BLASTX nr result

ID: Cimicifuga21_contig00016407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016407
         (1724 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285328.1| PREDICTED: axial regulator YABBY 5 [Vitis vi...   268   3e-69
ref|XP_002527201.1| Axial regulator YABBY5, putative [Ricinus co...   259   2e-66
ref|XP_002313013.1| predicted protein [Populus trichocarpa] gi|2...   258   3e-66
gb|ADL36869.1| YABBY domain class transcription factor [Malus x ...   256   1e-65
ref|XP_002308074.1| predicted protein [Populus trichocarpa] gi|2...   256   1e-65

>ref|XP_002285328.1| PREDICTED: axial regulator YABBY 5 [Vitis vinifera]
           gi|297738980|emb|CBI28225.3| unnamed protein product
           [Vitis vinifera]
          Length = 185

 Score =  268 bits (685), Expect = 3e-69
 Identities = 135/184 (73%), Positives = 150/184 (81%), Gaps = 12/184 (6%)
 Frame = -2

Query: 643 MSSCTDVPSEQVCYIPCNFCNIILAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLS 464
           MSSC DV SEQ+CYIPCNFCNI+LAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAA QSLS
Sbjct: 1   MSSCIDVASEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLS 60

Query: 463 WQDLQTHSFPSLEH---FGSSSKIS-----MLPSPTNNGEMITHRAPEKKQRVPSAYNQF 308
           WQD+Q  ++ S ++    GSSSK +       P+   + E I +R PEK+QRVPSAYNQF
Sbjct: 61  WQDVQAPNYTSPDYRIDLGSSSKCNTKMAMRAPASNISEERIVNRPPEKRQRVPSAYNQF 120

Query: 307 IKQEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLM----NQAKMDEGPEKHLMTTA 140
           IK+EIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLM    NQ K+DEG EKHLM+ A
Sbjct: 121 IKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLETNNQPKLDEGSEKHLMSKA 180

Query: 139 ALFN 128
           AL N
Sbjct: 181 ALRN 184


>ref|XP_002527201.1| Axial regulator YABBY5, putative [Ricinus communis]
           gi|223533466|gb|EEF35214.1| Axial regulator YABBY5,
           putative [Ricinus communis]
          Length = 185

 Score =  259 bits (661), Expect = 2e-66
 Identities = 133/184 (72%), Positives = 149/184 (80%), Gaps = 12/184 (6%)
 Frame = -2

Query: 643 MSSCTDVPSEQVCYIPCNFCNIILAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLS 464
           MSSC DV  EQ+CYIPCNFCNI+LAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAA QSLS
Sbjct: 1   MSSCVDVVPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLS 60

Query: 463 WQDLQTHSFPSLEH---FGSSSK----ISM-LPSPTNNG-EMITHRAPEKKQRVPSAYNQ 311
           WQD Q  S  S ++    GSSSK    ISM  P+P N   E + +R PEK+QRVPSAYNQ
Sbjct: 61  WQDFQAPSHNSPDYRIELGSSSKCNNRISMRAPAPHNIAEERVVNRPPEKRQRVPSAYNQ 120

Query: 310 FIKQEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLM---NQAKMDEGPEKHLMTTA 140
           FIK+EIQRIKANNP+ISHREAFSTAAKNWAH+PHIHFGL    +Q K+D+  EKHLM+ A
Sbjct: 121 FIKEEIQRIKANNPEISHREAFSTAAKNWAHYPHIHFGLTLNNHQTKLDDASEKHLMSRA 180

Query: 139 ALFN 128
           AL+N
Sbjct: 181 ALYN 184


>ref|XP_002313013.1| predicted protein [Populus trichocarpa] gi|222849421|gb|EEE86968.1|
            predicted protein [Populus trichocarpa]
          Length = 231

 Score =  258 bits (660), Expect = 3e-66
 Identities = 147/253 (58%), Positives = 179/253 (70%), Gaps = 3/253 (1%)
 Frame = +2

Query: 758  ASCKRAVQIGKSSASASIHRRFNNVSSPHLYSS---FRHMTQLSTNLNGKRAVIVDSLAL 928
            A C R V+ G +SA      R  N SS   + +   +RH++QL    N KRA +VD+LAL
Sbjct: 2    ALCSRVVRSGVNSAIFFAKSRAINPSSSSSFGNRFDYRHISQLVRPNNNKRAFLVDTLAL 61

Query: 929  VRGLEAQGIPSKQADAIATAIAVVSKDNLETASQSFVSKLEIQKFEMNQESNLSQHKSEM 1108
            VRGLE+QG+PSKQA+AI  AI  V  D+LE  + SFVSK E+QK EM Q+SNLS+     
Sbjct: 62   VRGLESQGVPSKQAEAITAAITEVLNDSLENVAYSFVSKAEMQKSEMIQDSNLSK----- 116

Query: 1109 KSSLSQFKSEMESSQEHHLSSLQRETEKLRNDMEKINSELRYEIDKVTAGYRLDMNLERG 1288
                  FKSE++SSQEHH S LQRETEKLR D++K+ SELRYEIDKVTAG RLD+NLERG
Sbjct: 117  ------FKSEVQSSQEHHFSLLQRETEKLRGDIDKMRSELRYEIDKVTAGQRLDLNLERG 170

Query: 1289 RTRDELANQNAEITNLSNKFDREITNLNNKIDRETHAYRAQLEASKYEVIKYCIGTFVSI 1468
            R RDELANQNAE TNL+NK DREI           HA RA LEA+KY+VIKYCIGT VSI
Sbjct: 171  RIRDELANQNAETTNLTNKLDREI-----------HALRAHLEAAKYDVIKYCIGTLVSI 219

Query: 1469 SAIGLATMIRVMM 1507
             A+G+AT +R+++
Sbjct: 220  CAVGIAT-VRILL 231


>gb|ADL36869.1| YABBY domain class transcription factor [Malus x domestica]
          Length = 188

 Score =  256 bits (654), Expect = 1e-65
 Identities = 131/188 (69%), Positives = 147/188 (78%), Gaps = 15/188 (7%)
 Frame = -2

Query: 643 MSSCTDVPSEQVCYIPCNFCNIILAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLS 464
           M+SC DV +EQ+CYIPCNFC+I+LAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAA QS S
Sbjct: 1   MTSCVDVATEQLCYIPCNFCSIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSPS 60

Query: 463 WQDLQTHSFPSLEH-----FGSSSKI---SMLPSPTNN---GEMITHRAPEKKQRVPSAY 317
           WQD+Q  ++           GSSSK    +    PT++    E   +R PEK+QRVPSAY
Sbjct: 61  WQDVQAQNYNYNSQNYRIDLGSSSKCNKKNATRDPTSDHVTEERGVNRPPEKRQRVPSAY 120

Query: 316 NQFIKQEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLM----NQAKMDEGPEKHLM 149
           NQFIK+EIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLM    NQAK+D  PEKHLM
Sbjct: 121 NQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLEANNQAKLDNDPEKHLM 180

Query: 148 TTAALFNN 125
           + AAL NN
Sbjct: 181 SRAALLNN 188


>ref|XP_002308074.1| predicted protein [Populus trichocarpa] gi|222854050|gb|EEE91597.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score =  256 bits (654), Expect = 1e-65
 Identities = 134/188 (71%), Positives = 151/188 (80%), Gaps = 15/188 (7%)
 Frame = -2

Query: 643 MSSCTD-VPSEQVCYIPCNFCNIILAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSL 467
           MSSC D VP+EQ+CYIPCNFCNI+LAVSVPCSSLFDIVTVRCGHCTN+WSVNMAAA QSL
Sbjct: 1   MSSCIDAVPNEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNIWSVNMAAAFQSL 60

Query: 466 SWQD-LQTHSFPSLEH---FGSSS----KISMLPSPTN--NGEMITHRAPEKKQRVPSAY 317
           SWQD +Q  ++ S ++    GSSS    KISM     N    E + +R PEK+QRVPSAY
Sbjct: 61  SWQDQVQASNYNSHDYRIDLGSSSKCNNKISMRTPAANIVTQERVVNRPPEKRQRVPSAY 120

Query: 316 NQFIKQEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLM----NQAKMDEGPEKHLM 149
           NQFIK+EIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLM    NQ K+D+G EK LM
Sbjct: 121 NQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLETNNQTKVDDGSEKRLM 180

Query: 148 TTAALFNN 125
           + +AL NN
Sbjct: 181 SRSALQNN 188


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