BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017178
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II su...    88   8e-16
ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...    88   8e-16
gb|AFW57310.1| RNA polymerase II large subunit family protein [Z...    88   8e-16
ref|XP_003573479.1| PREDICTED: DNA-directed RNA polymerase II su...    88   8e-16
dbj|BAK02300.1| predicted protein [Hordeum vulgare subsp. vulgare]     88   8e-16

>ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cucumis
            sativus]
          Length = 1853

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 43/50 (86%), Positives = 45/50 (90%)
 Frame = -2

Query: 372  RYSLLDKLCVVISFDGSYVNYRHLAILCDTMTY*GHLIAITLHDINRNDT 223
            R SLLD+L VVISFDGSYVNYRHLAILCDTMTY GHL+AIT H INRNDT
Sbjct: 1365 RRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 1414


>ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
            subunit RPB1-like [Cucumis sativus]
          Length = 1832

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 43/50 (86%), Positives = 45/50 (90%)
 Frame = -2

Query: 372  RYSLLDKLCVVISFDGSYVNYRHLAILCDTMTY*GHLIAITLHDINRNDT 223
            R SLLD+L VVISFDGSYVNYRHLAILCDTMTY GHL+AIT H INRNDT
Sbjct: 1365 RRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 1414


>gb|AFW57310.1| RNA polymerase II large subunit family protein [Zea mays]
          Length = 1850

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 43/50 (86%), Positives = 45/50 (90%)
 Frame = -2

Query: 372  RYSLLDKLCVVISFDGSYVNYRHLAILCDTMTY*GHLIAITLHDINRNDT 223
            R SLLD+L VVISFDGSYVNYRHLAILCDTMTY GHL+AIT H INRNDT
Sbjct: 1364 RRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 1413


>ref|XP_003573479.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like
            [Brachypodium distachyon]
          Length = 1862

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 43/50 (86%), Positives = 45/50 (90%)
 Frame = -2

Query: 372  RYSLLDKLCVVISFDGSYVNYRHLAILCDTMTY*GHLIAITLHDINRNDT 223
            R SLLD+L VVISFDGSYVNYRHLAILCDTMTY GHL+AIT H INRNDT
Sbjct: 1366 RRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 1415


>dbj|BAK02300.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1859

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 43/50 (86%), Positives = 45/50 (90%)
 Frame = -2

Query: 372  RYSLLDKLCVVISFDGSYVNYRHLAILCDTMTY*GHLIAITLHDINRNDT 223
            R SLLD+L VVISFDGSYVNYRHLAILCDTMTY GHL+AIT H INRNDT
Sbjct: 1365 RRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 1414