BLASTX nr result

ID: Cimicifuga21_contig00017338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017338
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002338651.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002521049.1| DNA binding protein, putative [Ricinus commu...    59   4e-07
ref|XP_002319885.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_003595439.1| hypothetical protein MTR_2g045480 [Medicago ...    59   4e-07
ref|XP_004159450.1| PREDICTED: uncharacterized LOC101215032 [Cuc...    59   5e-07

>ref|XP_002338651.1| predicted protein [Populus trichocarpa] gi|222873080|gb|EEF10211.1|
           predicted protein [Populus trichocarpa]
          Length = 143

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 6/84 (7%)
 Frame = -1

Query: 471 HCKP-----VGEGTCKTECNYCGKVMSGGGITRMKQHLAGG-SDVEECTKCGSEVRLLFR 310
           HC+      VG    K  C YC KV +GGGI R KQHLAG   +VE+C KC  +VR   +
Sbjct: 39  HCREALELSVGCKKTKLVCLYCAKVFAGGGINRFKQHLAGAKGEVEQCRKCPPDVR--HQ 96

Query: 309 ELLHKKRQSKSEKRLKEQKYAESN 238
            LL+ K  ++++K+++E + AE N
Sbjct: 97  MLLNLKGNAETKKKVREMQ-AEFN 119


>ref|XP_002521049.1| DNA binding protein, putative [Ricinus communis]
           gi|223539752|gb|EEF41333.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 854

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
 Frame = -1

Query: 471 HCKPVGEGT-CKTECNYCGKVMSGGGITRMKQHLAGGSDVEE-CTKCGSEVRLLFRELLH 298
           +C+P   G   + +CNYCGKV  GGGI R K+HLAG       C +  S+VRLL ++ LH
Sbjct: 133 YCQPSKYGDRVQIKCNYCGKVFKGGGIHRFKEHLAGRKGAAPICDRVPSDVRLLMQQCLH 192

Query: 297 K--KRQSKSEKRLKEQKYAESNALP 229
           +   +Q K +  ++E    +S  +P
Sbjct: 193 EVVPKQKKQKVVIEETINVDSPPVP 217


>ref|XP_002319885.1| predicted protein [Populus trichocarpa] gi|222858261|gb|EEE95808.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 6/79 (7%)
 Frame = -1

Query: 471 HCKPVGE---GTCKTE--CNYCGKVMSGGGITRMKQHLAGG-SDVEECTKCGSEVRLLFR 310
           HC+   E   G  KT+  C YC KV +GGGI R KQHLAG   +VE+C KC  +VR   +
Sbjct: 44  HCREAPELSVGCKKTKLVCLYCAKVFAGGGINRFKQHLAGAKGEVEQCRKCPPDVR--HQ 101

Query: 309 ELLHKKRQSKSEKRLKEQK 253
            +L+ K  ++++K+++E +
Sbjct: 102 MVLNLKGNAETKKKVREMQ 120


>ref|XP_003595439.1| hypothetical protein MTR_2g045480 [Medicago truncatula]
           gi|355484487|gb|AES65690.1| hypothetical protein
           MTR_2g045480 [Medicago truncatula]
          Length = 901

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 38/85 (44%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
 Frame = -1

Query: 441 KTECNYCGKVMSGGGITRMKQHLAGGS-DVEECTKCGSEVRLLFRELLHKKRQSKSEKRL 265
           K  CNYCGKV+S GGI R+KQHLA  S +V  C K   EV L  +E L   R +K +K++
Sbjct: 26  KVRCNYCGKVVS-GGIYRLKQHLARVSGEVTYCEKAPEEVYLKMKENLEGCRSNKKQKQV 84

Query: 264 KEQKYA--ESNALPDCFEQEGAKEE 196
             Q Y   +SN   D  EQ G + +
Sbjct: 85  DAQAYMNFQSNDDEDDEEQVGCRSK 109


>ref|XP_004159450.1| PREDICTED: uncharacterized LOC101215032 [Cucumis sativus]
          Length = 729

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 36/81 (44%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
 Frame = -1

Query: 459 VGEGTCKTECNYCGKVMSGGGITRMKQHLAG-GSDVEECTKCGSEVRLLFRELLHKKRQS 283
           V  G  K +C YC KVM GGGI+R+KQHLAG   +V  C +   EV++  ++LL  K   
Sbjct: 25  VNGGRQKIKCKYCNKVMLGGGISRLKQHLAGERGNVAPCEEVPEEVKVQIQQLLGFKVLE 84

Query: 282 KSEKRLKEQKYAESNALPDCF 220
           K    LK QK    NA+  CF
Sbjct: 85  K----LKRQKNGSKNAV-SCF 100


Top