BLASTX nr result

ID: Cimicifuga21_contig00016237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016237
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331599.1| predicted protein [Populus trichocarpa] gi|2...   263   2e-68
ref|XP_002309707.1| predicted protein [Populus trichocarpa] gi|2...   263   2e-68
ref|XP_003552483.1| PREDICTED: cysteine protease ATG4-like [Glyc...   262   3e-68
ref|NP_001054293.1| Os04g0682000 [Oryza sativa Japonica Group] g...   261   5e-68
gb|EEE61922.1| hypothetical protein OsJ_16662 [Oryza sativa Japo...   261   5e-68

>ref|XP_002331599.1| predicted protein [Populus trichocarpa] gi|222873995|gb|EEF11126.1|
           predicted protein [Populus trichocarpa]
          Length = 482

 Score =  263 bits (671), Expect = 2e-68
 Identities = 128/176 (72%), Positives = 148/176 (84%), Gaps = 2/176 (1%)
 Frame = -3

Query: 522 FSRDFSSRIWMTYRKGFDTIGDSKFTSDVNWGCMLRSSQMLVAQALLFHHLGRSWRKPLD 343
           F+ DFSSRI +TYRKGFD I DSK TSDV+WGCMLRSSQMLVAQALLFH LGRSWRKPLD
Sbjct: 142 FNHDFSSRILITYRKGFDAIEDSKLTSDVSWGCMLRSSQMLVAQALLFHRLGRSWRKPLD 201

Query: 342 KPFSQEYIEILDLFGDSEASAFSIHNLLEVGKAYGLVAGSWIGPYAMCRSWETLSRTKRE 163
           KP  +EY+EIL LFGDSE+SAFSIHNLL  GKAYGL AGSW+GPYA+C SWE+L R++RE
Sbjct: 202 KPLDREYVEILHLFGDSESSAFSIHNLLRAGKAYGLAAGSWVGPYAVCHSWESLVRSRRE 261

Query: 162 KS--DKQSSSMIVYVVSGDENGERGGAPVVCVEDVAKLCSESCEGQVVSKPILLLV 1
           ++  + QS SM VYVVSG E+GERGGAPV+C+E+ A+ CSE  +GQ    PILLLV
Sbjct: 262 ETNLEYQSLSMAVYVVSGSEDGERGGAPVLCIEEAARHCSEFSKGQEDWTPILLLV 317


>ref|XP_002309707.1| predicted protein [Populus trichocarpa] gi|222852610|gb|EEE90157.1|
           predicted protein [Populus trichocarpa]
          Length = 481

 Score =  263 bits (671), Expect = 2e-68
 Identities = 129/176 (73%), Positives = 149/176 (84%), Gaps = 2/176 (1%)
 Frame = -3

Query: 522 FSRDFSSRIWMTYRKGFDTIGDSKFTSDVNWGCMLRSSQMLVAQALLFHHLGRSWRKPLD 343
           F RDFSSRI +TYRKGFD I DSK TSDVNWGCMLRSSQMLVAQALLFH LGRSWRKP+D
Sbjct: 141 FHRDFSSRILITYRKGFDMIEDSKLTSDVNWGCMLRSSQMLVAQALLFHRLGRSWRKPVD 200

Query: 342 KPFSQEYIEILDLFGDSEASAFSIHNLLEVGKAYGLVAGSWIGPYAMCRSWETLSRTKRE 163
           KP  ++Y+EIL LFGDSEASAFSIHNLL+ GKAYGL AGSW+GPYAMCRSWE+L+R+KRE
Sbjct: 201 KPLDRDYVEILHLFGDSEASAFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWESLARSKRE 260

Query: 162 KS--DKQSSSMIVYVVSGDENGERGGAPVVCVEDVAKLCSESCEGQVVSKPILLLV 1
           ++  + Q+  M VYVVSG E+GERGGAPV+ +ED A+ CSE  +G+    PILLLV
Sbjct: 261 ETNLEYQTLPMAVYVVSGCEDGERGGAPVLSIEDAARHCSEFSKGREDWTPILLLV 316


>ref|XP_003552483.1| PREDICTED: cysteine protease ATG4-like [Glycine max]
          Length = 485

 Score =  262 bits (669), Expect = 3e-68
 Identities = 123/174 (70%), Positives = 143/174 (82%)
 Frame = -3

Query: 522 FSRDFSSRIWMTYRKGFDTIGDSKFTSDVNWGCMLRSSQMLVAQALLFHHLGRSWRKPLD 343
           F +DFSS+I +TYRKGFD IGD+K+TSDVNWGCMLRSSQMLVAQALLFH LGRSWRKP+D
Sbjct: 142 FEQDFSSKILVTYRKGFDAIGDTKYTSDVNWGCMLRSSQMLVAQALLFHKLGRSWRKPID 201

Query: 342 KPFSQEYIEILDLFGDSEASAFSIHNLLEVGKAYGLVAGSWIGPYAMCRSWETLSRTKRE 163
           KP  +EYI++L LFGDSEASAFSIHNLL+ GK YGL  GSW+GPYAMCR+WE L+R K +
Sbjct: 202 KPLDKEYIDVLQLFGDSEASAFSIHNLLQAGKGYGLAVGSWVGPYAMCRTWEVLARKKND 261

Query: 162 KSDKQSSSMIVYVVSGDENGERGGAPVVCVEDVAKLCSESCEGQVVSKPILLLV 1
             +     M +YVVSGDE+GERGGAPVVC+ED +K CSE   G  V  P+LLLV
Sbjct: 262 LGE-PPLPMAIYVVSGDEDGERGGAPVVCIEDASKRCSEFSSGLAVWTPLLLLV 314


>ref|NP_001054293.1| Os04g0682000 [Oryza sativa Japonica Group]
           gi|75143803|sp|Q7XPW8.1|ATG4B_ORYSJ RecName:
           Full=Cysteine protease ATG4B; AltName:
           Full=Autophagy-related protein 4 homolog B
           gi|32488637|emb|CAE03430.1| OSJNBa0032F06.13 [Oryza
           sativa Japonica Group] gi|82470053|gb|ABB77259.1|
           autophagy 4 [Oryza sativa Indica Group]
           gi|113565864|dbj|BAF16207.1| Os04g0682000 [Oryza sativa
           Japonica Group] gi|215697216|dbj|BAG91210.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 478

 Score =  261 bits (667), Expect = 5e-68
 Identities = 122/178 (68%), Positives = 147/178 (82%), Gaps = 4/178 (2%)
 Frame = -3

Query: 522 FSRDFSSRIWMTYRKGFDTIGDSKFTSDVNWGCMLRSSQMLVAQALLFHHLGRSWRKPLD 343
           F  DFSSRIW+TYR+GFD I DSK+TSDVNWGCM+RSSQMLVAQAL+FHHLGRSWR+PL+
Sbjct: 132 FLEDFSSRIWITYRRGFDAISDSKYTSDVNWGCMVRSSQMLVAQALIFHHLGRSWRRPLE 191

Query: 342 KPFSQEYIEILDLFGDSEASAFSIHNLLEVGKAYGLVAGSWIGPYAMCRSWETLSRTKRE 163
           KP++ EYI IL +FGDSEA AFSIHNLL+ G +YGL AGSW+GPYAMCR+W+TL RT RE
Sbjct: 192 KPYNPEYIGILHMFGDSEACAFSIHNLLQAGNSYGLAAGSWVGPYAMCRAWQTLVRTNRE 251

Query: 162 KSD----KQSSSMIVYVVSGDENGERGGAPVVCVEDVAKLCSESCEGQVVSKPILLLV 1
           + +     +S  M +YVVSGDE+GERGGAPVVC++  A+LC +  +GQ    PILLLV
Sbjct: 252 QHEVVDGNESFPMALYVVSGDEDGERGGAPVVCIDVAAQLCCDFNKGQSTWSPILLLV 309


>gb|EEE61922.1| hypothetical protein OsJ_16662 [Oryza sativa Japonica Group]
          Length = 892

 Score =  261 bits (667), Expect = 5e-68
 Identities = 122/178 (68%), Positives = 147/178 (82%), Gaps = 4/178 (2%)
 Frame = -3

Query: 522 FSRDFSSRIWMTYRKGFDTIGDSKFTSDVNWGCMLRSSQMLVAQALLFHHLGRSWRKPLD 343
           F  DFSSRIW+TYR+GFD I DSK+TSDVNWGCM+RSSQMLVAQAL+FHHLGRSWR+PL+
Sbjct: 132 FLEDFSSRIWITYRRGFDAISDSKYTSDVNWGCMVRSSQMLVAQALIFHHLGRSWRRPLE 191

Query: 342 KPFSQEYIEILDLFGDSEASAFSIHNLLEVGKAYGLVAGSWIGPYAMCRSWETLSRTKRE 163
           KP++ EYI IL +FGDSEA AFSIHNLL+ G +YGL AGSW+GPYAMCR+W+TL RT RE
Sbjct: 192 KPYNPEYIGILHMFGDSEACAFSIHNLLQAGNSYGLAAGSWVGPYAMCRAWQTLVRTNRE 251

Query: 162 KSD----KQSSSMIVYVVSGDENGERGGAPVVCVEDVAKLCSESCEGQVVSKPILLLV 1
           + +     +S  M +YVVSGDE+GERGGAPVVC++  A+LC +  +GQ    PILLLV
Sbjct: 252 QHEVVDGNESFPMALYVVSGDEDGERGGAPVVCIDVAAQLCCDFNKGQSTWSPILLLV 309


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