BLASTX nr result

ID: Cimicifuga21_contig00016372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016372
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22284.3| unnamed protein product [Vitis vinifera]               65   7e-09
ref|XP_002284243.1| PREDICTED: chaperone protein ClpB3, chloropl...    65   7e-09
ref|XP_002305376.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
ref|XP_004148000.1| PREDICTED: chaperone protein ClpB3, chloropl...    56   3e-06
ref|XP_003552554.1| PREDICTED: chaperone protein ClpB3, chloropl...    55   4e-06

>emb|CBI22284.3| unnamed protein product [Vitis vinifera]
          Length = 875

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 40/68 (58%), Positives = 47/68 (69%)
 Frame = +3

Query: 282 LSLTVNPRTLKTLKTSRALKKNDVFFSTRGIDRFGKKSSSSFVVRCEAQSNGRITQQEFT 461
           L+L+   R+LK L + R LK+NDVF S R       K   SFVVRC+A S GRITQQ+FT
Sbjct: 32  LNLSARRRSLKALNSLR-LKQNDVFLSKRFAG--SGKCPRSFVVRCDA-SGGRITQQDFT 87

Query: 462 EMAWQAIV 485
           EMAWQAIV
Sbjct: 88  EMAWQAIV 95


>ref|XP_002284243.1| PREDICTED: chaperone protein ClpB3, chloroplastic-like [Vitis
           vinifera]
          Length = 976

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 40/68 (58%), Positives = 47/68 (69%)
 Frame = +3

Query: 282 LSLTVNPRTLKTLKTSRALKKNDVFFSTRGIDRFGKKSSSSFVVRCEAQSNGRITQQEFT 461
           L+L+   R+LK L + R LK+NDVF S R       K   SFVVRC+A S GRITQQ+FT
Sbjct: 32  LNLSARRRSLKALNSLR-LKQNDVFLSKRFAG--SGKCPRSFVVRCDA-SGGRITQQDFT 87

Query: 462 EMAWQAIV 485
           EMAWQAIV
Sbjct: 88  EMAWQAIV 95


>ref|XP_002305376.1| predicted protein [Populus trichocarpa] gi|222848340|gb|EEE85887.1|
           predicted protein [Populus trichocarpa]
          Length = 967

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 34/68 (50%), Positives = 42/68 (61%)
 Frame = +3

Query: 282 LSLTVNPRTLKTLKTSRALKKNDVFFSTRGIDRFGKKSSSSFVVRCEAQSNGRITQQEFT 461
           +S  V   ++K+L+    L K +  FSTR          SSFVVRC A SNGR+TQQEFT
Sbjct: 32  ISFPVKRNSVKSLE----LNKRNGAFSTRA-------KPSSFVVRCAASSNGRVTQQEFT 80

Query: 462 EMAWQAIV 485
           +MAWQ IV
Sbjct: 81  DMAWQGIV 88


>ref|XP_004148000.1| PREDICTED: chaperone protein ClpB3, chloroplastic-like [Cucumis
           sativus] gi|449501963|ref|XP_004161506.1| PREDICTED:
           chaperone protein ClpB3, chloroplastic-like [Cucumis
           sativus]
          Length = 973

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 37/73 (50%), Positives = 45/73 (61%)
 Frame = +3

Query: 267 QSQYPLSLTVNPRTLKTLKTSRALKKNDVFFSTRGIDRFGKKSSSSFVVRCEAQSNGRIT 446
           +S   L+LT  P      K+   LK+N       G  RFG+  +S  VVRC+A SNGRIT
Sbjct: 34  KSPLALALTAKP------KSPLLLKRNV------GCQRFGR--NSRLVVRCDA-SNGRIT 78

Query: 447 QQEFTEMAWQAIV 485
           QQEFTEMAWQA+V
Sbjct: 79  QQEFTEMAWQAVV 91


>ref|XP_003552554.1| PREDICTED: chaperone protein ClpB3, chloroplastic-like [Glycine
           max]
          Length = 974

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 32/57 (56%), Positives = 40/57 (70%)
 Frame = +3

Query: 315 TLKTSRALKKNDVFFSTRGIDRFGKKSSSSFVVRCEAQSNGRITQQEFTEMAWQAIV 485
           +LK  ++L  N       G  R  +++SS F+VRCEA S+GRITQQEFTEMAWQAIV
Sbjct: 39  SLKPLQSLPFNKRHPFANGFQRI-RRNSSPFIVRCEA-SSGRITQQEFTEMAWQAIV 93


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