WTCLVQ +TV ELW
Sbjct: 1   MEVRSEGIQVRCDKLQSSVIPRTR--------LRVWFIRVCSSIVVWTCLVQLMTVSELW 52

Query: 446 NPRVLTGLSNQIARITHFSLH---SVETAPAPPIFPPLRVYDSNGYLKVSCNGGLNQMRA 616
           +  +++G++N I  I    L        A +PP+  P R Y SNG+L+VSCNGGLNQMRA
Sbjct: 53  HSHLISGITNGIYHIAQVQLPIQGDNGVAQSPPVVLPPRNYTSNGFLRVSCNGGLNQMRA 112

Query: 617 AICDMVTVARFLNLTLVVPELDKRSFWADPSNFGDIFDKNHFINSLRDEVRIIKRLPKKL 796
           AICDMVTVARFLNLTLVVPELDK SFWADPSNF DIFD  HFI+SLRDEVRI+KR+PKK 
Sbjct: 113 AICDMVTVARFLNLTLVVPELDKTSFWADPSNFEDIFDVKHFIDSLRDEVRIVKRVPKKF 172

Query: 797 GRNLVDQPLVMPPVSWSNEKYYLQQVLPLFGKYKVIHFNKTDTRLANNGLPIELQRFRC 973
                   L MPPVSWSNEKYYL+Q+LPLF K+KV+HFNKTDTRLANNGLP++LQ+ RC
Sbjct: 173 SSKHGFSTLEMPPVSWSNEKYYLEQILPLFEKHKVLHFNKTDTRLANNGLPLDLQKLRC 231


>ref|XP_003529471.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine
           max]
          Length = 499

 Score =  295 bits (754), Expect = 1e-77
 Identities = 145/232 (62%), Positives = 171/232 (73%), Gaps = 1/232 (0%)
 Frame = +2

Query: 281 DGYQSRCDKVXXXXXXXXXXXXXXXXXLQIWFVRVCLSILAWTCLVQFVTVGELWNPRVL 460
           +G Q RCDK+                 L++WF+RVC SI+ WTCLVQ VTV ELW+    
Sbjct: 2   EGIQVRCDKLQGGVIQRSR--------LRVWFIRVCSSIVLWTCLVQLVTVSELWHSHFF 53

Query: 461 TGLSNQIARITHFSLHSV-ETAPAPPIFPPLRVYDSNGYLKVSCNGGLNQMRAAICDMVT 637
            G+S++I       L +  E A  PP F P R Y SNG+L+VSCNGGLNQMRAAICDMVT
Sbjct: 54  LGISSRIYHTNQSPLEAQNELAQPPPPFLPARNYTSNGFLRVSCNGGLNQMRAAICDMVT 113

Query: 638 VARFLNLTLVVPELDKRSFWADPSNFGDIFDKNHFINSLRDEVRIIKRLPKKLGRNLVDQ 817
           VAR LNLTLVVPELDK+SFWADPSNF DIFD  HFI+SL+DEVRI+KR+PK+  R     
Sbjct: 114 VARLLNLTLVVPELDKKSFWADPSNFEDIFDVRHFIDSLQDEVRIVKRVPKRFSRKSGYS 173

Query: 818 PLVMPPVSWSNEKYYLQQVLPLFGKYKVIHFNKTDTRLANNGLPIELQRFRC 973
            L MPPVSWSNEKYYL+Q+LPLFGK+KV+HFNKTD RLANNGLP++LQ+ RC
Sbjct: 174 TLKMPPVSWSNEKYYLEQILPLFGKHKVVHFNKTDARLANNGLPLDLQKLRC 225


Top