BLASTX nr result

ID: Cimicifuga21_contig00017369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017369
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_173367.1| ribosomal protein S14 [Nicotiana tabacum]             65   6e-09
dbj|BAD83430.2| ribosomal protein S14 (mitochondrion) [Nicotiana...    63   3e-08

>ref|YP_173367.1| ribosomal protein S14 [Nicotiana tabacum]
          Length = 119

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/36 (88%), Positives = 33/36 (91%)
 Frame = -3

Query: 337 FSWISISRFFDGHKEIVLVATTKPIEQGLALQLVHK 230
           FSWISISR FDGHKEIVLVATTKPIEQGLA Q V+K
Sbjct: 81  FSWISISRSFDGHKEIVLVATTKPIEQGLAPQQVYK 116


>dbj|BAD83430.2| ribosomal protein S14 (mitochondrion) [Nicotiana tabacum]
          Length = 119

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/36 (86%), Positives = 32/36 (88%)
 Frame = -3

Query: 337 FSWISISRFFDGHKEIVLVATTKPIEQGLALQLVHK 230
           FSWISISR FDGHKEIVLVAT KPIEQGLA Q V+K
Sbjct: 81  FSWISISRSFDGHKEIVLVATIKPIEQGLAPQQVYK 116


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