BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016346
         (1614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   156   2e-35
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   155   3e-35
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   153   1e-34
emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]   148   5e-33
emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]   134   9e-29

>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  156 bits (394), Expect = 2e-35
 Identities = 112/326 (34%), Positives = 170/326 (52%), Gaps = 7/326 (2%)
 Frame = +3

Query: 15  LPEA-HHRRCVGSSGNWLITLGLDSMIRLLNPLSRVQFDLPPRTNF------DYRDLGSG 173
           LPEA H RR  GSS  WL+ L     I LLNPL+R +  LPP + F      ++ D+G  
Sbjct: 80  LPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLPPLSTFPNVVRFNFADVGRE 139

Query: 174 KPLXXXXXXXXXXXXLTPEIYRDIFIHKAIIYPTPSSSSSHNRNCIAVAIHHYLRKLAIA 353
             L               +  RD FI K I+    SSS ++  + IAV I +    LA+ 
Sbjct: 140 YALRTSSGDVYTRSL---KKMRDSFIKKTIL----SSSPANGSDFIAVVILNQTGDLALC 192

Query: 354 RPGDSSWVTVEAPMNFFQDMVFYKGQLYAVTHHGLVAVINIDDDLHSPTASEVMPRFELE 533
           R  D SW  +E   ++ +D++F++G  YAV  +G +AV ++       +  E+  +F   
Sbjct: 193 RKSDDSWTFLEDAQSYAEDVIFHRGLFYAVNKYGSIAVCDVSGSSPRVSIIEMPQQFG-- 250

Query: 534 KLSEFGQKKYLVEWMGELLLVIRFMFDSQWDAEEDKRDKDCPFLYHTKEFKVYKLDFINE 713
                G  +YLVE   ELLLV R++ D  +D E D+       +Y T  F+V +LD    
Sbjct: 251 -----GDLQYLVESGEELLLVTRYL-DLTYDVEPDQTS----LIYRTTRFQVCRLDLKAP 300

Query: 714 KWDALNSLGEYSLFLGENYSVSVLASEFGGVMKKNRIYYTDDYFYGYRATGTEGGRAMGV 893
           +W+ ++SLG+ +LFLGEN S+S+ + +F G  K N IYYTDDY       G  G + +G+
Sbjct: 301 RWEVVSSLGDRALFLGENLSLSLSSVDFPG-CKGNCIYYTDDYSED-NYDGIGGEQDLGI 358

Query: 894 FDMDNKSIQPHYKGISTSLYSPPIWL 971
           F++++ SI+P         + PP+W+
Sbjct: 359 FNLEDGSIEPLPCSHFRIRWPPPLWV 384


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  155 bits (392), Expect = 3e-35
 Identities = 112/326 (34%), Positives = 170/326 (52%), Gaps = 7/326 (2%)
 Frame = +3

Query: 15  LPEA-HHRRCVGSSGNWLITLGLDSMIRLLNPLSRVQFDLPPRTNF------DYRDLGSG 173
           LPEA H RR  GSS  WL+ L     I LLNPL+R +  LPP + F      ++ D+G  
Sbjct: 80  LPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLPPLSTFPNVVRFNFADVGRE 139

Query: 174 KPLXXXXXXXXXXXXLTPEIYRDIFIHKAIIYPTPSSSSSHNRNCIAVAIHHYLRKLAIA 353
             L               +  RD FI K I+    SSS ++  + IAV I +    LA+ 
Sbjct: 140 YALRTSSGDVYTRSL---KKMRDSFIKKTIL----SSSPANGSDFIAVVILNQTGDLALC 192

Query: 354 RPGDSSWVTVEAPMNFFQDMVFYKGQLYAVTHHGLVAVINIDDDLHSPTASEVMPRFELE 533
           R  D SW  +E   ++ +D++F++G  YAV  +G +AV ++       +  E+  +F   
Sbjct: 193 RKSDDSWTFLEDAQSYSEDVIFHRGLFYAVNKYGSIAVCDVSGSSPRVSIIEMPQQFG-- 250

Query: 534 KLSEFGQKKYLVEWMGELLLVIRFMFDSQWDAEEDKRDKDCPFLYHTKEFKVYKLDFINE 713
                G  +YLVE   ELLLV R++ D  +D E D+       +Y T  F+V +LD    
Sbjct: 251 -----GDLQYLVESGEELLLVTRYL-DLTYDVEXDQTS----LIYRTTRFQVCRLDSKAP 300

Query: 714 KWDALNSLGEYSLFLGENYSVSVLASEFGGVMKKNRIYYTDDYFYGYRATGTEGGRAMGV 893
           +W+ ++SLG+ +LFLGEN S+S+ + +F G  K N IYYTDDY       G  G + +G+
Sbjct: 301 RWEVVSSLGDRALFLGENLSLSLSSVDFPG-CKGNCIYYTDDYSED-NYDGIGGEQDLGI 358

Query: 894 FDMDNKSIQPHYKGISTSLYSPPIWL 971
           F++++ SI+P         + PP+W+
Sbjct: 359 FNLEDGSIEPLPCSHFRIRWPPPLWV 384


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 398

 Score =  153 bits (387), Expect = 1e-34
 Identities = 111/331 (33%), Positives = 171/331 (51%), Gaps = 11/331 (3%)
 Frame = +3

Query: 12   DLPEAHHR-RCVGSSGNWLITLGLDSMIRLLNPLSRVQFDLPPRTNF------DYRDLGS 170
            +LPE  +R R  GSS  WL+ L     I L+NPL+R +  LPP ++F      +Y D+G 
Sbjct: 82   NLPEVSYRKRHCGSSHGWLMILDDTPTILLINPLTRAKLSLPPLSSFPNVISFNYSDIGR 141

Query: 171  GKPLXXXXXXXXXXXXLTPEIYRDIFIHKAIIYPTPSSSSSHNRNCIAVAIHHYLRKLAI 350
               L            ++    RD FI K ++    SSS   + N + +AI +    LA 
Sbjct: 142  EYALRNLLGERVT---VSLRQMRDSFIRKVVL----SSSPLKDNNFVVIAILNQTDDLAY 194

Query: 351  ARPGDSSWVTVEAPMNFFQDMVFYKGQLYAVTHHGLVAVINIDDDLHSPTASEVMPRFEL 530
             R GD SW  VE   +F +D++F  G  YAV   G + + +I  D  SP  S     F  
Sbjct: 195  CRNGDKSWSLVENARSFCEDVIFVNGMFYAVNKAGQIVICDISSD--SPRVS-----FME 247

Query: 531  EKLSEFGQKKYLVEWMGELLLVIRFMFDSQWDAEEDKRDKDCPFLYHTKEFKVYKLDFIN 710
                  G  +YLV    ELLLV R++     + E D  D +   +Y T  F+V++LD+  
Sbjct: 248  TPRQAGGDMQYLVNSGDELLLVTRYL---DLEYEFDHPDMEPHLIYRTIRFEVFRLDWNG 304

Query: 711  EKWDALNSLGEYSLFLGENYSVSVLASEFGGVMKKNRIYYTDDYFYGYRATGTEGGRAMG 890
             +W  +++LG+ +LF+GEN S+S+ A++F G M  N IYYTDDY       G  G   +G
Sbjct: 305  PQWLRMSTLGDKALFIGENSSLSLSATDFSGCM-GNCIYYTDDYL-DANYDGHFGDHDLG 362

Query: 891  VFDMDNKSIQP---HYKGISTSL-YSPPIWL 971
            +F + +++I+P   + +  ++ L +SPP+W+
Sbjct: 363  IFKLCDETIEPLPCYPRNFTSPLQWSPPLWV 393


>emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]
          Length = 394

 Score =  148 bits (373), Expect = 5e-33
 Identities = 110/340 (32%), Positives = 164/340 (48%), Gaps = 18/340 (5%)
 Frame = +3

Query: 3   YEFDLPEAHHRRCVGSSGNWLITLG--LDSMIRLLNPLSRVQFDLPPRTNFDYRDLGSGK 176
           Y+  +P    + C  S   WLIT+       I  LNP+S VQ DLPP   F+     S  
Sbjct: 81  YKIQIPAMRDKWCCNSWNGWLITINHTFPYEICCLNPISGVQIDLPPAITFE----DSPP 136

Query: 177 PLXXXXXXXXXXXXLTPEIYRDIFIHKAIIYPTPSSSSSHNRNCIAVAIHHYLRKLAIAR 356
            L               E   + F++K ++  TPS S   N NC+ +AIH    KLA  +
Sbjct: 137 DLD--------------ETPIEFFLNKVVLSSTPSPS---NANCVIMAIHSNYNKLAFCK 179

Query: 357 PGDSSWVTVEAPMNFFQDMVFYKGQLYAVTHHGLVAVINIDDDLHSPTASEVMPRFELEK 536
           PGD  W+T+++    ++D+++YK   YA+    +V   +I DD        V+P   L K
Sbjct: 180 PGDKRWITLKSEDIQYKDLLYYKDNFYAIGRSKVVQ-CDIGDD------PRVIPFALLPK 232

Query: 537 LSEFGQKKYLVEWMGELLLVIRFM--FDSQ--------------WDAEEDKRDKDCPFLY 668
           +  F Q +YLVE  G LL V+R+M   D++              +D + DKR     + Y
Sbjct: 233 MGYF-QYRYLVESSGCLLYVLRYMDLKDNEDPLKLRYETTGFKVFDLDSDKR--KFSYRY 289

Query: 669 HTKEFKVYKLDFINEKWDALNSLGEYSLFLGENYSVSVLASEFGGVMKKNRIYYTDDYFY 848
            T  FKVY  DF  +KW  + ++ E +L LG N ++S+   +F G  K N IY+ DDY  
Sbjct: 290 ETTTFKVYNFDFDQKKWKLIKNIKEKALLLGHNQAISISTKKFDG-FKSNHIYFLDDYKE 348

Query: 849 GYRATGTEGGRAMGVFDMDNKSIQPHYKGISTSLYSPPIW 968
           GY    T G   MGVF++     +P +    T L++ P++
Sbjct: 349 GY-FENTYGCHDMGVFNIKTHLFKPIFH--RTQLWASPLF 385


>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score =  134 bits (336), Expect = 9e-29
 Identities = 100/331 (30%), Positives = 155/331 (46%), Gaps = 8/331 (2%)
 Frame = +3

Query: 3    YEFDLPEAHHRRCVGSSGNWLITLGLDSMIRLLNPLSRVQFDLPP-------RTNFDYRD 161
            YE  LPE   + C GS   WL+T+G D  + LLNPL+RVQ  LP         T  D   
Sbjct: 994  YEIRLPEVVGKWCWGSPYGWLVTIGTDLDMCLLNPLTRVQILLPSLRACPNLNTLIDSST 1053

Query: 162  LGSGKPLXXXXXXXXXXXXLTPEIYRDIFIHKAIIYPTPSSSSSHNRNCIAVAIHHYLRK 341
             GS                      +DIFI+KA++   PSS      +C  + I+    +
Sbjct: 1054 QGSRS--------------------KDIFIYKAVLSSAPSSP-----DCAVMIIYSDYGR 1088

Query: 342  LAIARPGDSSWVTVEAPMNFFQDMVFYKGQLYAVTHHGLVAVINIDDDLHSPTASEVMPR 521
            LA  +PG  +W  +E+      D++++ G   AV     V + +I             P 
Sbjct: 1089 LAFTKPGHQTWTLLESESGPVDDIIYFNGSFLAVNLSWEVWICDISGSQLKTIRFAAAPA 1148

Query: 522  FELEKLSEFGQKKYLVEWMGELLLVIRFMFDSQWDAEEDKRDKDCPFLYHTKEFKVYKLD 701
             +     E+ + KYLVE  GE+ +V R ++D+          +D P++  T  F V KLD
Sbjct: 1149 LQDVDEIEY-EAKYLVESGGEIYMVTRNLYDTA--------RRDIPYM-RTWTFSVLKLD 1198

Query: 702  FINEKWDALNSLGEYSLFLGENYSVSVLASEFGGVMKKNRIYYTDDYFYGYRATGTEGGR 881
              N++W+ + +L   S FLG N+S S  AS++    +KN IY+TDDY  G+         
Sbjct: 1199 MCNKRWEEVENLDHCSFFLGNNHSFSTWASDY-PEFRKNSIYFTDDY-CGF--LNIPRNF 1254

Query: 882  AMGVFDMDNKSIQPHYKG-ISTSLYSPPIWL 971
             MG+++  N  I+ +  G  + S++S P+W+
Sbjct: 1255 DMGIYNFQNTQIEHYPVGHDALSMFSAPLWI 1285