BLASTX nr result

ID: Cimicifuga21_contig00016271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016271
         (734 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284235.1| PREDICTED: uncharacterized protein LOC100257...   253   4e-65
emb|CBI29820.3| unnamed protein product [Vitis vinifera]              244   1e-62
ref|XP_002533439.1| conserved hypothetical protein [Ricinus comm...   222   5e-56
ref|XP_003518131.1| PREDICTED: uncharacterized protein LOC100792...   205   7e-51
ref|XP_002308021.1| predicted protein [Populus trichocarpa] gi|2...   204   1e-50

>ref|XP_002284235.1| PREDICTED: uncharacterized protein LOC100257201 [Vitis vinifera]
          Length = 262

 Score =  253 bits (645), Expect = 4e-65
 Identities = 135/237 (56%), Positives = 176/237 (74%), Gaps = 4/237 (1%)
 Frame = +2

Query: 35  MKLEELNLYRSNS-CRNTKKILPSNYGHSSAYH-HVSDKPLVPTYRVIPLTRWYKV-HSM 205
           MK E+L L+RS+S CR+T+KILPS Y  SS+    +SDK LVP        R  +  +S+
Sbjct: 1   MKQEQLTLHRSSSSCRSTRKILPSTYTRSSSESGDISDKLLVPRDSSPAFPRLARTRNSI 60

Query: 206 VGMFEFFVRLVSFSSMVRTCRWLSNPGKMLVSSPRLGRKVTGTLFGNKLGHISFAVQEDP 385
             +    + ++SF +++ TCRWLS P  + ++ P LGRKVTGTLFG++ GH+SFAVQ+DP
Sbjct: 61  SALLRSLLGVISFPTIIPTCRWLSIPNHLSIT-PSLGRKVTGTLFGHRRGHVSFAVQDDP 119

Query: 386 KSEPMLLLELATPTCMLVKAISSGLVRIGLECERPSDGGRITKLLQEPMWTMYCNGKKCG 565
           +SEP+LLLELAT T  LVK +SSGLVRI LECE+ +  GR  KL QEPMWTMYCNG+KCG
Sbjct: 120 RSEPVLLLELATSTSTLVKEMSSGLVRIALECEKVAARGRPVKLFQEPMWTMYCNGRKCG 179

Query: 566 HAVSRTCVESDRFLLTTVQTVKAGAGIIPTNKNLNR-NGLEGELMYMRARFERVVGN 733
           +A+SR C E DR +L+TVQ+V AGAG+IPT+ N     G+EGE++YMRARFERVVG+
Sbjct: 180 YAMSRECGEFDRHVLSTVQSVSAGAGVIPTDDNRKSIVGVEGEMLYMRARFERVVGS 236


>emb|CBI29820.3| unnamed protein product [Vitis vinifera]
          Length = 279

 Score =  244 bits (623), Expect = 1e-62
 Identities = 128/225 (56%), Positives = 167/225 (74%), Gaps = 3/225 (1%)
 Frame = +2

Query: 68  NSCRNTKKILPSNYGHSSAYH-HVSDKPLVPTYRVIPLTRWYKV-HSMVGMFEFFVRLVS 241
           +SCR+T+KILPS Y  SS+    +SDK LVP        R  +  +S+  +    + ++S
Sbjct: 30  SSCRSTRKILPSTYTRSSSESGDISDKLLVPRDSSPAFPRLARTRNSISALLRSLLGVIS 89

Query: 242 FSSMVRTCRWLSNPGKMLVSSPRLGRKVTGTLFGNKLGHISFAVQEDPKSEPMLLLELAT 421
           F +++ TCRWLS P  + ++ P LGRKVTGTLFG++ GH+SFAVQ+DP+SEP+LLLELAT
Sbjct: 90  FPTIIPTCRWLSIPNHLSIT-PSLGRKVTGTLFGHRRGHVSFAVQDDPRSEPVLLLELAT 148

Query: 422 PTCMLVKAISSGLVRIGLECERPSDGGRITKLLQEPMWTMYCNGKKCGHAVSRTCVESDR 601
            T  LVK +SSGLVRI LECE+ +  GR  KL QEPMWTMYCNG+KCG+A+SR C E DR
Sbjct: 149 STSTLVKEMSSGLVRIALECEKVAARGRPVKLFQEPMWTMYCNGRKCGYAMSRECGEFDR 208

Query: 602 FLLTTVQTVKAGAGIIPTNKNLNR-NGLEGELMYMRARFERVVGN 733
            +L+TVQ+V AGAG+IPT+ N     G+EGE++YMRARFERVVG+
Sbjct: 209 HVLSTVQSVSAGAGVIPTDDNRKSIVGVEGEMLYMRARFERVVGS 253


>ref|XP_002533439.1| conserved hypothetical protein [Ricinus communis]
           gi|223526713|gb|EEF28946.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 276

 Score =  222 bits (566), Expect = 5e-56
 Identities = 123/239 (51%), Positives = 167/239 (69%), Gaps = 16/239 (6%)
 Frame = +2

Query: 65  SNSCRNTKKILPSNYGHSSAYHH--------VSDKPLV--PTYRVIPLTRWYKVHSMVG- 211
           S+S R+T+K++PSNY  S++  H        +SDK L+   +   + L R  K+HS    
Sbjct: 13  SSSSRSTRKVIPSNYMRSTSTPHPTVPEREDISDKLLLRRDSPAAVSLQRLNKLHSRFSS 72

Query: 212 MFEFFVRLVSFSSMV-RTCRWLSNPGKMLVSSPRLGRKVTGTLFGNKLGHISFAVQEDPK 388
           +     ++V+F +++  TC+WLS P  + + S  LGRKVTGTLFG++ GH+SFAVQ+DP+
Sbjct: 73  LLRSIFKIVAFPNIIIPTCKWLSIPTHLSIKSS-LGRKVTGTLFGHRRGHVSFAVQDDPR 131

Query: 389 SEPMLLLELATPTCMLVKAISSGLVRIGLECER---PSDGGRITKLLQEPMWTMYCNGKK 559
           SEP+LLLELA  T  LVK +SSGLVRI LEC++   P++G R  KL  EP WTMYCNG+K
Sbjct: 132 SEPVLLLELAMSTSTLVKEMSSGLVRIALECDKVQVPTNGTRSGKLFNEPTWTMYCNGRK 191

Query: 560 CGHAVSRTCVESDRFLLTTVQTVKAGAGIIPTNKNLNRN-GLEGELMYMRARFERVVGN 733
           CG+AVSRTC E D  +L TVQ+V  GAG+IP  ++  +N G EGEL+YMRA+FERVVG+
Sbjct: 192 CGYAVSRTCTELDWHVLNTVQSVSVGAGVIPMVEDGRKNAGSEGELLYMRAKFERVVGS 250


>ref|XP_003518131.1| PREDICTED: uncharacterized protein LOC100792802 [Glycine max]
          Length = 294

 Score =  205 bits (522), Expect = 7e-51
 Identities = 119/251 (47%), Positives = 158/251 (62%), Gaps = 32/251 (12%)
 Frame = +2

Query: 77  RNTKKILPSNYGHSSAYHH--VSDKPLV----------------PTYRVIPLTRWYKVHS 202
           RN+++ILPSN  H  ++    VSDK LV                  +    LT+  K+ S
Sbjct: 22  RNSRRILPSNLTHFRSFESDDVSDKLLVRRGSSPSVSNLYQQQQQQHHAPKLTQQNKISS 81

Query: 203 MVGMFEFFVRLVSFSSMVRTCRWLSNPGKMLVSSPRLGRKVTGTLFGNKLGHISFAVQED 382
           ++     F+ + +F +M+ TC+WL+ P ++ V+ P LGRKVTGTLFG++ GHISFAVQ  
Sbjct: 82  LI---RSFLNIFTFPTMIPTCKWLTIPSQLSVT-PSLGRKVTGTLFGHRRGHISFAVQLH 137

Query: 383 PKSEPMLLLELATPTCMLVKAISSGLVRIGLECERPS---------DGGRITKLLQEPMW 535
           P++EP+LLLELA  T  LVK +SS LVRI LEC++ S          GG   +L QEP W
Sbjct: 138 PRAEPVLLLELAMSTSSLVKEMSSSLVRIALECQKVSVTAAVAHNNSGGGRRRLFQEPAW 197

Query: 536 TMYCNGKKCGHAVSRTCVESDRFLLTTVQTVKAGAGIIPTNKN-----LNRNGLEGELMY 700
           TMYCNG+ CG+AVSRTC + D  +L+TVQ+V  GAG+IP  ++         G EGELMY
Sbjct: 198 TMYCNGRNCGYAVSRTCGDLDLHVLSTVQSVSVGAGVIPLLEDGKGGGSGNGGSEGELMY 257

Query: 701 MRARFERVVGN 733
           MRARFERVVG+
Sbjct: 258 MRARFERVVGS 268


>ref|XP_002308021.1| predicted protein [Populus trichocarpa] gi|222853997|gb|EEE91544.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score =  204 bits (520), Expect = 1e-50
 Identities = 104/180 (57%), Positives = 135/180 (75%), Gaps = 7/180 (3%)
 Frame = +2

Query: 215 FEFFVRLVSFSSMV--RTCRWLSNPGKMLVSSPRLGRKVTGTLFGNKLGHISFAVQEDPK 388
           F   ++++SF +++  +TC+WLS P + L  +P LGRKVTGTLFGN+ GH+SFAVQ+DP 
Sbjct: 10  FRSILKIISFPNIIIPKTCKWLSTPTQYLSLTPSLGRKVTGTLFGNRHGHVSFAVQDDPG 69

Query: 389 SEPMLLLELATPTCMLVKAISSGLVRIGLECER----PSDGGRITKLLQEPMWTMYCNGK 556
           SEP+LLLEL+  T MLVK +SSGLVRI LECE+        GR  KL  EP WTMYCNG+
Sbjct: 70  SEPVLLLELSISTAMLVKEMSSGLVRIALECEKVRAPQVQTGRPGKLFNEPTWTMYCNGR 129

Query: 557 KCGHAVSRTCVESDRFLLTTVQTVKAGAGIIPTNKNLNRN-GLEGELMYMRARFERVVGN 733
           KCG+AVSR C  SD ++L TVQ+V  GAG+IP  ++  ++ G EGEL+YMRA+FERVVG+
Sbjct: 130 KCGYAVSRRCTYSDWYVLGTVQSVSVGAGVIPVVEDGRKSGGGEGELLYMRAKFERVVGS 189


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