BLASTX nr result

ID: Cimicifuga21_contig00017234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017234
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279830.1| PREDICTED: uncharacterized protein LOC100245...   128   8e-28
emb|CBI37739.3| unnamed protein product [Vitis vinifera]              127   1e-27
ref|XP_002312802.1| bromodomain protein [Populus trichocarpa] gi...   115   7e-24
ref|XP_002328271.1| bromodomain protein [Populus trichocarpa] gi...   114   2e-23
ref|XP_002272566.2| PREDICTED: uncharacterized protein LOC100244...   113   4e-23

>ref|XP_002279830.1| PREDICTED: uncharacterized protein LOC100245230 [Vitis vinifera]
          Length = 750

 Score =  128 bits (322), Expect = 8e-28
 Identities = 67/138 (48%), Positives = 91/138 (65%), Gaps = 15/138 (10%)
 Frame = -1

Query: 645 VGSQSSVLNTFDGETKQLLPVGLHTEHGYARSLARFAANLGPVAWKVASKKIARSLPPGM 466
           VG + SVL TFDGE KQL+PVGL+ E+GYARSLARFA+NLGPVAWK+A+KKI +SLPPG+
Sbjct: 414 VGREPSVLTTFDGEKKQLMPVGLNAEYGYARSLARFASNLGPVAWKIAAKKIEKSLPPGV 473

Query: 465 KFGPGWVGDDEAPPAQ---------MTSLPTPSSSCSFPSIQTSPRIE------PRGDML 331
           KFGPGWVG+++  P +         ++SLP  S  CS  S +  P  +      P  ++L
Sbjct: 474 KFGPGWVGENDVIPPKPLFVPSSTPLSSLPGDSIPCSMDSQEDKPSQKTGGIGLPERNVL 533

Query: 330 FQESSLDGYPNSRPIHSS 277
              ++L  +P    + S+
Sbjct: 534 SARAALANHPGKSLLTSA 551


>emb|CBI37739.3| unnamed protein product [Vitis vinifera]
          Length = 4608

 Score =  127 bits (320), Expect = 1e-27
 Identities = 62/105 (59%), Positives = 78/105 (74%), Gaps = 9/105 (8%)
 Frame = -1

Query: 645  VGSQSSVLNTFDGETKQLLPVGLHTEHGYARSLARFAANLGPVAWKVASKKIARSLPPGM 466
            VG + SVL TFDGE KQL+PVGL+ E+GYARSLARFA+NLGPVAWK+A+KKI +SLPPG+
Sbjct: 4485 VGREPSVLTTFDGEKKQLMPVGLNAEYGYARSLARFASNLGPVAWKIAAKKIEKSLPPGV 4544

Query: 465  KFGPGWVGDDEAPPAQ---------MTSLPTPSSSCSFPSIQTSP 358
            KFGPGWVG+++  P +         ++SLP  S  CS  S +  P
Sbjct: 4545 KFGPGWVGENDVIPPKPLFVPSSTPLSSLPGDSIPCSMDSQEDKP 4589


>ref|XP_002312802.1| bromodomain protein [Populus trichocarpa]
           gi|222849210|gb|EEE86757.1| bromodomain protein [Populus
           trichocarpa]
          Length = 758

 Score =  115 bits (288), Expect = 7e-24
 Identities = 56/96 (58%), Positives = 70/96 (72%), Gaps = 1/96 (1%)
 Frame = -1

Query: 654 PSVVGSQSSVLNTFDGETKQLLPVGLHTEHGYARSLARFAANLGPVAWKVASKKIARSLP 475
           PS  G   SVL TFD E KQL+ VGL TEHGYARS+ARFAAN+GP +W +A K+I +SL 
Sbjct: 398 PSAGGRVPSVLTTFDAERKQLVAVGLLTEHGYARSIARFAANIGPFSWTIAVKRIEKSLA 457

Query: 474 PGMKFGPGWVGDDEAPPAQ-MTSLPTPSSSCSFPSI 370
           PG+KFGPGWVG+++ PP + + S P PS     PS+
Sbjct: 458 PGVKFGPGWVGENDIPPQKALFSSPMPSQLAPPPSL 493


>ref|XP_002328271.1| bromodomain protein [Populus trichocarpa]
           gi|222837786|gb|EEE76151.1| bromodomain protein [Populus
           trichocarpa]
          Length = 546

 Score =  114 bits (284), Expect = 2e-23
 Identities = 55/99 (55%), Positives = 67/99 (67%)
 Frame = -1

Query: 654 PSVVGSQSSVLNTFDGETKQLLPVGLHTEHGYARSLARFAANLGPVAWKVASKKIARSLP 475
           PS  G   SVL TFD E KQL+ VGL TEHGYARS+ARFAAN+GP +W +A KKI RSL 
Sbjct: 406 PSAGGRVPSVLTTFDAERKQLVAVGLLTEHGYARSIARFAANIGPFSWTIAVKKIERSLA 465

Query: 474 PGMKFGPGWVGDDEAPPAQMTSLPTPSSSCSFPSIQTSP 358
           PG+KFGPGWVG+++  P +      P S  + P +   P
Sbjct: 466 PGIKFGPGWVGENDITPQRPLFSSPPPSQPALPPLPQRP 504


>ref|XP_002272566.2| PREDICTED: uncharacterized protein LOC100244510 [Vitis vinifera]
          Length = 691

 Score =  113 bits (282), Expect = 4e-23
 Identities = 90/221 (40%), Positives = 112/221 (50%), Gaps = 12/221 (5%)
 Frame = -1

Query: 654  PSVVGSQSSVLNTFDGETKQLLPVGLHTEHGYARSLARFAANLGPVAWKVASKKIARSLP 475
            P     + SVL T  GE KQL+ VGLH++HGYARSLARFAA+LG   WK+A+KKIA  LP
Sbjct: 399  PLASNHEPSVLTTLHGELKQLMSVGLHSDHGYARSLARFAADLGQDVWKIAAKKIANVLP 458

Query: 474  PGMKFGPGWVGDDEAPPAQMTSLPTPSSSCSFPSIQTSPRIEP--RGDMLF--QESSLDG 307
             G++FGPGWVG++EA  AQ  SL   +   S  S    P+  P   G  LF    SSL  
Sbjct: 459  VGVEFGPGWVGENEA-LAQRPSLLCENQKSSNNSTPPHPQPPPTTSGSSLFVANRSSLPC 517

Query: 306  YPNS----RPIHSSFTCTSRCPEPAEATDXXXXXXXXXXXPFQIHQ----RPGMNXXXXX 151
               S    R ++S    TSR P P E                 IHQ     PG+N     
Sbjct: 518  KEESGEAVRGLNSQIELTSR-PAPPE-----------------IHQTLGIHPGLN-GFSG 558

Query: 150  XXXSHLSSQMGKLVVGPGGSMNSDTSVHSRILDMVSKSNFI 28
                + SSQMG   +      +S  S+ S+ L MVS S+ I
Sbjct: 559  GFGFNPSSQMGMARLAMLAGNSSTESMPSQKLGMVSNSSSI 599


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