BLASTX nr result

ID: Cimicifuga21_contig00016180 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016180
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA51786.1| TPA: hypothetical protein ZEAMMB73_750935 [Zea m...    73   3e-11
ref|XP_002463774.1| hypothetical protein SORBIDRAFT_01g005940 [S...    70   1e-10
ref|XP_003558095.1| PREDICTED: uncharacterized protein LOC100838...    67   1e-09
dbj|BAJ93454.1| predicted protein [Hordeum vulgare subsp. vulgare]     65   7e-09
gb|ABR17577.1| unknown [Picea sitchensis]                              64   1e-08

>tpg|DAA51786.1| TPA: hypothetical protein ZEAMMB73_750935 [Zea mays]
          Length = 369

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
 Frame = -1

Query: 338 EGDNVDEDFLSLIAAAETQALDHKRRKTIHGGTKPEEQARSNTSSEGAYTAALKGSKSLA 159
           +GD+ DE FL  + AAE  ALD  +R+ +   +     + S  ++EG Y AALKGS S  
Sbjct: 5   DGDD-DEAFLIALDAAEAAALDSSKRRRLSTTSSSPTPSTSPAATEGPYLAALKGSHSST 63

Query: 158 WQQQSSATSLKTRSNXXXXXXXSDTGGD-TCFKCGKSGHWARDCVSS 21
           W+QQ        +           TG   +CFKCG  GHWAR+C  S
Sbjct: 64  WKQQLQDLGYAHKRPDGSKSLAPGTGASGSCFKCGDPGHWARECPQS 110


>ref|XP_002463774.1| hypothetical protein SORBIDRAFT_01g005940 [Sorghum bicolor]
           gi|241917628|gb|EER90772.1| hypothetical protein
           SORBIDRAFT_01g005940 [Sorghum bicolor]
          Length = 366

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 42/106 (39%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
 Frame = -1

Query: 323 DEDFLSLIAAAETQALDHKRRKTIHGGTKPEEQARSNTSSEGAYTAALKGSKSLAWQQQS 144
           DE FL  + AAE  ALD  +R+ +   +     + S  + EG Y AALKGS S  W+QQ 
Sbjct: 9   DEAFLLALDAAEAAALDSSKRRRLSTTSSSSTPSTSPATPEGPYLAALKGSHSSTWKQQM 68

Query: 143 SATSLKTRSNXXXXXXXSDTGG-----DTCFKCGKSGHWARDCVSS 21
              + K             TGG       CFKCG  GHWARDC  S
Sbjct: 69  HGYAHK--QPHGSKPLAPGTGGAQVASGACFKCGDPGHWARDCPQS 112


>ref|XP_003558095.1| PREDICTED: uncharacterized protein LOC100838417 [Brachypodium
           distachyon]
          Length = 366

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 41/113 (36%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
 Frame = -1

Query: 332 DNVDEDFLSLIAAAETQALDHKRRKTIHGGTKPEEQARSNTSSEGAYTAALKGSKSLAWQ 153
           D+ DE FL  + A E  A+     K     T P     S  +SEG+Y +ALKGS S AW+
Sbjct: 6   DDDDEAFLLAVEATEAAAIASSNPKRPRLSTSPSP---SPAASEGSYLSALKGSHSTAWK 62

Query: 152 QQSSATSLKTRSNXXXXXXXSDTGGDT---------CFKCGKSGHWARDCVSS 21
           QQ  A +   +            GG T         CFKCG + HWAR+C  S
Sbjct: 63  QQQEALAYAHKRPGGSKAPAITPGGGTGGAPVAKGACFKCGDTSHWARECPQS 115


>dbj|BAJ93454.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 371

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 42/111 (37%), Positives = 49/111 (44%), Gaps = 10/111 (9%)
 Frame = -1

Query: 323 DEDFLSLIAAAETQALDHKRRKTIHGGTKPEEQARSNTSSEGAYTAALKGSKSLAW-QQQ 147
           DE FL    AAE  A+   +R  +     P   A     SEGAY +ALKGS S AW QQQ
Sbjct: 9   DEAFLLAAEAAEAAAISSSKRPRLSTSPSPTPGA-----SEGAYLSALKGSHSAAWKQQQ 63

Query: 146 SSATSLKTRSNXXXXXXXSDTGG---------DTCFKCGKSGHWARDCVSS 21
            + T    R            GG           CFKCG + HWAR+C  S
Sbjct: 64  ETLTLAHRRPGGSKVPGVFPAGGVAGGVQITKGACFKCGDTSHWARECPQS 114


>gb|ABR17577.1| unknown [Picea sitchensis]
          Length = 374

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 46/125 (36%), Positives = 61/125 (48%), Gaps = 18/125 (14%)
 Frame = -1

Query: 341 MEGDNV--DEDFLSLIAAAETQALDHKRRKTIHGGT-------KPEEQARSN-TSSEGAY 192
           M+ D++  D++FLSL+ A E   +  KRRK   GG+        P      N    EG Y
Sbjct: 1   MDDDDLVEDDEFLSLVDAVEADIM--KRRKMNDGGSYTSPSNSNPNPNPNPNPVGEEGPY 58

Query: 191 TAALKGSKSLAWQQQSSATSLKTRSNXXXXXXXSDTG--------GDTCFKCGKSGHWAR 36
            AAL+GS S  WQ  ++    KT +N       S  G        G  CFKC + GHWA+
Sbjct: 59  LAALRGSNSHLWQTMNNP---KTNTNKRPAETASYGGVGGGGVGVGGVCFKCQQPGHWAK 115

Query: 35  DCVSS 21
           DCV+S
Sbjct: 116 DCVAS 120


Top