BLASTX nr result

ID: Cimicifuga21_contig00017406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017406
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524565.1| elongation factor ts, putative [Ricinus comm...   170   1e-40
ref|XP_002282316.1| PREDICTED: elongation factor Ts, mitochondri...   165   3e-39
ref|XP_002320543.1| predicted protein [Populus trichocarpa] gi|2...   163   2e-38
ref|NP_001234645.1| ethylene-responsive elongation factor EF-Ts ...   160   8e-38
ref|XP_004140737.1| PREDICTED: elongation factor Ts, mitochondri...   160   1e-37

>ref|XP_002524565.1| elongation factor ts, putative [Ricinus communis]
           gi|313118247|sp|B9SEZ6.1|EFTS_RICCO RecName:
           Full=Elongation factor Ts, mitochondrial; Short=EF-Ts;
           Short=EF-TsMt; Flags: Precursor
           gi|223536118|gb|EEF37773.1| elongation factor ts,
           putative [Ricinus communis]
          Length = 379

 Score =  170 bits (430), Expect = 1e-40
 Identities = 83/105 (79%), Positives = 99/105 (94%)
 Frame = -2

Query: 521 VAAKPLFISRDLVSSEALDSERDILKSQAESTGKPQMAIEKMVEGRMRKYMEEVVLMEQK 342
           VAAKPLF++++LVSS+AL+SER+ILKSQAESTGK QMAIEKMVEGR+RKY EEVVLMEQK
Sbjct: 266 VAAKPLFLTKELVSSDALESEREILKSQAESTGKSQMAIEKMVEGRLRKYYEEVVLMEQK 325

Query: 341 FVANDAVNIKTLINDLSKEVGSPVKVGKFFRMEVGEGIQRAETSN 207
           F+ NDAVN+KT++N+LSKEVGSPVK+G FFRMEVGEGIQR E ++
Sbjct: 326 FIINDAVNVKTVLNNLSKEVGSPVKIGSFFRMEVGEGIQRLEATS 370


>ref|XP_002282316.1| PREDICTED: elongation factor Ts, mitochondrial [Vitis vinifera]
           gi|297738982|emb|CBI28227.3| unnamed protein product
           [Vitis vinifera]
          Length = 378

 Score =  165 bits (418), Expect = 3e-39
 Identities = 80/105 (76%), Positives = 99/105 (94%)
 Frame = -2

Query: 521 VAAKPLFISRDLVSSEALDSERDILKSQAESTGKPQMAIEKMVEGRMRKYMEEVVLMEQK 342
           VAAKPLF++R+LVSSEA++SER+IL+SQAESTGK Q+AIEKMVEGR++KY+EEVVLMEQK
Sbjct: 265 VAAKPLFLTRELVSSEAMESEREILRSQAESTGKSQLAIEKMVEGRLKKYVEEVVLMEQK 324

Query: 341 FVANDAVNIKTLINDLSKEVGSPVKVGKFFRMEVGEGIQRAETSN 207
           FV ND++N+KT++N+LSKEVGS VK+G FFRMEVGEGIQR  TS+
Sbjct: 325 FVVNDSINVKTVLNNLSKEVGSSVKIGSFFRMEVGEGIQREGTSS 369


>ref|XP_002320543.1| predicted protein [Populus trichocarpa] gi|222861316|gb|EEE98858.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score =  163 bits (412), Expect = 2e-38
 Identities = 81/102 (79%), Positives = 95/102 (93%)
 Frame = -2

Query: 521 VAAKPLFISRDLVSSEALDSERDILKSQAESTGKPQMAIEKMVEGRMRKYMEEVVLMEQK 342
           VAAKPLF++++ VSS+AL+SER+ILKSQAESTGK QMAIEKMVEGR+RKY EEVVLMEQK
Sbjct: 210 VAAKPLFLTKEGVSSDALESEREILKSQAESTGKSQMAIEKMVEGRLRKYYEEVVLMEQK 269

Query: 341 FVANDAVNIKTLINDLSKEVGSPVKVGKFFRMEVGEGIQRAE 216
           FV ND +N+KTL+++LSKEVGSPVK+G FFRMEVGEGIQR E
Sbjct: 270 FVMNDTMNVKTLLSNLSKEVGSPVKIGNFFRMEVGEGIQREE 311


>ref|NP_001234645.1| ethylene-responsive elongation factor EF-Ts precursor [Solanum
           lycopersicum] gi|5669636|gb|AAD46403.1|AF096247_1
           ethylene-responsive elongation factor EF-Ts precursor
           [Solanum lycopersicum]
          Length = 391

 Score =  160 bits (406), Expect = 8e-38
 Identities = 76/105 (72%), Positives = 96/105 (91%)
 Frame = -2

Query: 521 VAAKPLFISRDLVSSEALDSERDILKSQAESTGKPQMAIEKMVEGRMRKYMEEVVLMEQK 342
           VAAKPLF++++ VSS+AL +ER+ILKSQAES+GKPQ+A+EKMVEGR+RKY EEVVLMEQK
Sbjct: 278 VAAKPLFLTKEDVSSDALSNEREILKSQAESSGKPQIAVEKMVEGRLRKYFEEVVLMEQK 337

Query: 341 FVANDAVNIKTLINDLSKEVGSPVKVGKFFRMEVGEGIQRAETSN 207
           F+ ND +N+KTL+++LSK+VGSPVK+G F RMEVGEG+QR E SN
Sbjct: 338 FIVNDTMNVKTLLSNLSKDVGSPVKIGSFLRMEVGEGLQRLEASN 382


>ref|XP_004140737.1| PREDICTED: elongation factor Ts, mitochondrial-like [Cucumis
           sativus]
          Length = 401

 Score =  160 bits (405), Expect = 1e-37
 Identities = 76/105 (72%), Positives = 98/105 (93%)
 Frame = -2

Query: 521 VAAKPLFISRDLVSSEALDSERDILKSQAESTGKPQMAIEKMVEGRMRKYMEEVVLMEQK 342
           VAAKPLF++++LV+S+AL++ER+ILKSQAE+TGK QMAIEKMVEGR+RKYMEEVVLMEQK
Sbjct: 288 VAAKPLFLTKELVASDALENEREILKSQAETTGKSQMAIEKMVEGRLRKYMEEVVLMEQK 347

Query: 341 FVANDAVNIKTLINDLSKEVGSPVKVGKFFRMEVGEGIQRAETSN 207
           F+ ND++N+KT++++LSKEVGSPVK+G F R+ VGEGI R ETS+
Sbjct: 348 FIINDSINVKTMLDNLSKEVGSPVKIGNFLRVGVGEGIDRLETSD 392


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