BLASTX nr result

ID: Cimicifuga21_contig00016350 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016350
         (831 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB93075.1| transmembrane protein 50a, putative [Jatropha cur...   265   7e-69
ref|XP_002285830.1| PREDICTED: transmembrane protein 50 homolog ...   262   8e-68
ref|XP_004140320.1| PREDICTED: transmembrane protein 50 homolog ...   261   1e-67
ref|XP_002302262.1| predicted protein [Populus trichocarpa] gi|2...   259   5e-67
ref|NP_564477.1| uncharacterized protein [Arabidopsis thaliana] ...   253   3e-65

>gb|ADB93075.1| transmembrane protein 50a, putative [Jatropha curcas]
          Length = 135

 Score =  265 bits (678), Expect = 7e-69
 Identities = 121/135 (89%), Positives = 131/135 (97%)
 Frame = +3

Query: 48  MDLGELWAIFGPGVSGAVFGAGWWFWVDAVVCSSVKVSFVHYLPGIFASVAALMFNCVRR 227
           MDL ELWAIFGPGV+GAVFG GWWFW+DAVVCSSVKVSFVHYLPGIFAS AALMFNCVR+
Sbjct: 1   MDLAELWAIFGPGVAGAVFGTGWWFWIDAVVCSSVKVSFVHYLPGIFASFAALMFNCVRK 60

Query: 228 EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLVQDALVQSGPSAWTGTAGVLQCV 407
           EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLL+QD++V++GPS WTGTAGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSIVKTGPSVWTGTAGVLQCV 120

Query: 408 FVLISGLMYWTSHTE 452
           FVLISGL+YWTSH+E
Sbjct: 121 FVLISGLIYWTSHSE 135


>ref|XP_002285830.1| PREDICTED: transmembrane protein 50 homolog [Vitis vinifera]
           gi|302141881|emb|CBI19084.3| unnamed protein product
           [Vitis vinifera]
          Length = 135

 Score =  262 bits (669), Expect = 8e-68
 Identities = 120/135 (88%), Positives = 131/135 (97%)
 Frame = +3

Query: 48  MDLGELWAIFGPGVSGAVFGAGWWFWVDAVVCSSVKVSFVHYLPGIFASVAALMFNCVRR 227
           MDL ELWAIFGPG++GA+FGAGWWFWVDAVVCSSVKVSFVHYLPGIFAS+AA+MFN VR+
Sbjct: 1   MDLAELWAIFGPGIAGAIFGAGWWFWVDAVVCSSVKVSFVHYLPGIFASLAAVMFNSVRK 60

Query: 228 EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLVQDALVQSGPSAWTGTAGVLQCV 407
           EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLL+QD+L +SGPS WTGTAGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSLEKSGPSVWTGTAGVLQCV 120

Query: 408 FVLISGLMYWTSHTE 452
           FVLISGL+YWTSH+E
Sbjct: 121 FVLISGLIYWTSHSE 135


>ref|XP_004140320.1| PREDICTED: transmembrane protein 50 homolog [Cucumis sativus]
           gi|449525329|ref|XP_004169670.1| PREDICTED:
           transmembrane protein 50 homolog [Cucumis sativus]
          Length = 135

 Score =  261 bits (667), Expect = 1e-67
 Identities = 119/135 (88%), Positives = 130/135 (96%)
 Frame = +3

Query: 48  MDLGELWAIFGPGVSGAVFGAGWWFWVDAVVCSSVKVSFVHYLPGIFASVAALMFNCVRR 227
           MDL ELW+IFGPGV+GAVFGAGWWFWVDAVVCSSV VSFVHYLPGIFAS AALMFNCVR+
Sbjct: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRK 60

Query: 228 EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLVQDALVQSGPSAWTGTAGVLQCV 407
           EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLL+QD++V++GPS WTG AGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKAGPSVWTGVAGVLQCV 120

Query: 408 FVLISGLMYWTSHTE 452
           FVL+SGL+YWTSH+E
Sbjct: 121 FVLVSGLIYWTSHSE 135


>ref|XP_002302262.1| predicted protein [Populus trichocarpa] gi|222843988|gb|EEE81535.1|
           predicted protein [Populus trichocarpa]
          Length = 135

 Score =  259 bits (662), Expect = 5e-67
 Identities = 118/135 (87%), Positives = 129/135 (95%)
 Frame = +3

Query: 48  MDLGELWAIFGPGVSGAVFGAGWWFWVDAVVCSSVKVSFVHYLPGIFASVAALMFNCVRR 227
           MDL ELWAI GP V+GAVFG GWWFW+DAVVCSSV VSFVHYLPGIFAS+AALMFNCVR+
Sbjct: 1   MDLPELWAILGPAVAGAVFGTGWWFWIDAVVCSSVTVSFVHYLPGIFASIAALMFNCVRK 60

Query: 228 EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLVQDALVQSGPSAWTGTAGVLQCV 407
           EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLL+QD++V++GPS WTGTAGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSIVKTGPSVWTGTAGVLQCV 120

Query: 408 FVLISGLMYWTSHTE 452
           FVLISGL+YWTSH+E
Sbjct: 121 FVLISGLIYWTSHSE 135


>ref|NP_564477.1| uncharacterized protein [Arabidopsis thaliana]
           gi|297846688|ref|XP_002891225.1| hypothetical protein
           ARALYDRAFT_314063 [Arabidopsis lyrata subsp. lyrata]
           gi|15292703|gb|AAK92720.1| unknown protein [Arabidopsis
           thaliana] gi|19310689|gb|AAL85075.1| unknown protein
           [Arabidopsis thaliana] gi|297337067|gb|EFH67484.1|
           hypothetical protein ARALYDRAFT_314063 [Arabidopsis
           lyrata subsp. lyrata] gi|332193763|gb|AEE31884.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 135

 Score =  253 bits (647), Expect = 3e-65
 Identities = 114/135 (84%), Positives = 126/135 (93%)
 Frame = +3

Query: 48  MDLGELWAIFGPGVSGAVFGAGWWFWVDAVVCSSVKVSFVHYLPGIFASVAALMFNCVRR 227
           MDL ELWAIFGPG SGAVFG GWWFWVDAVVCSS++V FVHYLPGIFAS+ ALMFNCVR+
Sbjct: 1   MDLAELWAIFGPGFSGAVFGTGWWFWVDAVVCSSIQVPFVHYLPGIFASLGALMFNCVRK 60

Query: 228 EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLVQDALVQSGPSAWTGTAGVLQCV 407
           EDIDYSPY+EGEWRLKLWLF AYVV+FVSLAASVGLL+QD++V++GPS WTG AGV QCV
Sbjct: 61  EDIDYSPYDEGEWRLKLWLFIAYVVAFVSLAASVGLLIQDSVVKTGPSTWTGVAGVFQCV 120

Query: 408 FVLISGLMYWTSHTE 452
           FVLISGLMYWTSH+E
Sbjct: 121 FVLISGLMYWTSHSE 135


Top