BLASTX nr result
ID: Cimicifuga21_contig00016191
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00016191
(2469 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003549617.1| PREDICTED: uncharacterized protein LOC100781... 450 e-123
ref|XP_002511381.1| U3 small nucleolar ribonucleoprotein protein... 401 e-109
ref|XP_003634246.1| PREDICTED: uncharacterized protein LOC100241... 393 e-106
ref|XP_002321609.1| predicted protein [Populus trichocarpa] gi|2... 392 e-106
ref|XP_003578967.1| PREDICTED: U3 small nucleolar ribonucleoprot... 380 e-102
>ref|XP_003549617.1| PREDICTED: uncharacterized protein LOC100781093 [Glycine max]
Length = 516
Score = 450 bits (1157), Expect = e-123
Identities = 259/512 (50%), Positives = 319/512 (62%), Gaps = 2/512 (0%)
Frame = -3
Query: 2467 RTASQFLFSSLTPFCPKSYLDTLLVQDFDAEQIWQQIDLQTEPLISNLRRDVKRFEKNPE 2288
RTASQ+LFSSL PF PKS LD LLV FDAEQIWQQIDLQT+PL+S +RR VK+ +NPE
Sbjct: 36 RTASQYLFSSLKPFSPKSPLDQLLVDGFDAEQIWQQIDLQTQPLLSTIRRRVKQLVENPE 95
Query: 2287 VILKLFGGEIVKKVEDKQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2108
EI + E Q
Sbjct: 96 --------EISQLKEKSQDEWEEESDGFDEELDEEEEEDEDDEVKEGEGEEEEEETEDEE 147
Query: 2107 XXXXXXXXXXXXXDRFLKMSELENYMQEDEAR-EYGGSNQKGSAGKDSXXXXXXXEIG-G 1934
D+F K+ EL Y++++E E G ++++G D + G G
Sbjct: 148 EEGEDNEEGGVIEDKFFKIDELTKYLEKEEDDFENGEADREGEEEDDEEESDEEGDFGIG 207
Query: 1933 FEDNRDGEDDVEKMGLARYEDFFGVKKQRVRRRGFKPQDRSKHNEEEDDGGFHNXXXXXX 1754
+D+ D +++ E + ARYEDFFG KK+R +R + S+++++EDD
Sbjct: 208 DDDDEDEDEEAEGIESARYEDFFGGKKERGSKRKAQVLQESEYSDDEDD----------- 256
Query: 1753 XXXXXXXXXDNQDGSEDDKQEDEDGFHNQTKESLSTHEKKLEKLRTKIEQMEKANLDPKK 1574
E DK QTK + S HEK+LEK+++KIE MEKAN+DPK
Sbjct: 257 --------------MEFDK---------QTKGTASAHEKQLEKIQSKIELMEKANIDPKT 293
Query: 1573 WTMQGEVTATKRPKNSALEVDLDFEHNVRPLPVITEEVTESLEELIKKRIVEGHFDDVQK 1394
WTMQGEVTA KRPKNSALEVDLDFEHNVRP PVITEEVT S+E++IKKRI+EGHF+DVQ+
Sbjct: 294 WTMQGEVTAAKRPKNSALEVDLDFEHNVRPAPVITEEVTASIEDIIKKRIIEGHFNDVQR 353
Query: 1393 APSLPSKAPKEIKELDENKSKKGLAEIYEDEYVQQTGLGTGPVSSSDELKKEAQLLFEKL 1214
P LPSKAP+E+KELD+NKSK+GLAE+YE EYVQ+T + P+S DE K EA +LF++L
Sbjct: 354 VPKLPSKAPREVKELDDNKSKQGLAELYEQEYVQKTDPTSAPLSFKDEQKNEASMLFKRL 413
Query: 1213 CLKLDALSHFHFKPKPIIEDMSIQTNVPALAMEEIAPVAVSDAAMLAPEEVFAGKGDIKE 1034
CLKLDALSHF+F PKP+IEDMSIQ NVPALAMEEIAPVAVSDAAMLAPEEVF GKGDIKE
Sbjct: 414 CLKLDALSHFNFAPKPVIEDMSIQANVPALAMEEIAPVAVSDAAMLAPEEVFDGKGDIKE 473
Query: 1033 EAELTQAEXXXXXXXXXXXXKVESSRRVEKKA 938
E ELT+AE K E+ +R KKA
Sbjct: 474 ETELTKAERKTRRANKKRKFKAEAVKRTNKKA 505
>ref|XP_002511381.1| U3 small nucleolar ribonucleoprotein protein mpp10, putative [Ricinus
communis] gi|223550496|gb|EEF51983.1| U3 small nucleolar
ribonucleoprotein protein mpp10, putative [Ricinus
communis]
Length = 533
Score = 401 bits (1030), Expect = e-109
Identities = 228/423 (53%), Positives = 274/423 (64%), Gaps = 11/423 (2%)
Frame = -3
Query: 2065 RFLKMSELENYMQEDEAREYGGSNQK---------GSAGKDSXXXXXXXEIGGFEDNR-- 1919
+FLK+ ELE Y++EDEAREYG + + K+ + ED++
Sbjct: 162 KFLKIKELEEYLEEDEAREYGLDSMNIKKKKQKIFNDSDKEEDDEDEEEDESDDEDDKLD 221
Query: 1918 DGEDDVEKMGLARYEDFFGVKKQRVRRRGFKPQDRSKHNEEEDDGGFHNXXXXXXXXXXX 1739
D ++D E++G ARYEDFFG KK + SK DDG
Sbjct: 222 DEDEDAEELGNARYEDFFGAKK----------KTDSKRKSNLDDGS-------------- 257
Query: 1738 XXXXDNQDGSEDDKQEDEDGFHNQTKESLSTHEKKLEKLRTKIEQMEKANLDPKKWTMQG 1559
D GSE +K+ D LSTH+K+ EKL+++IEQMEKANL+PK WTM+G
Sbjct: 258 ----DEDSGSEVEKEGD-----------LSTHQKQREKLKSEIEQMEKANLEPKTWTMRG 302
Query: 1558 EVTATKRPKNSALEVDLDFEHNVRPLPVITEEVTESLEELIKKRIVEGHFDDVQKAPSLP 1379
EVTA RPKNSALEVDLDFEHNVRP PVITEEVT SLE++IK RI EG FDD+QK PSLP
Sbjct: 303 EVTAADRPKNSALEVDLDFEHNVRPAPVITEEVTASLEDMIKSRIAEGRFDDIQKLPSLP 362
Query: 1378 SKAPKEIKELDENKSKKGLAEIYEDEYVQQTGLGTGPVSSSDELKKEAQLLFEKLCLKLD 1199
S AP+E+KE+DENKSKKGLAE+YE+EYVQ+T P+S SDE KKEA +LF+KLCLKLD
Sbjct: 363 STAPREVKEMDENKSKKGLAEVYEEEYVQKTNPAAAPISFSDEQKKEASILFKKLCLKLD 422
Query: 1198 ALSHFHFKPKPIIEDMSIQTNVPALAMEEIAPVAVSDAAMLAPEEVFAGKGDIKEEAELT 1019
ALSHFHF PKP+IEDMSIQ NVPALAMEEIAP+AVSDAAMLAPEEVF+GKGDIKEEAELT
Sbjct: 423 ALSHFHFAPKPVIEDMSIQVNVPALAMEEIAPMAVSDAAMLAPEEVFSGKGDIKEEAELT 482
Query: 1018 QAEXXXXXXXXXXXXKVESSRRVEKKAGHNT*CSITRSKLRNSVIRPEHATQILYSRVVG 839
QAE K E +R+ K+A NT P+H L S ++G
Sbjct: 483 QAERKRRRAKKKRKFKAEGVKRMAKRARDNT-------------TLPDHNDGNLSSALIG 529
Query: 838 LIF 830
+F
Sbjct: 530 GLF 532
Score = 82.4 bits (202), Expect = 5e-13
Identities = 42/81 (51%), Positives = 57/81 (70%), Gaps = 3/81 (3%)
Frame = -3
Query: 2467 RTASQFLFSSLTPFCPKSYLDTLLVQDFDAEQIWQQIDLQTEPLISNLRRDVKRFEKNPE 2288
R ASQ LFS L P PKS D LLV+ FDAEQIWQQIDL T+PL+S++R V+ EKNPE
Sbjct: 35 RAASQHLFSCLKPHAPKSPFDKLLVEGFDAEQIWQQIDLLTQPLLSSIRHQVRNLEKNPE 94
Query: 2287 ---VILKLFGGEIVKKVEDKQ 2234
++++ E+ ++ E+K+
Sbjct: 95 EIKLVIEKKESEVGEEGENKE 115
>ref|XP_003634246.1| PREDICTED: uncharacterized protein LOC100241507 [Vitis vinifera]
Length = 533
Score = 393 bits (1010), Expect = e-106
Identities = 224/393 (56%), Positives = 264/393 (67%), Gaps = 13/393 (3%)
Frame = -3
Query: 2065 RFLKMSELENYMQEDEAREYGGSNQKGSAG--KDSXXXXXXXEIGGFEDNRDGE------ 1910
RFLK+ LE Y++ +E REYG N+KG + KD E E+ D E
Sbjct: 163 RFLKIKGLEEYLEAEEDREYGLKNKKGGSDALKDGEDENEDEEEEEEEEEEDDELGAFDL 222
Query: 1909 DDVEKMGL-----ARYEDFFGVKKQRVRRRGFKPQDRSKHNEEEDDGGFHNXXXXXXXXX 1745
DD E G+ +YEDFFG K+ K +SK +
Sbjct: 223 DDGENEGMDELDDIKYEDFFGPKR--------KVSKKSKLTD------------------ 256
Query: 1744 XXXXXXDNQDGSEDDKQEDEDGFHNQTKESLSTHEKKLEKLRTKIEQMEKANLDPKKWTM 1565
+D D+QED+ N+ K LSTHEK+ E +R KIE+ME+ANL+ K WTM
Sbjct: 257 ------GLEDSDRSDEQEDDQATDNKNKV-LSTHEKERENVRAKIEEMERANLESKTWTM 309
Query: 1564 QGEVTATKRPKNSALEVDLDFEHNVRPLPVITEEVTESLEELIKKRIVEGHFDDVQKAPS 1385
QGEVTA KRPKNSALEVDLDFEHNVRP PVITEEVT SLE+LI+KRI+EG FDDVQKAP
Sbjct: 310 QGEVTAAKRPKNSALEVDLDFEHNVRPPPVITEEVTASLEDLIQKRILEGRFDDVQKAPR 369
Query: 1384 LPSKAPKEIKELDENKSKKGLAEIYEDEYVQQTGLGTGPVSSSDELKKEAQLLFEKLCLK 1205
LPSKAPKE+KE+DENKSKKGLAEIYE+E+VQ+T L + P+S SDE +KEA +LF+KLCLK
Sbjct: 370 LPSKAPKEVKEMDENKSKKGLAEIYEEEFVQKTNLDSAPLSFSDEQRKEASMLFKKLCLK 429
Query: 1204 LDALSHFHFKPKPIIEDMSIQTNVPALAMEEIAPVAVSDAAMLAPEEVFAGKGDIKEEAE 1025
LDALSHFHF PKP+I+DMSIQTNVPALAMEEIAP+AVSDAAMLAPEEVF GKGDIKEEAE
Sbjct: 430 LDALSHFHFTPKPVIDDMSIQTNVPALAMEEIAPLAVSDAAMLAPEEVFEGKGDIKEEAE 489
Query: 1024 LTQAEXXXXXXXXXXXXKVESSRRVEKKAGHNT 926
LTQAE K +++R KKA T
Sbjct: 490 LTQAERKRRRANKKRKFKANTTKRAAKKAQDGT 522
Score = 106 bits (264), Expect = 3e-20
Identities = 51/79 (64%), Positives = 63/79 (79%)
Frame = -3
Query: 2467 RTASQFLFSSLTPFCPKSYLDTLLVQDFDAEQIWQQIDLQTEPLISNLRRDVKRFEKNPE 2288
R ASQ LF+SL PF PKS D LLV FDAEQIWQQID+Q++P+IS+LRR + RFEKNPE
Sbjct: 27 RAASQHLFASLKPFAPKSPFDRLLVDGFDAEQIWQQIDIQSQPIISSLRRQINRFEKNPE 86
Query: 2287 VILKLFGGEIVKKVEDKQR 2231
I K+FG + V++VE+K R
Sbjct: 87 EISKIFGRKKVRRVEEKVR 105
>ref|XP_002321609.1| predicted protein [Populus trichocarpa] gi|222868605|gb|EEF05736.1|
predicted protein [Populus trichocarpa]
Length = 554
Score = 392 bits (1006), Expect = e-106
Identities = 216/404 (53%), Positives = 274/404 (67%), Gaps = 24/404 (5%)
Frame = -3
Query: 2065 RFLKMSELENYMQEDEAREYGGSNQKGSAGK------DSXXXXXXXEIGGFEDNRDGEDD 1904
+FLK+ ELE++++E++A+EYG +K + K + + G E+ + EDD
Sbjct: 167 KFLKIKELEDFLEEEDAKEYGLDTRKNNKKKNLSDEEEDEEDEEDDDDEGEEEEDEDEDD 226
Query: 1903 VEK----MGL--------------ARYEDFFGVKKQRVRRRGFKPQDRSKHNEEEDDGGF 1778
+K +G+ ARYEDFFG KK+++ ++ K
Sbjct: 227 EDKEDDELGVFGNGDDEDEDASKRARYEDFFGGKKRKILKKKTK---------------- 270
Query: 1777 HNXXXXXXXXXXXXXXXDNQDGSEDDKQEDEDGFHNQTKESLSTHEKKLEKLRTKIEQME 1598
+D S DD+ +DE N+ K LSTHEK+L+KL+++IEQME
Sbjct: 271 -------------------EDSSSDDELDDEA--LNERKGRLSTHEKQLQKLQSEIEQME 309
Query: 1597 KANLDPKKWTMQGEVTATKRPKNSALEVDLDFEHNVRPLPVITEEVTESLEELIKKRIVE 1418
K+NL+PK WTMQGEVTA RPKNSALEVDLDFEHN+RP PVITEEVT +LE++IK RI+E
Sbjct: 310 KSNLEPKTWTMQGEVTAASRPKNSALEVDLDFEHNMRPAPVITEEVTATLEDMIKSRIIE 369
Query: 1417 GHFDDVQKAPSLPSKAPKEIKELDENKSKKGLAEIYEDEYVQQTGLGTGPVSSSDELKKE 1238
G FDD++KAPSL SKAP+E+KELDENKSKKGLA++YE+EYVQ+T P+S SDE KKE
Sbjct: 370 GRFDDIRKAPSLHSKAPRELKELDENKSKKGLADVYEEEYVQKTNPAAAPLSFSDEQKKE 429
Query: 1237 AQLLFEKLCLKLDALSHFHFKPKPIIEDMSIQTNVPALAMEEIAPVAVSDAAMLAPEEVF 1058
A +LF+KLCLKLDALSHFHF PKP+IEDMSIQ NVPALAMEEIAP+AVSDAAMLAPEE+F
Sbjct: 430 ASVLFKKLCLKLDALSHFHFAPKPVIEDMSIQANVPALAMEEIAPMAVSDAAMLAPEEIF 489
Query: 1057 AGKGDIKEEAELTQAEXXXXXXXXXXXXKVESSRRVEKKAGHNT 926
+GKG+IKEEAELT+AE K ES +R+ KKA NT
Sbjct: 490 SGKGNIKEEAELTKAERKRRRANKKRKFKAESVKRMPKKAQENT 533
Score = 85.1 bits (209), Expect = 8e-14
Identities = 46/82 (56%), Positives = 59/82 (71%), Gaps = 4/82 (4%)
Frame = -3
Query: 2467 RTASQFLFSSLTPFCPKSYLDTLLVQDFDAEQIWQQIDLQTEPLISNLRRDVKRFEKNPE 2288
RTA + LFSS+ P PKS D LL+ DAEQIWQQIDLQ++PL+S+LRR V F+KNPE
Sbjct: 38 RTACKHLFSSINPHVPKSPFDQLLIDGCDAEQIWQQIDLQSQPLLSSLRRQVLHFQKNPE 97
Query: 2287 VILKLFGGEIV----KKVEDKQ 2234
I K+ G +++ K VEDK+
Sbjct: 98 EI-KVNGDKVLQGKKKGVEDKE 118
>ref|XP_003578967.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein mpp10-like
isoform 1 [Brachypodium distachyon]
Length = 563
Score = 380 bits (975), Expect = e-102
Identities = 210/374 (56%), Positives = 253/374 (67%), Gaps = 22/374 (5%)
Frame = -3
Query: 2065 RFLKMSELENYMQEDEAREYGGSNQKGSAGK---------------------DSXXXXXX 1949
+FLK++ELE ++++ E EYGGS+++G K D
Sbjct: 179 KFLKINELEKFLEQGEEAEYGGSSKEGEKKKKKKAGVNWMEDESDEDMDEDGDEDEDDDD 238
Query: 1948 XEIGGFEDNRDGEDDVEKMGLARYEDFF-GVKKQRVRRRGFKPQDRSKHNEEEDDGGFHN 1772
++ E + D ED + G RYEDFF G KQ+V++R + +E + H
Sbjct: 239 LDLEDIEYDDDEEDGGKSGGDIRYEDFFEGKTKQQVKKRNGSTKKVQFKDELHEVKVDHT 298
Query: 1771 XXXXXXXXXXXXXXXDNQDGSEDDKQEDEDGFHNQTKESLSTHEKKLEKLRTKIEQMEKA 1592
N DG+ EDE G LSTHEK+ K+ KIEQMEKA
Sbjct: 299 E---------------NDDGNVGPALEDEQG--------LSTHEKERLKMHAKIEQMEKA 335
Query: 1591 NLDPKKWTMQGEVTATKRPKNSALEVDLDFEHNVRPLPVITEEVTESLEELIKKRIVEGH 1412
+L+P WTM+GEVTA+ RP+NSALEVDLDFEHNVRP PVITEEVT SLEE+IKKRI EGH
Sbjct: 336 SLEPSVWTMKGEVTASSRPRNSALEVDLDFEHNVRPAPVITEEVTASLEEMIKKRIAEGH 395
Query: 1411 FDDVQKAPSLPSKAPKEIKELDENKSKKGLAEIYEDEYVQQTGLGTGPVSSSDELKKEAQ 1232
FDDV+K +LPSKAPKE KE+DENKSKKGLAE+YE++YV++ GL P+S SDELKKEA
Sbjct: 396 FDDVEKPSTLPSKAPKEQKEMDENKSKKGLAELYEEDYVKEAGLAPAPLSISDELKKEAN 455
Query: 1231 LLFEKLCLKLDALSHFHFKPKPIIEDMSIQTNVPALAMEEIAPVAVSDAAMLAPEEVFAG 1052
LF+++CLKLDALSHFHF PKP+IEDMSIQ NVPALAMEE+APVAVSDAAMLAPEEVF G
Sbjct: 456 TLFKRICLKLDALSHFHFAPKPVIEDMSIQANVPALAMEEVAPVAVSDAAMLAPEEVFEG 515
Query: 1051 KGDIKEEAELTQAE 1010
KGDIKEEAELTQAE
Sbjct: 516 KGDIKEEAELTQAE 529