BLASTX nr result

ID: Cimicifuga21_contig00017207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017207
         (669 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22472.3| unnamed protein product [Vitis vinifera]              238   8e-61
ref|XP_002263779.1| PREDICTED: histone deacetylase 6-like [Vitis...   237   1e-60
ref|XP_002313903.1| predicted protein [Populus trichocarpa] gi|1...   235   7e-60
ref|XP_004152271.1| PREDICTED: histone deacetylase 6-like [Cucum...   233   3e-59
ref|XP_002527496.1| histone deacetylase hda2, putative [Ricinus ...   232   4e-59

>emb|CBI22472.3| unnamed protein product [Vitis vinifera]
          Length = 153

 Score =  238 bits (607), Expect = 8e-61
 Identities = 105/143 (73%), Positives = 124/143 (86%)
 Frame = +1

Query: 166 MTSKAAPSSSAAFEGVEEEEFMYGAGSGWVEARTSCDHLNTLSSDLSHIPTPDTPCTRCQ 345
           M ++A+ SS+A    +E+EEF+YGA SGWVEARTSCDHL +LSSDL HIPTP+TPC RC 
Sbjct: 1   MANQASSSSTALEVLIEDEEFLYGAESGWVEARTSCDHLASLSSDLVHIPTPETPCNRCH 60

Query: 346 HPAENWLCLCCKDVFCSRFVNKHMLQHYQESKHCLALSYSDLSVWCFSCDAYLDVQAILQ 525
           +P+ENWLCLCCK+V CSRFVNKHML+HYQ+  HCLALSYSDLS+WCFSCDAYLD QAILQ
Sbjct: 61  NPSENWLCLCCKEVLCSRFVNKHMLEHYQKVNHCLALSYSDLSIWCFSCDAYLDAQAILQ 120

Query: 526 LRPVYEIAHLLKFGEAPPFRTIE 594
           L PVYE A++LKFG+APPF T +
Sbjct: 121 LHPVYETAYILKFGQAPPFPTTD 143


>ref|XP_002263779.1| PREDICTED: histone deacetylase 6-like [Vitis vinifera]
          Length = 154

 Score =  237 bits (605), Expect = 1e-60
 Identities = 106/144 (73%), Positives = 125/144 (86%), Gaps = 1/144 (0%)
 Frame = +1

Query: 166 MTSKAAPSSSAAFEG-VEEEEFMYGAGSGWVEARTSCDHLNTLSSDLSHIPTPDTPCTRC 342
           M ++A+ SS+A  E  +E+EEF+YGA SGWVEARTSCDHL +LSSDL HIPTP+TPC RC
Sbjct: 1   MANQASSSSTALVEVLIEDEEFLYGAESGWVEARTSCDHLASLSSDLVHIPTPETPCNRC 60

Query: 343 QHPAENWLCLCCKDVFCSRFVNKHMLQHYQESKHCLALSYSDLSVWCFSCDAYLDVQAIL 522
            +P+ENWLCLCCK+V CSRFVNKHML+HYQ+  HCLALSYSDLS+WCFSCDAYLD QAIL
Sbjct: 61  HNPSENWLCLCCKEVLCSRFVNKHMLEHYQKVNHCLALSYSDLSIWCFSCDAYLDAQAIL 120

Query: 523 QLRPVYEIAHLLKFGEAPPFRTIE 594
           QL PVYE A++LKFG+APPF T +
Sbjct: 121 QLHPVYETAYILKFGQAPPFPTTD 144


>ref|XP_002313903.1| predicted protein [Populus trichocarpa] gi|118483848|gb|ABK93815.1|
           unknown [Populus trichocarpa]
           gi|222850311|gb|EEE87858.1| predicted protein [Populus
           trichocarpa]
          Length = 160

 Score =  235 bits (599), Expect = 7e-60
 Identities = 106/145 (73%), Positives = 125/145 (86%), Gaps = 2/145 (1%)
 Frame = +1

Query: 166 MTSKAAPSSSAAFE-GVEEEEF-MYGAGSGWVEARTSCDHLNTLSSDLSHIPTPDTPCTR 339
           M ++A  SSSA  E G E++E  MYGA SGWVEARTSCDHL +LSSDL+HIPTPDTPC R
Sbjct: 1   MANQAGASSSAPLEPGFEDDENDMYGAESGWVEARTSCDHLASLSSDLAHIPTPDTPCNR 60

Query: 340 CQHPAENWLCLCCKDVFCSRFVNKHMLQHYQESKHCLALSYSDLSVWCFSCDAYLDVQAI 519
           CQHP+ENWLCL CKDV CSRFVNKHMLQH+ ++ HCLALSYSDLS+WCF+CD+YLD + I
Sbjct: 61  CQHPSENWLCLSCKDVLCSRFVNKHMLQHFHQTSHCLALSYSDLSIWCFACDSYLDARVI 120

Query: 520 LQLRPVYEIAHLLKFGEAPPFRTIE 594
           +QL+PV E AH+LKFGEAPPFR++E
Sbjct: 121 IQLKPVSETAHILKFGEAPPFRSVE 145


>ref|XP_004152271.1| PREDICTED: histone deacetylase 6-like [Cucumis sativus]
           gi|449484341|ref|XP_004156856.1| PREDICTED: histone
           deacetylase 6-like [Cucumis sativus]
          Length = 146

 Score =  233 bits (593), Expect = 3e-59
 Identities = 105/146 (71%), Positives = 121/146 (82%), Gaps = 6/146 (4%)
 Frame = +1

Query: 166 MTSKAAPSSSAA------FEGVEEEEFMYGAGSGWVEARTSCDHLNTLSSDLSHIPTPDT 327
           M  KA  SSS +       E   EEE +YGAGSGWV+A TSCDHL +LSSDL+HIP P T
Sbjct: 1   MAEKAGSSSSTSNPLTLIIEDEVEEELLYGAGSGWVQALTSCDHLASLSSDLAHIPPPQT 60

Query: 328 PCTRCQHPAENWLCLCCKDVFCSRFVNKHMLQHYQESKHCLALSYSDLSVWCFSCDAYLD 507
           PC++CQ+P ENW+CLCCKDVFCSRFVNKHMLQHY++S HCLALSYSDLSVWCFSCDAYLD
Sbjct: 61  PCSQCQNPKENWVCLCCKDVFCSRFVNKHMLQHYEQSTHCLALSYSDLSVWCFSCDAYLD 120

Query: 508 VQAILQLRPVYEIAHLLKFGEAPPFR 585
            Q I +LRPV+E+A++LKFGEAPPFR
Sbjct: 121 AQVIQELRPVHEVAYILKFGEAPPFR 146


>ref|XP_002527496.1| histone deacetylase hda2, putative [Ricinus communis]
           gi|223533136|gb|EEF34894.1| histone deacetylase hda2,
           putative [Ricinus communis]
          Length = 159

 Score =  232 bits (592), Expect = 4e-59
 Identities = 103/147 (70%), Positives = 120/147 (81%)
 Frame = +1

Query: 169 TSKAAPSSSAAFEGVEEEEFMYGAGSGWVEARTSCDHLNTLSSDLSHIPTPDTPCTRCQH 348
           +  ++PS     E  +E   +YG+ SGWVEA+TSCDHL +LSSDLSHI TPDTPC RCQH
Sbjct: 8   SGSSSPSPHLGLEEDDELMTVYGSESGWVEAKTSCDHLGSLSSDLSHISTPDTPCHRCQH 67

Query: 349 PAENWLCLCCKDVFCSRFVNKHMLQHYQESKHCLALSYSDLSVWCFSCDAYLDVQAILQL 528
           P+ENWLCL CKDV CSRFVNKHMLQHY ++ HC+ALSYSDLSVWCF+CDAYLD Q I+QL
Sbjct: 68  PSENWLCLSCKDVLCSRFVNKHMLQHYHQTHHCVALSYSDLSVWCFACDAYLDAQVIMQL 127

Query: 529 RPVYEIAHLLKFGEAPPFRTIEFLQMT 609
           RPVYE A++LKFGEAPPFR +E  Q T
Sbjct: 128 RPVYETAYILKFGEAPPFRAVELTQDT 154


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