BLASTX nr result

ID: Cimicifuga21_contig00017302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017302
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631222.1| PREDICTED: uncharacterized protein LOC100243...    74   3e-11
ref|XP_002312395.1| predicted protein [Populus trichocarpa] gi|2...    66   5e-09
ref|XP_003631223.1| PREDICTED: protein NIM1-INTERACTING 2-like [...    63   5e-08
gb|ABK96493.1| unknown [Populus trichocarpa x Populus deltoides]       62   1e-07
ref|XP_002531636.1| conserved hypothetical protein [Ricinus comm...    56   7e-06

>ref|XP_003631222.1| PREDICTED: uncharacterized protein LOC100243974 [Vitis vinifera]
           gi|147785689|emb|CAN70911.1| hypothetical protein
           VITISV_043913 [Vitis vinifera]
          Length = 121

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 44/109 (40%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
 Frame = +3

Query: 72  MDSEKRKRQAKGAIDSKKPKASRE-DTGDQMKIEDEVEEFFAIIRRIHSADNYTQKNNVH 248
           M++EKRK +    +    PK +R+ D G+    +DEVEEF+AI+RRIH+A  Y +K    
Sbjct: 1   MEAEKRKNKENDIVSGPTPKKARDLDPGETAVNDDEVEEFYAILRRIHAAVTYFEKGTGD 60

Query: 249 GRKLTEKESSRKLMFEWEDFEDPDGVKSPE-KREEGVEENMLIDLNADP 392
           GR+   K S  +   E E  E+  G    + KR E VEEN+  DLN +P
Sbjct: 61  GRRSPVKGSKWRQGLEKEILEEVKGAGGEKLKRIEDVEENVGFDLNVNP 109


>ref|XP_002312395.1| predicted protein [Populus trichocarpa] gi|222852215|gb|EEE89762.1|
           predicted protein [Populus trichocarpa]
          Length = 115

 Score = 66.2 bits (160), Expect = 5e-09
 Identities = 46/112 (41%), Positives = 63/112 (56%), Gaps = 7/112 (6%)
 Frame = +3

Query: 78  SEKRKRQAKGAIDSKKP---KASREDTGDQMKIED----EVEEFFAIIRRIHSADNYTQK 236
           SE +KR+ +G ++ K P   K ++ED G Q +  +    EV+EFFAI+ RIH A  Y ++
Sbjct: 2   SEAKKRK-QGELNDKVPDAQKKAQEDNGGQRQTAEATNAEVDEFFAILERIHVAVKYFKE 60

Query: 237 NNVHGRKLTEKESSRKLMFEWEDFEDPDGVKSPEKREEGVEENMLIDLNADP 392
            N  GR L E  S    +    + E      S  K+EEGVEEN+  DLNADP
Sbjct: 61  ANEDGRNLAEVRSLESGL----EVEGSGMKVSDIKKEEGVEENVGFDLNADP 108


>ref|XP_003631223.1| PREDICTED: protein NIM1-INTERACTING 2-like [Vitis vinifera]
          Length = 103

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 45/109 (41%), Positives = 61/109 (55%), Gaps = 2/109 (1%)
 Frame = +3

Query: 72  MDSEKRKRQAKGAIDSKKPKASREDTGDQMKIEDEVEEFFAIIRRIHSADNYTQKNNVHG 251
           M+S KRK+   G I+          T ++   E+EVEEFFAI+RRIH A  Y + +N  G
Sbjct: 1   MESGKRKQPEDGNINV---------TTEKEVTEEEVEEFFAILRRIHVAVKYFENSNGPG 51

Query: 252 RKLTEKESSRKLMFEWEDFE-DPDGVK-SPEKREEGVEENMLIDLNADP 392
                 + S    FE EDF+ + + VK   +K+EEGVEEN  +DLN  P
Sbjct: 52  MAAKRWKPS----FEREDFQVEANDVKIGKKKKEEGVEENKGLDLNVGP 96


>gb|ABK96493.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 115

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 44/112 (39%), Positives = 62/112 (55%), Gaps = 7/112 (6%)
 Frame = +3

Query: 78  SEKRKRQAKGAIDSKKP---KASREDTGDQMKIED----EVEEFFAIIRRIHSADNYTQK 236
           SE +KR+ +G ++ K P   K ++ED G Q +  +    EV+EFFAI+ RIH A  Y ++
Sbjct: 2   SEAKKRK-QGELNDKVPDAQKKAQEDNGGQRQTAEATNAEVDEFFAILERIHVAVKYFEE 60

Query: 237 NNVHGRKLTEKESSRKLMFEWEDFEDPDGVKSPEKREEGVEENMLIDLNADP 392
            +   R L E  S    +    + E      S  K+EEGVEEN+  DLNADP
Sbjct: 61  AHEDRRNLAEVRSLESGL----EVEGSGMKVSDIKKEEGVEENVGFDLNADP 108


>ref|XP_002531636.1| conserved hypothetical protein [Ricinus communis]
           gi|223528754|gb|EEF30764.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 108

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 43/112 (38%), Positives = 55/112 (49%), Gaps = 5/112 (4%)
 Frame = +3

Query: 72  MDSEKRKRQAKGAIDSKKPKASREDTGDQMKIEDEVEEFFAIIRRIHSADNYTQKNNVHG 251
           M +EKRKR+  G          +E  G  +  +DEVEEFF I+RRIH A  Y + NN   
Sbjct: 1   MKAEKRKRETDG----------KEVVGAPVD-DDEVEEFFTILRRIHVAVKYFENNNNRS 49

Query: 252 RKLTEKESSRKLMFEWEDFEDPDGVK-----SPEKREEGVEENMLIDLNADP 392
            K   K    +  FE E  ED +  +       EK E  V EN  +DLN+DP
Sbjct: 50  SKNNCKRWKTR-SFEKEVIEDVNSGRVELRWRKEKEESFVGENTGLDLNSDP 100


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