BLASTX nr result

ID: Cimicifuga21_contig00017335 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017335
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6S5H8.1|TPC1_HORVU RecName: Full=Two pore calcium channel pr...   246   2e-63
sp|Q75VR1.1|TCP1A_TOBAC RecName: Full=Two pore calcium channel p...   241   6e-62
ref|XP_002874860.1| two-pore channel 1 [Arabidopsis lyrata subsp...   241   6e-62
dbj|BAD73470.1| putative two-pore calcium channel [Oryza sativa ...   240   1e-61
dbj|BAC80148.1| calcium channel [Oryza sativa Japonica Group]         240   1e-61

>sp|Q6S5H8.1|TPC1_HORVU RecName: Full=Two pore calcium channel protein 1; AltName:
           Full=Voltage-dependent calcium channel protein TPC1;
           Short=HvTPC1 gi|39545849|gb|AAR27998.1| two-pore calcium
           channel [Hordeum vulgare]
          Length = 742

 Score =  246 bits (627), Expect = 2e-63
 Identities = 118/185 (63%), Positives = 138/185 (74%)
 Frame = +1

Query: 1   AIYSVPFRIAPYIRIVFFVLNIRGLRACAVTLSGMLGMYXXXXXXXXXXXXXXXXXAYIF 180
           A  S PFR+APYIR+VF ++ IR LR CA+TL+G++G Y                 AY+ 
Sbjct: 191 AFSSQPFRLAPYIRVVFLIMTIRELRMCAITLAGLIGTYLNVLALSLLFLLFASWLAYVT 250

Query: 181 FEDTQQGLTMFYSYGATLYQMFVLFTTSNNPDAWIPAYKESRWYSLFFVIYVLLGVYFLT 360
           FEDT QG T+F SYG TLYQMFVLFTTSNNPD W+PAYK SRWYSLFF++YVLLGVYFLT
Sbjct: 251 FEDTPQGKTIFSSYGVTLYQMFVLFTTSNNPDVWVPAYKISRWYSLFFIVYVLLGVYFLT 310

Query: 361 NLILAVVYDSFKDQLVKQVAGEDAARKCIMEKAFSLIDNHKRGYLDIEQCVRLFEELNTY 540
           NLILAV+YDSFK+Q  KQ+   DA RK I++KAF LID + RGYLD EQC+ L  ELN Y
Sbjct: 311 NLILAVIYDSFKEQFAKQLVQVDAIRKNILQKAFELIDTNTRGYLDREQCISLLNELNKY 370

Query: 541 RSLPK 555
           RSLPK
Sbjct: 371 RSLPK 375


>sp|Q75VR1.1|TCP1A_TOBAC RecName: Full=Two pore calcium channel protein 1A; AltName:
           Full=Voltage-dependent calcium channel protein TPC1A;
           Short=NtTPC1A gi|46275792|dbj|BAD15099.1| two-pore
           calcium channel [Nicotiana tabacum]
          Length = 735

 Score =  241 bits (615), Expect = 6e-62
 Identities = 120/184 (65%), Positives = 138/184 (75%)
 Frame = +1

Query: 7   YSVPFRIAPYIRIVFFVLNIRGLRACAVTLSGMLGMYXXXXXXXXXXXXXXXXXAYIFFE 186
           Y +PFRIAPY+R+VFF+LNIR LR     L+GMLG Y                 AY+FFE
Sbjct: 183 YYLPFRIAPYLRVVFFILNIRELRDSFFILAGMLGTYLNVVALSALFLLFSSWLAYVFFE 242

Query: 187 DTQQGLTMFYSYGATLYQMFVLFTTSNNPDAWIPAYKESRWYSLFFVIYVLLGVYFLTNL 366
           DT+QG T F SYG TLYQMFVLFTTSNNPD WIPAYK+SRWY LFFV+YVLLGVYF+TNL
Sbjct: 243 DTRQGKTTFTSYGTTLYQMFVLFTTSNNPDVWIPAYKDSRWYCLFFVLYVLLGVYFVTNL 302

Query: 367 ILAVVYDSFKDQLVKQVAGEDAARKCIMEKAFSLIDNHKRGYLDIEQCVRLFEELNTYRS 546
           ILAVVYDSFK +LVKQVA +D  R   ++KAFSLID    G+L+ +QC  LFEELN YR+
Sbjct: 303 ILAVVYDSFKSELVKQVADKDRLRLRTLKKAFSLIDEANNGHLNEKQCTLLFEELNKYRT 362

Query: 547 LPKI 558
           LPKI
Sbjct: 363 LPKI 366


>ref|XP_002874860.1| two-pore channel 1 [Arabidopsis lyrata subsp. lyrata]
           gi|297320697|gb|EFH51119.1| two-pore channel 1
           [Arabidopsis lyrata subsp. lyrata]
          Length = 732

 Score =  241 bits (615), Expect = 6e-62
 Identities = 114/182 (62%), Positives = 140/182 (76%)
 Frame = +1

Query: 13  VPFRIAPYIRIVFFVLNIRGLRACAVTLSGMLGMYXXXXXXXXXXXXXXXXXAYIFFEDT 192
           +PFRIAPY+R++ F+L+IR LR   V LSGMLG Y                 A++ FEDT
Sbjct: 181 LPFRIAPYVRVILFILSIRELRHTLVLLSGMLGTYLNIVALWMLFLLFASWIAFVMFEDT 240

Query: 193 QQGLTMFYSYGATLYQMFVLFTTSNNPDAWIPAYKESRWYSLFFVIYVLLGVYFLTNLIL 372
           QQGLT+F SYG TLYQMF+LFTTSNNPD WIPAYK SRW S+FFV+YVL+GVYF+TNLIL
Sbjct: 241 QQGLTIFTSYGVTLYQMFILFTTSNNPDVWIPAYKSSRWSSVFFVLYVLIGVYFVTNLIL 300

Query: 373 AVVYDSFKDQLVKQVAGEDAARKCIMEKAFSLIDNHKRGYLDIEQCVRLFEELNTYRSLP 552
           AV+YDSFK+QL KQV+G D  ++ ++EKAF LID+ K G +D  QC++LFEELN YR+LP
Sbjct: 301 AVIYDSFKEQLAKQVSGMDQMKRRMLEKAFGLIDSDKNGEIDKNQCIKLFEELNNYRTLP 360

Query: 553 KI 558
           KI
Sbjct: 361 KI 362


>dbj|BAD73470.1| putative two-pore calcium channel [Oryza sativa Japonica Group]
          Length = 665

 Score =  240 bits (613), Expect = 1e-61
 Identities = 115/180 (63%), Positives = 135/180 (75%)
 Frame = +1

Query: 16  PFRIAPYIRIVFFVLNIRGLRACAVTLSGMLGMYXXXXXXXXXXXXXXXXXAYIFFEDTQ 195
           PFR+APYIR+ F ++NIR LR CAVTL GM+G Y                 AY+ FEDT 
Sbjct: 116 PFRVAPYIRVAFLIMNIRELRMCAVTLVGMVGTYLNVLALSLLFLLFASWLAYVTFEDTP 175

Query: 196 QGLTMFYSYGATLYQMFVLFTTSNNPDAWIPAYKESRWYSLFFVIYVLLGVYFLTNLILA 375
           QG T+F SYG TLYQMF+LFTTSNNPD W+PAYK SRW SLFF++YVLLGVYFLTNLILA
Sbjct: 176 QGKTVFSSYGTTLYQMFILFTTSNNPDVWVPAYKSSRWSSLFFIVYVLLGVYFLTNLILA 235

Query: 376 VVYDSFKDQLVKQVAGEDAARKCIMEKAFSLIDNHKRGYLDIEQCVRLFEELNTYRSLPK 555
           V+YDSFK+QL KQV+  D  RK I+EKAF +ID   +GYL+ EQC+ L +ELN YRSLPK
Sbjct: 236 VIYDSFKEQLAKQVSQADCTRKSILEKAFGIIDATGQGYLNKEQCLSLLDELNKYRSLPK 295


>dbj|BAC80148.1| calcium channel [Oryza sativa Japonica Group]
          Length = 757

 Score =  240 bits (613), Expect = 1e-61
 Identities = 115/180 (63%), Positives = 135/180 (75%)
 Frame = +1

Query: 16  PFRIAPYIRIVFFVLNIRGLRACAVTLSGMLGMYXXXXXXXXXXXXXXXXXAYIFFEDTQ 195
           PFR+APYIR+ F ++NIR LR CAVTL GM+G Y                 AY+ FEDT 
Sbjct: 208 PFRVAPYIRVAFLIMNIRELRMCAVTLVGMVGTYLNVLALSLLFLLFASWLAYVTFEDTP 267

Query: 196 QGLTMFYSYGATLYQMFVLFTTSNNPDAWIPAYKESRWYSLFFVIYVLLGVYFLTNLILA 375
           QG T+F SYG TLYQMF+LFTTSNNPD W+PAYK SRW SLFF++YVLLGVYFLTNLILA
Sbjct: 268 QGKTVFSSYGTTLYQMFILFTTSNNPDVWVPAYKSSRWSSLFFIVYVLLGVYFLTNLILA 327

Query: 376 VVYDSFKDQLVKQVAGEDAARKCIMEKAFSLIDNHKRGYLDIEQCVRLFEELNTYRSLPK 555
           V+YDSFK+QL KQV+  D  RK I+EKAF +ID   +GYL+ EQC+ L +ELN YRSLPK
Sbjct: 328 VIYDSFKEQLAKQVSQADCTRKSILEKAFGIIDATGQGYLNKEQCLSLLDELNKYRSLPK 387


Top