BLASTX nr result

ID: Cimicifuga21_contig00016398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016398
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304198.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_002516038.1| conserved hypothetical protein [Ricinus comm...    73   2e-11
ref|XP_003531676.1| PREDICTED: uncharacterized protein LOC100812...    73   3e-11
ref|NP_563967.1| uncharacterized protein [Arabidopsis thaliana] ...    70   1e-10
ref|XP_002892855.1| hypothetical protein ARALYDRAFT_888914 [Arab...    69   4e-10

>ref|XP_002304198.1| predicted protein [Populus trichocarpa] gi|222841630|gb|EEE79177.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 44/85 (51%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
 Frame = +2

Query: 119 MEAAKEESGILGTIRAPRLEEAGLEDCALSPNSIKEAFFKAANSIRSLLTDEEEHQTDSK 298
           MEA KE +G+L  I  PRLE+AGLEDCAL P+ IKEAF KAA++++S  T     + +S 
Sbjct: 1   MEATKEGTGLLDKIVPPRLEDAGLEDCALPPDLIKEAFLKAASAVKSRATSIFSDEDESA 60

Query: 299 GCVQDPGPTNSK-SGDSLIGIAPTP 370
            CVQDP P  +K + D L+G+ P P
Sbjct: 61  ECVQDPWPEGAKFASDKLVGVPPVP 85


>ref|XP_002516038.1| conserved hypothetical protein [Ricinus communis]
           gi|223544943|gb|EEF46458.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 153

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 43/85 (50%), Positives = 57/85 (67%), Gaps = 5/85 (5%)
 Frame = +2

Query: 134 EESGILGTIRAPRLEEAGLEDCALSPNSIKEAFFKAANSIRS-----LLTDEEEHQTDSK 298
           EES  +  I  PRLE+AGLEDCAL P+SIKEAFFKAA++++S     L +D+E+ +TD  
Sbjct: 2   EES--INEILPPRLEDAGLEDCALPPDSIKEAFFKAASAVKSRVTSILTSDDEDEETD-- 57

Query: 299 GCVQDPGPTNSKSGDSLIGIAPTPD 373
            CVQDP P  +K     +  AP P+
Sbjct: 58  -CVQDPWPDEAK---EFVDGAPWPE 78


>ref|XP_003531676.1| PREDICTED: uncharacterized protein LOC100812629 [Glycine max]
          Length = 167

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 39/82 (47%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
 Frame = +2

Query: 119 MEAAKEESGILGTIRAPRLEEAGLEDCALSPNSIKEAFFKAANSIRSLLTDEEEHQTDSK 298
           ME+ KE+SG+L  I  PRLE+AGLED AL P+SI EAF KAA +++S          D  
Sbjct: 1   MESTKEQSGMLHKILPPRLEDAGLEDPALPPDSIHEAFLKAAAAVKSRAASIFSSTDDDN 60

Query: 299 --GCVQDPGPTNSKSGDSLIGI 358
             GCV DP P+   + D++IG+
Sbjct: 61  DGGCVSDPWPSAKDASDAVIGV 82


>ref|NP_563967.1| uncharacterized protein [Arabidopsis thaliana]
           gi|5103822|gb|AAD39652.1|AC007591_17 ESTs gb|R30529,
           gb|Z48463, gb|Z48467, gb|AA597369 and gb|AA394772 come
           from this gene [Arabidopsis thaliana]
           gi|12484213|gb|AAG54005.1|AF336924_1 unknown protein
           [Arabidopsis thaliana] gi|16209680|gb|AAL14398.1|
           At1g15230/F9L1_18 [Arabidopsis thaliana]
           gi|21360405|gb|AAM47318.1| At1g15230/F9L1_18
           [Arabidopsis thaliana] gi|332191170|gb|AEE29291.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 155

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 36/68 (52%), Positives = 46/68 (67%)
 Frame = +2

Query: 119 MEAAKEESGILGTIRAPRLEEAGLEDCALSPNSIKEAFFKAANSIRSLLTDEEEHQTDSK 298
           MEA KE  G+L TI  P L +AGLEDCAL P SI+EAF KAAN+++S      +H+ +  
Sbjct: 1   MEATKERVGLLDTILPPALADAGLEDCALPPESIQEAFRKAANAVKSRAASIFDHE-EED 59

Query: 299 GCVQDPGP 322
           GC+ DP P
Sbjct: 60  GCLADPIP 67


>ref|XP_002892855.1| hypothetical protein ARALYDRAFT_888914 [Arabidopsis lyrata subsp.
           lyrata] gi|297338697|gb|EFH69114.1| hypothetical protein
           ARALYDRAFT_888914 [Arabidopsis lyrata subsp. lyrata]
          Length = 155

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/71 (50%), Positives = 47/71 (66%)
 Frame = +2

Query: 119 MEAAKEESGILGTIRAPRLEEAGLEDCALSPNSIKEAFFKAANSIRSLLTDEEEHQTDSK 298
           MEA +E+ G+L  I  P L +AGLEDCAL P SI++AF KAAN+++S      EH+ +  
Sbjct: 1   MEATQEQVGLLDKILPPALADAGLEDCALPPESIQDAFRKAANAVKSRAVSIFEHEEEG- 59

Query: 299 GCVQDPGPTNS 331
           GCV DP P  S
Sbjct: 60  GCVADPIPEAS 70


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