BLASTX nr result

ID: Cimicifuga21_contig00016363 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016363
         (1919 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40178.3| unnamed protein product [Vitis vinifera]              329   e-139
ref|XP_002270290.1| PREDICTED: probable ADP-ribosylation factor ...   327   e-138
ref|XP_002513070.1| DNA binding protein, putative [Ricinus commu...   274   e-125
ref|XP_004143816.1| PREDICTED: probable ADP-ribosylation factor ...   271   e-125
ref|XP_003539244.1| PREDICTED: probable ADP-ribosylation factor ...   269   e-125

>emb|CBI40178.3| unnamed protein product [Vitis vinifera]
          Length = 414

 Score =  329 bits (844), Expect(2) = e-139
 Identities = 172/283 (60%), Positives = 200/283 (70%)
 Frame = +2

Query: 401  GL*MTTRQENTDRNNGTGPGSCLLDLLCSERPTSWCCQKEEQISPTTSPLGRLEDLLDQP 580
            GL M TRQ+NTD NNG+G GS LLDLL S+    W C+KE Q S  + P GRLE+LL Q 
Sbjct: 36   GLKMPTRQDNTDSNNGSGTGSSLLDLLRSD--IYWNCRKEGQTS--SGPRGRLENLLCQS 91

Query: 581  GNRFCADCDSPDPKWVSVSHGVFICIKCSGVHRSLGVHISKVLSVKLDEWTNEQVDCLVD 760
            GN  CADC SPDPKWVSVS GVFICIKCSGVHRSLG H+SKVLS+KLDEWT+EQVD L  
Sbjct: 92   GNNICADCGSPDPKWVSVSLGVFICIKCSGVHRSLGAHVSKVLSIKLDEWTDEQVDTLTG 151

Query: 761  MGGNAAVNMRYEAHLSDNFRKPRPESSIEERSDFIKRKYELQQFLNSNIQRDCXXXXXXX 940
            MGGN+  NM+YEA + D  RKPRP+SS EERSDFI+RKYE+QQF NS+ Q  C       
Sbjct: 152  MGGNSEANMKYEASIPDYIRKPRPDSSTEERSDFIRRKYEMQQFFNSDEQMFCPFP---- 207

Query: 941  XXXXXXHCTSGNTNLDLPFDKKHYEKQHTSKGIHGLGHAFRNSWRRKESDYXXXXXXXXX 1120
                             P +KKHYEKQ T+  +HGLG AFRNSWRRKE ++         
Sbjct: 208  -----------------PQEKKHYEKQTTTHRLHGLGLAFRNSWRRKEPEH----KPVKK 246

Query: 1121 XXXAPGMVEFIGLIKINVVRGTNLAIRDVMTSDPYVILTLGSQ 1249
               + GM+EF+GLIK+NVV+GTNLA+RDVMTSDPYV+L LG Q
Sbjct: 247  SSSSAGMIEFVGLIKVNVVKGTNLAVRDVMTSDPYVLLALGQQ 289



 Score =  194 bits (494), Expect(2) = e-139
 Identities = 95/125 (76%), Positives = 114/125 (91%)
 Frame = +1

Query: 1324 TVKTRVIKSSLNPVWNESLMLSIPEPIPPLKLQVYDKDTFTTDDFMGDAEIDIQPLLSAA 1503
            +VKTRVIK++LNPVWNE LMLSIPE IPPL++ VYDKDTF+TDDFMG+AEIDIQPL+SAA
Sbjct: 290  SVKTRVIKNNLNPVWNERLMLSIPEQIPPLRVFVYDKDTFSTDDFMGEAEIDIQPLVSAA 349

Query: 1504 KAYENSTINESMQLGKWLATKDNTLVNDSVISLADGKVKQEIALQLQNVERGILLIELEC 1683
             A+ENST+NE M+ GK +A+K+NTLV DSVISL DGKV Q+++L+LQNVERG+L IELEC
Sbjct: 350  IAHENSTLNEPMEFGKLVASKENTLVKDSVISLTDGKVMQDVSLKLQNVERGVLEIELEC 409

Query: 1684 VPLSQ 1698
            VPLSQ
Sbjct: 410  VPLSQ 414


>ref|XP_002270290.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating protein
            AGD11-like [Vitis vinifera]
          Length = 376

 Score =  327 bits (838), Expect(2) = e-138
 Identities = 170/280 (60%), Positives = 198/280 (70%)
 Frame = +2

Query: 410  MTTRQENTDRNNGTGPGSCLLDLLCSERPTSWCCQKEEQISPTTSPLGRLEDLLDQPGNR 589
            M TRQ+NTD NNG+G GS LLDLL S+    W C+KE Q S  + P GRLE+LL Q GN 
Sbjct: 1    MPTRQDNTDSNNGSGTGSSLLDLLRSD--IYWNCRKEGQTS--SGPRGRLENLLCQSGNN 56

Query: 590  FCADCDSPDPKWVSVSHGVFICIKCSGVHRSLGVHISKVLSVKLDEWTNEQVDCLVDMGG 769
             CADC SPDPKWVSVS GVFICIKCSGVHRSLG H+SKVLS+KLDEWT+EQVD L  MGG
Sbjct: 57   ICADCGSPDPKWVSVSLGVFICIKCSGVHRSLGAHVSKVLSIKLDEWTDEQVDTLTGMGG 116

Query: 770  NAAVNMRYEAHLSDNFRKPRPESSIEERSDFIKRKYELQQFLNSNIQRDCXXXXXXXXXX 949
            N+  NM+YEA + D  RKPRP+SS EERSDFI+RKYE+QQF NS+ Q  C          
Sbjct: 117  NSEANMKYEASIPDYIRKPRPDSSTEERSDFIRRKYEMQQFFNSDEQMFCPFP------- 169

Query: 950  XXXHCTSGNTNLDLPFDKKHYEKQHTSKGIHGLGHAFRNSWRRKESDYXXXXXXXXXXXX 1129
                          P +KKHYEKQ T+  +HGLG AFRNSWRRKE ++            
Sbjct: 170  --------------PQEKKHYEKQTTTHRLHGLGLAFRNSWRRKEPEH----KPVKKSSS 211

Query: 1130 APGMVEFIGLIKINVVRGTNLAIRDVMTSDPYVILTLGSQ 1249
            + GM+EF+GLIK+NVV+GTNLA+RDVMTSDPYV+L LG Q
Sbjct: 212  SAGMIEFVGLIKVNVVKGTNLAVRDVMTSDPYVLLALGQQ 251



 Score =  194 bits (494), Expect(2) = e-138
 Identities = 95/125 (76%), Positives = 114/125 (91%)
 Frame = +1

Query: 1324 TVKTRVIKSSLNPVWNESLMLSIPEPIPPLKLQVYDKDTFTTDDFMGDAEIDIQPLLSAA 1503
            +VKTRVIK++LNPVWNE LMLSIPE IPPL++ VYDKDTF+TDDFMG+AEIDIQPL+SAA
Sbjct: 252  SVKTRVIKNNLNPVWNERLMLSIPEQIPPLRVFVYDKDTFSTDDFMGEAEIDIQPLVSAA 311

Query: 1504 KAYENSTINESMQLGKWLATKDNTLVNDSVISLADGKVKQEIALQLQNVERGILLIELEC 1683
             A+ENST+NE M+ GK +A+K+NTLV DSVISL DGKV Q+++L+LQNVERG+L IELEC
Sbjct: 312  IAHENSTLNEPMEFGKLVASKENTLVKDSVISLTDGKVMQDVSLKLQNVERGVLEIELEC 371

Query: 1684 VPLSQ 1698
            VPLSQ
Sbjct: 372  VPLSQ 376


>ref|XP_002513070.1| DNA binding protein, putative [Ricinus communis]
            gi|223548081|gb|EEF49573.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 382

 Score =  274 bits (700), Expect(2) = e-125
 Identities = 146/280 (52%), Positives = 186/280 (66%)
 Frame = +2

Query: 410  MTTRQENTDRNNGTGPGSCLLDLLCSERPTSWCCQKEEQISPTTSPLGRLEDLLDQPGNR 589
            M+  QEN+D      P + L D    +    W  ++  + S    PL +LE LL Q  N+
Sbjct: 1    MSMSQENSD-----APTTLLQDFFLPDNKHCWSRKERHKFS---GPLKKLEKLLSQSSNK 52

Query: 590  FCADCDSPDPKWVSVSHGVFICIKCSGVHRSLGVHISKVLSVKLDEWTNEQVDCLVDMGG 769
             CADC SPDPKWVS+SHGVFICIKCSGVHRSLGVHISKVLS+KLD+WT+EQV+  +D+GG
Sbjct: 53   TCADCGSPDPKWVSLSHGVFICIKCSGVHRSLGVHISKVLSIKLDDWTDEQVNNFIDLGG 112

Query: 770  NAAVNMRYEAHLSDNFRKPRPESSIEERSDFIKRKYELQQFLNSNIQRDCXXXXXXXXXX 949
            NAA N +YEA + ++F+KP+P+++IEERSDFI+RKYEL QFLN + Q  C          
Sbjct: 113  NAAANKKYEACIPNDFKKPKPDATIEERSDFIRRKYELLQFLNYSDQMICPYKPQRSSSA 172

Query: 950  XXXHCTSGNTNLDLPFDKKHYEKQHTSKGIHGLGHAFRNSWRRKESDYXXXXXXXXXXXX 1129
                 +S         +KK Y+KQ T    H +G+AFRNSW RK+S+             
Sbjct: 173  AQMSSSSQ--------EKKQYDKQATR---HRIGNAFRNSWGRKDSE----NKQSKKSNS 217

Query: 1130 APGMVEFIGLIKINVVRGTNLAIRDVMTSDPYVILTLGSQ 1249
              GMVEF+GLIK+NVV+GTNLA+RDV+TSDPYVIL+LG Q
Sbjct: 218  MAGMVEFVGLIKVNVVKGTNLAVRDVVTSDPYVILSLGHQ 257



 Score =  203 bits (517), Expect(2) = e-125
 Identities = 98/125 (78%), Positives = 116/125 (92%)
 Frame = +1

Query: 1324 TVKTRVIKSSLNPVWNESLMLSIPEPIPPLKLQVYDKDTFTTDDFMGDAEIDIQPLLSAA 1503
            +V+TRVIK++LNPVWNESLMLSIP+ IP LK+ VYDKDTFTTDDFMG+AEIDIQPL++AA
Sbjct: 258  SVRTRVIKNNLNPVWNESLMLSIPDHIPALKVLVYDKDTFTTDDFMGEAEIDIQPLVAAA 317

Query: 1504 KAYENSTINESMQLGKWLATKDNTLVNDSVISLADGKVKQEIALQLQNVERGILLIELEC 1683
            KAYE STINE MQLGKW+A+KDNTL+ D +I+L DGKVKQEI+L+LQNVERG+L IELEC
Sbjct: 318  KAYETSTINEPMQLGKWVASKDNTLLKDGIITLLDGKVKQEISLRLQNVERGVLEIELEC 377

Query: 1684 VPLSQ 1698
            VPL+Q
Sbjct: 378  VPLTQ 382


>ref|XP_004143816.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating protein
            AGD11-like [Cucumis sativus]
          Length = 416

 Score =  271 bits (693), Expect(2) = e-125
 Identities = 148/299 (49%), Positives = 194/299 (64%), Gaps = 19/299 (6%)
 Frame = +2

Query: 410  MTTRQENTDRNNGTGPGSCLLDLLC----------SERPTS-----WCCQKEEQISPTTS 544
            M+T+Q+N+D N  +G  +CL DLL           S  P+      W  +K++++S    
Sbjct: 1    MSTQQQNSDSNGVSG--ACLFDLLFPDSEMQGWDWSRMPSDSETQRWNWKKDQRLS---G 55

Query: 545  PLGRLEDLLDQPGNRFCADCDSPDPKWVSVSHGVFICIKCSGVHRSLGVHISKVLSVKLD 724
            P  RLEDLL Q GN FCADC SPDPKWVS++ GVFICIKCSGVHRSLGVH+SKV SVKLD
Sbjct: 56   PQKRLEDLLQQSGNMFCADCGSPDPKWVSLNLGVFICIKCSGVHRSLGVHVSKVFSVKLD 115

Query: 725  EWTNEQVDCLVDMGGNAAVNMRYEAHLSDNFRKPRPESSIEERSDFIKRKYELQQFLNSN 904
             WT+EQVD  + MGGN  +N ++EA + D  RKP+P+S IEER DFI+RKYEL QF N++
Sbjct: 116  NWTDEQVDTFMSMGGNTDINRKFEAGIIDLNRKPKPDSCIEERFDFIRRKYELLQFYNAS 175

Query: 905  IQRDCXXXXXXXXXXXXXHCTSGNTNLDLPFDKKHYEKQHTSKGIHGLGHAFRNSWRRKE 1084
              ++                +S +++ +   DK+HYEKQ T    H +GHAFRNS  R++
Sbjct: 176  SSQNSSDNNSLSKRSSSCSQSSNSSSKNGSHDKRHYEKQATR---HRVGHAFRNSRGRRD 232

Query: 1085 SDY----XXXXXXXXXXXXAPGMVEFIGLIKINVVRGTNLAIRDVMTSDPYVILTLGSQ 1249
             D+                + GMVEF+GL+K+NVV+G NLA+RDV+TSDPYVIL+LG Q
Sbjct: 233  GDHNHRNFERSSPPVSRQASAGMVEFVGLVKVNVVKGRNLAVRDVVTSDPYVILSLGHQ 291



 Score =  204 bits (519), Expect(2) = e-125
 Identities = 97/125 (77%), Positives = 116/125 (92%)
 Frame = +1

Query: 1324 TVKTRVIKSSLNPVWNESLMLSIPEPIPPLKLQVYDKDTFTTDDFMGDAEIDIQPLLSAA 1503
            +V+TRVIK++LNPVWNESLMLSIPE IPPLK+ VYDKDTFTTDDFMG+AEIDIQPL+SA 
Sbjct: 292  SVRTRVIKNNLNPVWNESLMLSIPEHIPPLKVLVYDKDTFTTDDFMGEAEIDIQPLVSAT 351

Query: 1504 KAYENSTINESMQLGKWLATKDNTLVNDSVISLADGKVKQEIALQLQNVERGILLIELEC 1683
            KAYE STI+ESMQLGKW+A+ DNTLV D +I+L DGKV+Q+I+L+LQNVERG+L IELEC
Sbjct: 352  KAYEKSTIDESMQLGKWVASNDNTLVKDGIINLVDGKVRQDISLRLQNVERGVLEIELEC 411

Query: 1684 VPLSQ 1698
            +PL+Q
Sbjct: 412  IPLTQ 416


>ref|XP_003539244.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating protein
            AGD11-like [Glycine max]
          Length = 359

 Score =  269 bits (688), Expect(2) = e-125
 Identities = 140/237 (59%), Positives = 168/237 (70%)
 Frame = +2

Query: 539  TSPLGRLEDLLDQPGNRFCADCDSPDPKWVSVSHGVFICIKCSGVHRSLGVHISKVLSVK 718
            + P  RL++L+ Q GN++CADC S DPKWVS ++GVFICIKCSGVHRSLGVHISKVLS+K
Sbjct: 14   SGPQKRLDNLMRQAGNKYCADCGSSDPKWVSSNNGVFICIKCSGVHRSLGVHISKVLSLK 73

Query: 719  LDEWTNEQVDCLVDMGGNAAVNMRYEAHLSDNFRKPRPESSIEERSDFIKRKYELQQFLN 898
            LDEWT+EQVD LV++GGN  +NM+YEA L  N +KP+P SSIEER DFI+RKYE  QFLN
Sbjct: 74   LDEWTDEQVDALVNLGGNTVINMKYEACLPSNIKKPKPNSSIEERYDFIRRKYEFLQFLN 133

Query: 899  SNIQRDCXXXXXXXXXXXXXHCTSGNTNLDLPFDKKHYEKQHTSKGIHGLGHAFRNSWRR 1078
                  C             H  S ++N   P DKKHY+KQ T   I   G AFRNSW R
Sbjct: 134  IEENLSC--------PFVPSHARSSSSN-KFPQDKKHYDKQATKSRI---GSAFRNSWGR 181

Query: 1079 KESDYXXXXXXXXXXXXAPGMVEFIGLIKINVVRGTNLAIRDVMTSDPYVILTLGSQ 1249
            K+S++              GMVEFIGLIK+NVV+GTNLAIRDVM+SDPYVI++LG Q
Sbjct: 182  KDSEH----KSSKKSNSLAGMVEFIGLIKVNVVKGTNLAIRDVMSSDPYVIISLGHQ 234



 Score =  206 bits (524), Expect(2) = e-125
 Identities = 100/125 (80%), Positives = 118/125 (94%)
 Frame = +1

Query: 1324 TVKTRVIKSSLNPVWNESLMLSIPEPIPPLKLQVYDKDTFTTDDFMGDAEIDIQPLLSAA 1503
            +VKTRVIKSSLNP+WNESLMLSIP+ IPPLK+ VYDKDTF+TDDFMG+AEIDIQPL+SAA
Sbjct: 235  SVKTRVIKSSLNPIWNESLMLSIPDHIPPLKVLVYDKDTFSTDDFMGEAEIDIQPLVSAA 294

Query: 1504 KAYENSTINESMQLGKWLATKDNTLVNDSVISLADGKVKQEIALQLQNVERGILLIELEC 1683
            KAYE S+INESMQLGKW+A+ DNTLV DS+ISL +GKVKQEI+++LQ+VERG+L IELEC
Sbjct: 295  KAYEKSSINESMQLGKWVASGDNTLVKDSIISLEEGKVKQEISVRLQHVERGVLEIELEC 354

Query: 1684 VPLSQ 1698
            VPL+Q
Sbjct: 355  VPLTQ 359


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