BLASTX nr result

ID: Cimicifuga21_contig00016401 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016401
         (1171 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282252.1| PREDICTED: glutamate-rich WD repeat-containi...   511   e-142
ref|XP_004173317.1| PREDICTED: glutamate-rich WD repeat-containi...   499   e-139
ref|XP_004135709.1| PREDICTED: glutamate-rich WD repeat-containi...   499   e-139
ref|XP_003524897.1| PREDICTED: glutamate-rich WD repeat-containi...   498   e-139
ref|XP_003531198.1| PREDICTED: LOW QUALITY PROTEIN: glutamate-ri...   494   e-137

>ref|XP_002282252.1| PREDICTED: glutamate-rich WD repeat-containing protein 1 [Vitis
            vinifera] gi|297738673|emb|CBI27918.3| unnamed protein
            product [Vitis vinifera]
          Length = 474

 Score =  511 bits (1317), Expect = e-142
 Identities = 237/324 (73%), Positives = 273/324 (84%), Gaps = 1/324 (0%)
 Frame = +2

Query: 2    SQPPVLQLRKVAHDGGVNRIRAMPQSPHICASWSDTGHVEVWDFTSHLNALAETEAEVST 181
            S  P+LQ+RKVAH+G VNRIRAM Q+PHICASW+DTGHV+VWDF+SHLNALAE+E + + 
Sbjct: 151  SGTPILQMRKVAHEGCVNRIRAMTQNPHICASWADTGHVQVWDFSSHLNALAESETDANQ 210

Query: 182  GASSSFSMAPIIKFGGHKDEGFAIDWSPLVPGRLLSGDCNKCIHLWEPLSSGTWKVDDTP 361
            G++ + + AP++KFGGHKDEG+AIDWSP+VPG+L++GDC  CI+LWEP S  TWKVD  P
Sbjct: 211  GSTPAINQAPLVKFGGHKDEGYAIDWSPVVPGKLVTGDCKNCIYLWEPTSDATWKVDTNP 270

Query: 362  FVGHKASVEDLQWSPTEADVFASCSADGHFAIWDIRVGKKPAAYIEAHKADVNVISWNRL 541
            F+GH ASVEDLQWSPTE  VFASCS DG+ AIWD R+G+ PAA  +AH ADVNV+SWNRL
Sbjct: 271  FIGHTASVEDLQWSPTEVHVFASCSVDGNIAIWDTRLGRSPAASFKAHNADVNVLSWNRL 330

Query: 542  ASCMLATGSDDGTFSIHDLRLLKE-DSRVAHFEYHKQPITSIEWSPHETSTLAVTSADNQ 718
            ASCMLA+GSDDGTFSI DLRLLK+ DS VAHFEYHK PITSIEWSPHE STLAV+S+DNQ
Sbjct: 331  ASCMLASGSDDGTFSIRDLRLLKDGDSVVAHFEYHKHPITSIEWSPHEASTLAVSSSDNQ 390

Query: 719  LTIWDLSLXXXXXXXXXXXXQIKRQANAPEDLPPQLLFVHQGQKDLKELHWHPQIPGMLL 898
            LTIWDLSL            Q K Q NAPEDLPPQLLFVHQGQKDLKELHWH QIPGM++
Sbjct: 391  LTIWDLSLEKDEEEEAEFRAQTKEQVNAPEDLPPQLLFVHQGQKDLKELHWHSQIPGMII 450

Query: 899  STASDGFNVLMPSNIENTLPSDAA 970
            STA+DGFNVLMPSNI+N LPS  A
Sbjct: 451  STAADGFNVLMPSNIQNVLPSGNA 474


>ref|XP_004173317.1| PREDICTED: glutamate-rich WD repeat-containing protein 1-like,
            partial [Cucumis sativus]
          Length = 465

 Score =  499 bits (1285), Expect = e-139
 Identities = 241/321 (75%), Positives = 267/321 (83%), Gaps = 1/321 (0%)
 Frame = +2

Query: 11   PVLQLRKVAHDGGVNRIRAMPQSPHICASWSDTGHVEVWDFTSHLNALAETEAEVSTGAS 190
            PV QLRKVAH+G VNRIRAM Q+PHICASW+D GHV++WDF+SHLN LA +E  VS G S
Sbjct: 145  PVWQLRKVAHEGCVNRIRAMQQNPHICASWADGGHVQIWDFSSHLNTLAGSEPTVSPGDS 204

Query: 191  SSFSMAPIIKFGGHKDEGFAIDWSPLVPGRLLSGDCNKCIHLWEPLSSGTWKVDDTPFVG 370
            S F+ AP+  F  HKDEG+A+DWSPLVPGRLLSGDC   IHLWEP S+ +W VD  PFVG
Sbjct: 205  SVFNQAPLTLFK-HKDEGYALDWSPLVPGRLLSGDCKSFIHLWEPSSATSWNVDTAPFVG 263

Query: 371  HKASVEDLQWSPTEADVFASCSADGHFAIWDIRVGKKPAAYIEAHKADVNVISWNRLASC 550
            H ASVEDLQWSPTE  VF+SCSADG+ AIWD+R GK PAA  +AH ADVNVISWNRLASC
Sbjct: 264  HSASVEDLQWSPTEPHVFSSCSADGNVAIWDVRSGKSPAASFKAHNADVNVISWNRLASC 323

Query: 551  MLATGSDDGTFSIHDLRLLKE-DSRVAHFEYHKQPITSIEWSPHETSTLAVTSADNQLTI 727
            MLA+GSDDGTFSIHDLRLLKE DS VAHFEYHKQPITSIEWSPHE STLAV+SADNQLTI
Sbjct: 324  MLASGSDDGTFSIHDLRLLKEGDSVVAHFEYHKQPITSIEWSPHEASTLAVSSADNQLTI 383

Query: 728  WDLSLXXXXXXXXXXXXQIKRQANAPEDLPPQLLFVHQGQKDLKELHWHPQIPGMLLSTA 907
            WDLSL            + + Q NAPEDLPPQLLFVHQGQ DLKELHWH QIPGM++STA
Sbjct: 384  WDLSLEKDEEEEAEFKAKTQEQVNAPEDLPPQLLFVHQGQNDLKELHWHAQIPGMIVSTA 443

Query: 908  SDGFNVLMPSNIENTLPSDAA 970
            +DGFN+LMPSNI+ TLPSDAA
Sbjct: 444  ADGFNILMPSNIQTTLPSDAA 464


>ref|XP_004135709.1| PREDICTED: glutamate-rich WD repeat-containing protein 1-like
            [Cucumis sativus]
          Length = 475

 Score =  499 bits (1285), Expect = e-139
 Identities = 241/321 (75%), Positives = 267/321 (83%), Gaps = 1/321 (0%)
 Frame = +2

Query: 11   PVLQLRKVAHDGGVNRIRAMPQSPHICASWSDTGHVEVWDFTSHLNALAETEAEVSTGAS 190
            PV QLRKVAH+G VNRIRAM Q+PHICASW+D GHV++WDF+SHLN LA +E  VS G S
Sbjct: 155  PVWQLRKVAHEGCVNRIRAMQQNPHICASWADGGHVQIWDFSSHLNTLAGSEPTVSPGDS 214

Query: 191  SSFSMAPIIKFGGHKDEGFAIDWSPLVPGRLLSGDCNKCIHLWEPLSSGTWKVDDTPFVG 370
            S F+ AP+  F  HKDEG+A+DWSPLVPGRLLSGDC   IHLWEP S+ +W VD  PFVG
Sbjct: 215  SVFNQAPLTLFK-HKDEGYALDWSPLVPGRLLSGDCKSFIHLWEPSSATSWNVDTAPFVG 273

Query: 371  HKASVEDLQWSPTEADVFASCSADGHFAIWDIRVGKKPAAYIEAHKADVNVISWNRLASC 550
            H ASVEDLQWSPTE  VF+SCSADG+ AIWD+R GK PAA  +AH ADVNVISWNRLASC
Sbjct: 274  HSASVEDLQWSPTEPHVFSSCSADGNVAIWDVRSGKSPAASFKAHNADVNVISWNRLASC 333

Query: 551  MLATGSDDGTFSIHDLRLLKE-DSRVAHFEYHKQPITSIEWSPHETSTLAVTSADNQLTI 727
            MLA+GSDDGTFSIHDLRLLKE DS VAHFEYHKQPITSIEWSPHE STLAV+SADNQLTI
Sbjct: 334  MLASGSDDGTFSIHDLRLLKEGDSVVAHFEYHKQPITSIEWSPHEASTLAVSSADNQLTI 393

Query: 728  WDLSLXXXXXXXXXXXXQIKRQANAPEDLPPQLLFVHQGQKDLKELHWHPQIPGMLLSTA 907
            WDLSL            + + Q NAPEDLPPQLLFVHQGQ DLKELHWH QIPGM++STA
Sbjct: 394  WDLSLEKDEEEEAEFKAKTQEQVNAPEDLPPQLLFVHQGQNDLKELHWHAQIPGMIVSTA 453

Query: 908  SDGFNVLMPSNIENTLPSDAA 970
            +DGFN+LMPSNI+ TLPSDAA
Sbjct: 454  ADGFNILMPSNIQTTLPSDAA 474


>ref|XP_003524897.1| PREDICTED: glutamate-rich WD repeat-containing protein 1-like
            [Glycine max]
          Length = 475

 Score =  498 bits (1283), Expect = e-139
 Identities = 237/326 (72%), Positives = 268/326 (82%), Gaps = 3/326 (0%)
 Frame = +2

Query: 2    SQPPVLQLRKVAHDGGVNRIRAMPQSPHICASWSDTGHVEVWDFTSHLNALAETEAEVST 181
            +Q P LQLRKVAH G VNRIR+MPQ+PHICA+W+DTGHV+VWD  SHLNALAE+E E   
Sbjct: 150  AQGPSLQLRKVAHQGCVNRIRSMPQNPHICAAWADTGHVQVWDLNSHLNALAESETEGVQ 209

Query: 182  GASSSFSMAPIIKFGGHKDEGFAIDWSPLVPGRLLSGDCNKCIHLWEPLSSGTWKVDDTP 361
            G ++ F+  P+ KF  HKDEG+AIDWSPLVPGRL SGDCN CI+LWEP S+GTW VD+ P
Sbjct: 210  GVAAVFNQDPLYKFK-HKDEGYAIDWSPLVPGRLASGDCNNCIYLWEPTSAGTWNVDNAP 268

Query: 362  FVGHKASVEDLQWSPTEADVFASCSADGHFAIWDIRVGKKPAAYIEAHKADVNVISWNRL 541
            F GH ASVEDLQWSPTE DVFASCS DG+ AIWD R+GK PAA  +AH ADVNV+SWNRL
Sbjct: 269  FTGHTASVEDLQWSPTEPDVFASCSVDGNIAIWDTRLGKSPAASFKAHNADVNVMSWNRL 328

Query: 542  ASCMLATGSDDGTFSIHDLRLLK---EDSRVAHFEYHKQPITSIEWSPHETSTLAVTSAD 712
            ASCMLA+GSDDGT SI DLRLLK    DS VAHFEYHK PITSIEWSPHE S+LAV+S+D
Sbjct: 329  ASCMLASGSDDGTISIRDLRLLKVQEGDSVVAHFEYHKHPITSIEWSPHEASSLAVSSSD 388

Query: 713  NQLTIWDLSLXXXXXXXXXXXXQIKRQANAPEDLPPQLLFVHQGQKDLKELHWHPQIPGM 892
            NQLTIWDLSL            + K Q NAPEDLPPQLLF+HQGQKDLKELHWH QIPGM
Sbjct: 389  NQLTIWDLSLEKDEEEEAEFKAKTKEQVNAPEDLPPQLLFIHQGQKDLKELHWHAQIPGM 448

Query: 893  LLSTASDGFNVLMPSNIENTLPSDAA 970
            ++STA+DGFN+LMPSNI++TLPSD A
Sbjct: 449  IVSTAADGFNILMPSNIQSTLPSDGA 474


>ref|XP_003531198.1| PREDICTED: LOW QUALITY PROTEIN: glutamate-rich WD repeat-containing
            protein 1-like [Glycine max]
          Length = 472

 Score =  494 bits (1273), Expect = e-137
 Identities = 234/319 (73%), Positives = 265/319 (83%), Gaps = 1/319 (0%)
 Frame = +2

Query: 17   LQLRKVAHDGGVNRIRAMPQSPHICASWSDTGHVEVWDFTSHLNALAETEAEVSTGASSS 196
            LQLRKVAH G VNRIR+MPQ+PHICA+W+DTGHV+VWD  SHLN LAETE E   G ++ 
Sbjct: 154  LQLRKVAHQGCVNRIRSMPQNPHICAAWADTGHVQVWDLNSHLNVLAETETEGVQGVAAV 213

Query: 197  FSMAPIIKFGGHKDEGFAIDWSPLVPGRLLSGDCNKCIHLWEPLSSGTWKVDDTPFVGHK 376
            F+  P+ KF  HKDEG+AIDWSPLVPG+L SGDCN CI+LWEP S+GTW VD+ PF+GH 
Sbjct: 214  FNQDPLYKFK-HKDEGYAIDWSPLVPGKLASGDCNNCIYLWEPTSAGTWNVDNAPFIGHT 272

Query: 377  ASVEDLQWSPTEADVFASCSADGHFAIWDIRVGKKPAAYIEAHKADVNVISWNRLASCML 556
            ASVEDLQWSPTE+ VFASCS DG+ AIWD R+GK PAA  +AH ADVNV+SWNRLASCML
Sbjct: 273  ASVEDLQWSPTESHVFASCSVDGNIAIWDTRLGKSPAASFKAHNADVNVMSWNRLASCML 332

Query: 557  ATGSDDGTFSIHDLRLLKE-DSRVAHFEYHKQPITSIEWSPHETSTLAVTSADNQLTIWD 733
            A+GSDDGT SI DLRLLKE DS VAHFEYHK PITSIEWSPHE S+LAV+S+DNQLTIWD
Sbjct: 333  ASGSDDGTISIRDLRLLKEGDSVVAHFEYHKHPITSIEWSPHEASSLAVSSSDNQLTIWD 392

Query: 734  LSLXXXXXXXXXXXXQIKRQANAPEDLPPQLLFVHQGQKDLKELHWHPQIPGMLLSTASD 913
            LSL            + K Q NAPEDLPPQLLF+HQGQKDLKELHWH QIPGM++STA D
Sbjct: 393  LSLEKDEEEEAEFKAKTKEQVNAPEDLPPQLLFIHQGQKDLKELHWHTQIPGMIVSTAED 452

Query: 914  GFNVLMPSNIENTLPSDAA 970
            GFNVLMPSNI++TLPS+ A
Sbjct: 453  GFNVLMPSNIQSTLPSNGA 471


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