BLASTX nr result
ID: Cimicifuga21_contig00017402
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00017402
(521 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002519838.1| synaptonemal complex protein, putative [Rici... 118 1e-44
ref|XP_002329521.1| predicted protein [Populus trichocarpa] gi|2... 115 3e-44
ref|XP_004148732.1| PREDICTED: MND1-interacting protein 1-like [... 115 4e-43
ref|XP_003524049.1| PREDICTED: MND1-interacting protein 1-like [... 113 2e-42
ref|XP_002326714.1| predicted protein [Populus trichocarpa] gi|2... 114 3e-42
>ref|XP_002519838.1| synaptonemal complex protein, putative [Ricinus communis]
gi|223540884|gb|EEF42442.1| synaptonemal complex
protein, putative [Ricinus communis]
Length = 781
Score = 118 bits (296), Expect(2) = 1e-44
Identities = 62/113 (54%), Positives = 80/113 (70%), Gaps = 15/113 (13%)
Frame = +2
Query: 2 RVEEERRSKEATEVSAKRNTETLRRKIELDFQRHKDDIQRLEQELSRLRSAGDS------ 163
+VEEERRSKEA E S KR E LR KIE+DFQRHKDD+QRLEQELSRL+++ +S
Sbjct: 625 QVEEERRSKEAAEASNKRKLEALRLKIEIDFQRHKDDLQRLEQELSRLKASAESPDLNHQ 684
Query: 164 ---------DIAKAPSETNAKMLHGLNQLQDSSDKEVDYDRECMICMKDEVSV 295
+ K ET A++LH L++L+DSSDK + +R+C+ICMKDEVS+
Sbjct: 685 LSTLPSGKPEKTKPQGETIARLLHELDKLEDSSDKGANCERDCIICMKDEVSI 737
Score = 86.7 bits (213), Expect(2) = 1e-44
Identities = 37/47 (78%), Positives = 41/47 (87%)
Frame = +1
Query: 364 VSVVFLPCAHQVVCASCSQGYGKKGKTNCPCCRVQIEQRICIYGASS 504
VS+VFLPCAHQV+CASCS YGKKGK CPCCRV IEQRI ++GASS
Sbjct: 735 VSIVFLPCAHQVMCASCSDNYGKKGKATCPCCRVPIEQRIRVFGASS 781
>ref|XP_002329521.1| predicted protein [Populus trichocarpa] gi|222870230|gb|EEF07361.1|
predicted protein [Populus trichocarpa]
Length = 729
Score = 115 bits (289), Expect(2) = 3e-44
Identities = 63/112 (56%), Positives = 77/112 (68%), Gaps = 15/112 (13%)
Frame = +2
Query: 5 VEEERRSKEATEVSAKRNTETLRRKIELDFQRHKDDIQRLEQELSRLRSA---------- 154
VEEER +KEA E KR E LR KIE+DFQRHKDD+QRLEQE SRL+SA
Sbjct: 574 VEEERCAKEAAEAENKRKLEALRLKIEIDFQRHKDDLQRLEQEFSRLKSAAESTELNNQS 633
Query: 155 -----GDSDIAKAPSETNAKMLHGLNQLQDSSDKEVDYDRECMICMKDEVSV 295
G S+ AK ET A++LH L++L++SS+K + DRECMIC+KDEVSV
Sbjct: 634 NALPSGKSERAKPQGETIARLLHELDKLENSSEKGANCDRECMICLKDEVSV 685
Score = 87.8 bits (216), Expect(2) = 3e-44
Identities = 38/47 (80%), Positives = 41/47 (87%)
Frame = +1
Query: 364 VSVVFLPCAHQVVCASCSQGYGKKGKTNCPCCRVQIEQRICIYGASS 504
VSVVFLPCAHQV+CASCS YGKKGK CPCCRV IEQRI ++GASS
Sbjct: 683 VSVVFLPCAHQVICASCSDNYGKKGKATCPCCRVPIEQRIRVFGASS 729
>ref|XP_004148732.1| PREDICTED: MND1-interacting protein 1-like [Cucumis sativus]
gi|449521144|ref|XP_004167590.1| PREDICTED:
MND1-interacting protein 1-like [Cucumis sativus]
Length = 719
Score = 115 bits (288), Expect(2) = 4e-43
Identities = 61/114 (53%), Positives = 78/114 (68%), Gaps = 16/114 (14%)
Frame = +2
Query: 2 RVEEERRSKEATEVSAKRNTETLRRKIELDFQRHKDDIQRLEQELSRLRSA--------- 154
+VE+ER SKEA E S+KR E LR KIE+DFQRHKDD+QRLEQEL RL+++
Sbjct: 562 QVEDERHSKEAAEASSKRKLEALRLKIEIDFQRHKDDLQRLEQELLRLKASAQSTESHHP 621
Query: 155 -------GDSDIAKAPSETNAKMLHGLNQLQDSSDKEVDYDRECMICMKDEVSV 295
G+SD K ET AKML L+ +DSS+K+V+ DREC+ICM+ EVS+
Sbjct: 622 SNNNTPKGNSDSVKPQGETIAKMLRELDSYEDSSEKDVNQDRECIICMRGEVSI 675
Score = 84.7 bits (208), Expect(2) = 4e-43
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = +1
Query: 364 VSVVFLPCAHQVVCASCSQGYGKKGKTNCPCCRVQIEQRICIYGASS 504
VS+VFLPCAHQV+CASCS YGKKG+ CPCCRV IEQRI ++GASS
Sbjct: 673 VSIVFLPCAHQVLCASCSDNYGKKGRAACPCCRVTIEQRIRVFGASS 719
>ref|XP_003524049.1| PREDICTED: MND1-interacting protein 1-like [Glycine max]
Length = 733
Score = 113 bits (282), Expect(2) = 2e-42
Identities = 61/112 (54%), Positives = 78/112 (69%), Gaps = 15/112 (13%)
Frame = +2
Query: 5 VEEERRSKEATEVSAKRNTETLRRKIELDFQRHKDDIQRLEQELSRLRSA---------- 154
VEEER SKEA E + KR ETLR KIE+DFQRHKDD+ RLEQELSRL+++
Sbjct: 578 VEEERHSKEAAESNNKRKLETLRLKIEIDFQRHKDDLLRLEQELSRLKASAQSAELHNQS 637
Query: 155 -----GDSDIAKAPSETNAKMLHGLNQLQDSSDKEVDYDRECMICMKDEVSV 295
DS+ AK ET A++L L+ L+D S+KEV+ +REC++CMKDEVS+
Sbjct: 638 STSPTSDSEGAKPQRETIARLLQELDNLEDLSEKEVNSNRECIVCMKDEVSI 689
Score = 84.7 bits (208), Expect(2) = 2e-42
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = +1
Query: 364 VSVVFLPCAHQVVCASCSQGYGKKGKTNCPCCRVQIEQRICIYGASS 504
VS+VFLPCAHQV+CASCS YG+KGK CPCCRVQI+QRI ++GASS
Sbjct: 687 VSIVFLPCAHQVMCASCSDEYGRKGKAICPCCRVQIQQRIRVFGASS 733
>ref|XP_002326714.1| predicted protein [Populus trichocarpa] gi|222834036|gb|EEE72513.1|
predicted protein [Populus trichocarpa]
Length = 718
Score = 114 bits (285), Expect(2) = 3e-42
Identities = 61/112 (54%), Positives = 76/112 (67%), Gaps = 15/112 (13%)
Frame = +2
Query: 5 VEEERRSKEATEVSAKRNTETLRRKIELDFQRHKDDIQRLEQELSRLRSA---------- 154
VEEER SKEATE KR + LRRKIE+DFQRHKDD+QRLEQE SRL+SA
Sbjct: 563 VEEERCSKEATEAENKRKLDALRRKIEIDFQRHKDDLQRLEQEFSRLKSAAESTELNYQS 622
Query: 155 -----GDSDIAKAPSETNAKMLHGLNQLQDSSDKEVDYDRECMICMKDEVSV 295
G S+ K T A++LH + +L++SS+K + DR+CMICMKDEVS+
Sbjct: 623 NALPSGKSERTKPQGGTIARLLHEIEKLENSSEKGANCDRKCMICMKDEVSI 674
Score = 82.8 bits (203), Expect(2) = 3e-42
Identities = 34/47 (72%), Positives = 40/47 (85%)
Frame = +1
Query: 364 VSVVFLPCAHQVVCASCSQGYGKKGKTNCPCCRVQIEQRICIYGASS 504
VS+V LPCAHQV+CA+CS YGKKGK CPCCRV +EQRI ++GASS
Sbjct: 672 VSIVLLPCAHQVICANCSGNYGKKGKATCPCCRVPVEQRIRVFGASS 718