BLASTX nr result

ID: Cimicifuga21_contig00016335 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016335
         (1118 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301150.1| predicted protein [Populus trichocarpa] gi|2...   483   e-134
ref|XP_002510099.1| E3 ubiquitin ligase PUB14, putative [Ricinus...   480   e-133
ref|XP_004142891.1| PREDICTED: U-box domain-containing protein 4...   479   e-133
emb|CBI19404.3| unnamed protein product [Vitis vinifera]              476   e-132
ref|XP_003550308.1| PREDICTED: U-box domain-containing protein 4...   469   e-130

>ref|XP_002301150.1| predicted protein [Populus trichocarpa] gi|222842876|gb|EEE80423.1|
            predicted protein [Populus trichocarpa]
          Length = 348

 Score =  483 bits (1242), Expect = e-134
 Identities = 246/301 (81%), Positives = 280/301 (93%)
 Frame = +2

Query: 215  AFSDCNSDRSGEFPTGSSQNRRFLIACASENSDSLIRQLVSDLESCSIDVQKQAAMEIRL 394
            AFSDCNSD+SGEFP  +SQ+RR L++CA++NSD LIRQLVSDLESCSID QKQAAMEIRL
Sbjct: 29   AFSDCNSDKSGEFPASASQSRRLLLSCAADNSDDLIRQLVSDLESCSIDEQKQAAMEIRL 88

Query: 395  IAKNKPENRIMIAREGAVRPLISLISSPDSQLQEYVVTAILNLSLCDENKDLIANSGAIK 574
            +AKNKPENR+ IA+ GA++PLISLISS DSQLQEY VTAILNLSLCDENK LIA+SGAIK
Sbjct: 89   LAKNKPENRLKIAKAGAIKPLISLISSSDSQLQEYGVTAILNLSLCDENKGLIASSGAIK 148

Query: 575  PLVRALKTGTATAKENAACALIRLSEVEDHKIAIGRSEAIPLLVNLLENGGFRGKKDAST 754
            PLVRALKTGT+TAKENAACAL+RLS++E++K+AIGRS AIPLLV LLE GGFRGKKD++T
Sbjct: 149  PLVRALKTGTSTAKENAACALLRLSQMEENKVAIGRSGAIPLLVCLLETGGFRGKKDSAT 208

Query: 755  ALYMLCSVKENKLRAVQAGIMKPIVELMADFGSGMVDKAAFVLSRLVSIPEGKTAVVEEG 934
            ALY+LCSVKENK+RAVQAGIMKP+VELMADFGS MVDK+AFVLS LV++PE KTAVVEE 
Sbjct: 209  ALYLLCSVKENKIRAVQAGIMKPLVELMADFGSNMVDKSAFVLSMLVTVPEAKTAVVEEA 268

Query: 935  GIPVLVEIVEVGLQRQKEISTAILLQICEDSLMYRNMVAREGAIPPLVALSQSGTTRAKQ 1114
            GIPVLVEIVEVG QRQKEI+ +ILLQICED+++Y +MVAREGAIPPLVALSQSGT RAKQ
Sbjct: 269  GIPVLVEIVEVGSQRQKEIAVSILLQICEDNMVYCSMVAREGAIPPLVALSQSGTNRAKQ 328

Query: 1115 K 1117
            K
Sbjct: 329  K 329


>ref|XP_002510099.1| E3 ubiquitin ligase PUB14, putative [Ricinus communis]
            gi|223550800|gb|EEF52286.1| E3 ubiquitin ligase PUB14,
            putative [Ricinus communis]
          Length = 352

 Score =  480 bits (1236), Expect = e-133
 Identities = 252/330 (76%), Positives = 284/330 (86%)
 Frame = +2

Query: 128  METDIPSSYTYMXXXXXXXXXXXXXXXXXAFSDCNSDRSGEFPTGSSQNRRFLIACASEN 307
            ME +  +S+TYM                 AFSDCNSDRSGEFPT SS++RR LIACA+EN
Sbjct: 1    MEMETRASFTYMGRSFGNTSVNDDSS---AFSDCNSDRSGEFPTASSESRRLLIACAAEN 57

Query: 308  SDSLIRQLVSDLESCSIDVQKQAAMEIRLIAKNKPENRIMIAREGAVRPLISLISSPDSQ 487
            SD  IRQLV DLESCSID QKQAAMEIRL+AKNKPENR+ I + GA++PLISLIS  DSQ
Sbjct: 58   SDDFIRQLVLDLESCSIDEQKQAAMEIRLLAKNKPENRLKIVKAGALKPLISLISCSDSQ 117

Query: 488  LQEYVVTAILNLSLCDENKDLIANSGAIKPLVRALKTGTATAKENAACALIRLSEVEDHK 667
            LQEY VTAILNLSLCDENK++IA+SGAIKPLVRALKTGT+TAKENAACAL+RLS+VE++K
Sbjct: 118  LQEYGVTAILNLSLCDENKEVIASSGAIKPLVRALKTGTSTAKENAACALLRLSQVEENK 177

Query: 668  IAIGRSEAIPLLVNLLENGGFRGKKDASTALYMLCSVKENKLRAVQAGIMKPIVELMADF 847
            +AIGRS +IPLLVNLLE GGFRGKKDA+TALY LCSVKENK+RAVQAGIMKP+VELMADF
Sbjct: 178  VAIGRSGSIPLLVNLLETGGFRGKKDAATALYSLCSVKENKMRAVQAGIMKPLVELMADF 237

Query: 848  GSGMVDKAAFVLSRLVSIPEGKTAVVEEGGIPVLVEIVEVGLQRQKEISTAILLQICEDS 1027
             S MVDK+AFVLS LVS+ E +TA+VEEGGIPVLVEI+EVG QRQKEI+ AILLQICED+
Sbjct: 238  ESNMVDKSAFVLSLLVSVTEARTALVEEGGIPVLVEIIEVGSQRQKEIAVAILLQICEDN 297

Query: 1028 LMYRNMVAREGAIPPLVALSQSGTTRAKQK 1117
            LM R MV REGAIPPL+ALSQSGT RAKQK
Sbjct: 298  LMRRAMVVREGAIPPLIALSQSGTNRAKQK 327


>ref|XP_004142891.1| PREDICTED: U-box domain-containing protein 4-like [Cucumis sativus]
            gi|449482708|ref|XP_004156379.1| PREDICTED: U-box
            domain-containing protein 4-like [Cucumis sativus]
          Length = 352

 Score =  479 bits (1234), Expect = e-133
 Identities = 254/330 (76%), Positives = 283/330 (85%)
 Frame = +2

Query: 128  METDIPSSYTYMXXXXXXXXXXXXXXXXXAFSDCNSDRSGEFPTGSSQNRRFLIACASEN 307
            M T+ P ++TYM                 AFSDCNSDRSGEFPT SSQ+RR LIACAS+N
Sbjct: 1    MGTENPMNFTYMGRTFDDLSNGDSSG---AFSDCNSDRSGEFPTASSQSRRLLIACASDN 57

Query: 308  SDSLIRQLVSDLESCSIDVQKQAAMEIRLIAKNKPENRIMIAREGAVRPLISLISSPDSQ 487
            SD LIR LV DLESCSI+ QKQAAMEIRL+AKNKPENR+ IA+ GAVRPLISLIS  D Q
Sbjct: 58   SDELIRHLVLDLESCSIEEQKQAAMEIRLLAKNKPENRLKIAKAGAVRPLISLISCTDPQ 117

Query: 488  LQEYVVTAILNLSLCDENKDLIANSGAIKPLVRALKTGTATAKENAACALIRLSEVEDHK 667
            LQEY VTAILNLSLCDENK+LIA SGAIKPLVRAL +GT TAKENAACAL+RLS++E++K
Sbjct: 118  LQEYGVTAILNLSLCDENKELIAASGAIKPLVRALMSGTPTAKENAACALLRLSQMEENK 177

Query: 668  IAIGRSEAIPLLVNLLENGGFRGKKDASTALYMLCSVKENKLRAVQAGIMKPIVELMADF 847
            IAIGRS AIPLLVNLLENGGFRGKKDASTALY LCSVKENK+RAV+AGIM+P+VELMADF
Sbjct: 178  IAIGRSGAIPLLVNLLENGGFRGKKDASTALYSLCSVKENKIRAVKAGIMRPLVELMADF 237

Query: 848  GSGMVDKAAFVLSRLVSIPEGKTAVVEEGGIPVLVEIVEVGLQRQKEISTAILLQICEDS 1027
            GS MVDK+AFVLS LVS+ E ++A+VEEGGIPVLVE+VE G QRQKEI+  ILLQICEDS
Sbjct: 238  GSNMVDKSAFVLSVLVSMSEARSALVEEGGIPVLVELVEDGTQRQKEIAAVILLQICEDS 297

Query: 1028 LMYRNMVAREGAIPPLVALSQSGTTRAKQK 1117
            ++YR MVAREGAIPPLVALSQSGT RAKQK
Sbjct: 298  VLYRTMVAREGAIPPLVALSQSGTNRAKQK 327


>emb|CBI19404.3| unnamed protein product [Vitis vinifera]
          Length = 388

 Score =  476 bits (1225), Expect = e-132
 Identities = 250/332 (75%), Positives = 282/332 (84%)
 Frame = +2

Query: 122  ASMETDIPSSYTYMXXXXXXXXXXXXXXXXXAFSDCNSDRSGEFPTGSSQNRRFLIACAS 301
            +S ET+IP++Y YM                  FSDCNSDRSGEFPT SSQ RR L+ACA+
Sbjct: 37   SSTETEIPANYIYMGQSSGDHNDYSS-----TFSDCNSDRSGEFPTTSSQGRRLLLACAA 91

Query: 302  ENSDSLIRQLVSDLESCSIDVQKQAAMEIRLIAKNKPENRIMIAREGAVRPLISLISSPD 481
            +N D LIRQLVSDL SCSID QKQAAMEIRL+AKNKPENR+ IA  GA++PLISLISS D
Sbjct: 92   DNCDDLIRQLVSDLNSCSIDEQKQAAMEIRLLAKNKPENRLKIAGAGAIKPLISLISSSD 151

Query: 482  SQLQEYVVTAILNLSLCDENKDLIANSGAIKPLVRALKTGTATAKENAACALIRLSEVED 661
            +QLQE  VTAILNLSLCDENK+LIA+SGAIKPLVRALKTGT+TAKENAACAL+RLS++E+
Sbjct: 152  AQLQENGVTAILNLSLCDENKELIASSGAIKPLVRALKTGTSTAKENAACALLRLSQIEE 211

Query: 662  HKIAIGRSEAIPLLVNLLENGGFRGKKDASTALYMLCSVKENKLRAVQAGIMKPIVELMA 841
            +KI IG + AIPLLVNLL  G FRGKKDAST LY LCSVKENK+RA+QAGIMKP+VELMA
Sbjct: 212  NKIVIGMAGAIPLLVNLLGYGSFRGKKDASTTLYSLCSVKENKIRAIQAGIMKPLVELMA 271

Query: 842  DFGSGMVDKAAFVLSRLVSIPEGKTAVVEEGGIPVLVEIVEVGLQRQKEISTAILLQICE 1021
            DFGS MVDKAA+VLS+LVS+PEGKT++VEE GIPVLVEI+E G QRQKEI+ AILLQICE
Sbjct: 272  DFGSNMVDKAAYVLSQLVSLPEGKTSLVEEDGIPVLVEILEDGSQRQKEIAVAILLQICE 331

Query: 1022 DSLMYRNMVAREGAIPPLVALSQSGTTRAKQK 1117
            DSL YRNMVAREGAIPPLVALSQS   R+KQK
Sbjct: 332  DSLAYRNMVAREGAIPPLVALSQSSANRSKQK 363


>ref|XP_003550308.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 352

 Score =  469 bits (1206), Expect = e-130
 Identities = 242/301 (80%), Positives = 273/301 (90%)
 Frame = +2

Query: 215  AFSDCNSDRSGEFPTGSSQNRRFLIACASENSDSLIRQLVSDLESCSIDVQKQAAMEIRL 394
            AFSDCNSDRSGEF T SSQ RRFLIACA+ENSD LIRQLV+DL S SID QKQAAMEIRL
Sbjct: 26   AFSDCNSDRSGEFATASSQTRRFLIACATENSDDLIRQLVADLHSSSIDDQKQAAMEIRL 85

Query: 395  IAKNKPENRIMIAREGAVRPLISLISSPDSQLQEYVVTAILNLSLCDENKDLIANSGAIK 574
            +AKNKPENRI IA+ GA++PLISLISSPD QLQEY VTAILNLSLCDENK++IA+SGAIK
Sbjct: 86   LAKNKPENRIKIAKAGAIKPLISLISSPDLQLQEYGVTAILNLSLCDENKEVIASSGAIK 145

Query: 575  PLVRALKTGTATAKENAACALIRLSEVEDHKIAIGRSEAIPLLVNLLENGGFRGKKDAST 754
            PLVRAL +GTATAKENAACAL+RLS+VE++K AIGRS AIPLLV+LLE+GGFR KKDAST
Sbjct: 146  PLVRALNSGTATAKENAACALLRLSQVEENKAAIGRSGAIPLLVSLLESGGFRAKKDAST 205

Query: 755  ALYMLCSVKENKLRAVQAGIMKPIVELMADFGSGMVDKAAFVLSRLVSIPEGKTAVVEEG 934
            ALY LC+VKENK+RAV+AGIMK +VELMADF S MVDK+A+V+S LV++PE + A+VEEG
Sbjct: 206  ALYSLCTVKENKIRAVKAGIMKVLVELMADFESNMVDKSAYVVSVLVAVPEARVALVEEG 265

Query: 935  GIPVLVEIVEVGLQRQKEISTAILLQICEDSLMYRNMVAREGAIPPLVALSQSGTTRAKQ 1114
            G+PVLVEIVEVG QRQKEI+  ILLQ+CEDS+ YR MVAREGAIPPLVALSQSGT RAKQ
Sbjct: 266  GVPVLVEIVEVGTQRQKEIAVVILLQVCEDSVTYRTMVAREGAIPPLVALSQSGTNRAKQ 325

Query: 1115 K 1117
            K
Sbjct: 326  K 326


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