BLASTX nr result

ID: Cimicifuga21_contig00016175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016175
         (1248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282613.1| PREDICTED: ribosomal protein L11 methyltrans...   330   4e-88
ref|XP_003526025.1| PREDICTED: ribosomal protein L11 methyltrans...   320   6e-85
gb|AFK42043.1| unknown [Lotus japonicus]                              291   3e-76
ref|XP_002317484.1| predicted protein [Populus trichocarpa] gi|2...   290   7e-76
ref|XP_004162937.1| PREDICTED: ribosomal protein L11 methyltrans...   289   1e-75

>ref|XP_002282613.1| PREDICTED: ribosomal protein L11 methyltransferase [Vitis vinifera]
            gi|302142971|emb|CBI20266.3| unnamed protein product
            [Vitis vinifera]
          Length = 367

 Score =  330 bits (847), Expect = 4e-88
 Identities = 177/289 (61%), Positives = 205/289 (70%), Gaps = 2/289 (0%)
 Frame = -2

Query: 1247 DMLSEALLCFGASSTSIDEPDKSENNDEICINSIFMECQDVNTCISHAADSIGLKVMPSY 1068
            DMLSEALLCFGASSTS+DE    E ND+ICI+SIF + QDV+ CISHAADS+GLK +PSY
Sbjct: 75   DMLSEALLCFGASSTSMDEQGSDEGNDKICIDSIFSDRQDVDVCISHAADSVGLKELPSY 134

Query: 1067 XXXXXXXXXXXXKTQESFHPVEVTKGFWIVPEWRTPPDLQATNIILNPGLAFGTGDHPTT 888
                        KTQESF PVEVT+G WIVPEWRTPPD  ATNIILNPG AFGTG+HPTT
Sbjct: 135  EVRVGEQYDWIKKTQESFCPVEVTEGLWIVPEWRTPPDAHATNIILNPGFAFGTGEHPTT 194

Query: 887  KXXXXXXXXLIKGGEVLLDYGTGSGILGIAAIKLGASLSVGIDIDPKSITSAWQNAALNN 708
            K        LIKGGE  LDYGTGSGIL IAA+K GA+ SVGID+DP++IT+A QNAALN 
Sbjct: 195  KLCLLLLHGLIKGGERFLDYGTGSGILAIAALKFGAASSVGIDVDPQAITAATQNAALNK 254

Query: 707  IEPEKMQVYLVPSKTTPSADQIPCRDEAQSMGIL--CNKYDIVIANILLNPLLELADQII 534
            I P KMQ+ LVP        ++       SMG+      +DIVIANILLNPLL+LAD I+
Sbjct: 255  ISPNKMQLTLVP--PDGRTHEVVEGQSPNSMGVTTESESFDIVIANILLNPLLDLADDIV 312

Query: 533  NYAKPXXXXXXXXILSEQLLKIEERYAQYLEGISVTEMDGWVCVSGRKR 387
            ++AKP        I+SEQ+  I ERY+  LE ISVTE+D W CV G KR
Sbjct: 313  SHAKPGAVVAVSGIISEQVPYIMERYSPLLESISVTEIDDWACVCGTKR 361


>ref|XP_003526025.1| PREDICTED: ribosomal protein L11 methyltransferase-like [Glycine max]
          Length = 381

 Score =  320 bits (819), Expect = 6e-85
 Identities = 164/287 (57%), Positives = 209/287 (72%)
 Frame = -2

Query: 1247 DMLSEALLCFGASSTSIDEPDKSENNDEICINSIFMECQDVNTCISHAADSIGLKVMPSY 1068
            D+L+EALLCFGASS S+D+ D S++ DEICI+SIF E +D+N  ISHAADSIGLK +P Y
Sbjct: 96   DVLAEALLCFGASSVSMDQDDVSQSTDEICISSIFHEVEDINVSISHAADSIGLKEIPRY 155

Query: 1067 XXXXXXXXXXXXKTQESFHPVEVTKGFWIVPEWRTPPDLQATNIILNPGLAFGTGDHPTT 888
                        ++QES HPV+VT+G W+VP+W TPPD+QATNII+NPGLAFGTG+H TT
Sbjct: 156  EVKIDDEEDWMKRSQESLHPVQVTEGLWVVPKWCTPPDVQATNIIVNPGLAFGTGEHATT 215

Query: 887  KXXXXXXXXLIKGGEVLLDYGTGSGILGIAAIKLGASLSVGIDIDPKSITSAWQNAALNN 708
            K         IKGGE +LDYGTG+GIL IAA+K GA+ +VG+D+D ++I SA QNA LNN
Sbjct: 216  KLCLLLLHGCIKGGEHILDYGTGTGILAIAALKFGAAFAVGVDVDSEAIASASQNAYLNN 275

Query: 707  IEPEKMQVYLVPSKTTPSADQIPCRDEAQSMGILCNKYDIVIANILLNPLLELADQIINY 528
            I  +KMQ++LV SKT+ S+       E         K+D+V+ANILLNPLL+LADQII++
Sbjct: 276  IGQDKMQLHLVASKTSSSSKNDLTFGE---------KFDVVVANILLNPLLDLADQIISH 326

Query: 527  AKPXXXXXXXXILSEQLLKIEERYAQYLEGISVTEMDGWVCVSGRKR 387
            AKP        ILSEQ+  I ERY+ +LEGI V++MD W CVSGRK+
Sbjct: 327  AKPGAVVGLSGILSEQVQYIIERYSPFLEGIEVSKMDDWACVSGRKK 373


>gb|AFK42043.1| unknown [Lotus japonicus]
          Length = 397

 Score =  291 bits (744), Expect = 3e-76
 Identities = 161/296 (54%), Positives = 200/296 (67%), Gaps = 9/296 (3%)
 Frame = -2

Query: 1247 DMLSEALLCFGASSTSIDEPDKSENNDEICINSIFMECQDVNTCISHAADSIGLKVMPSY 1068
            D+L+EALLCFGA+S SID+ D  +  DEICI+SIF E +D+N  ISHAADSIGLK +P Y
Sbjct: 103  DVLAEALLCFGATSVSIDQDDVCQRRDEICISSIFSEGEDINVGISHAADSIGLKEIPRY 162

Query: 1067 XXXXXXXXXXXXKTQESFHPVEVTKGFWIVPEWRTP--PDLQATNIILNPGLAFGTGDHP 894
                          QESF PVEVTK  W+VP+W  P  PD +ATNIIL+PGLAFGTG+H 
Sbjct: 163  EVKVNEENWMKR-AQESFCPVEVTKDLWVVPKWSAPRPPDDKATNIILDPGLAFGTGEHA 221

Query: 893  TTKXXXXXXXXLIKGGEVLLDYGTGSGILGIAAIKLGASLSVGIDIDPKSITSAWQNAAL 714
            TTK         +KGGE +LDYGTG+GIL IAA+K GA+ +VG+DID  +I SA +NAAL
Sbjct: 222  TTKLCLLLLRGCVKGGEYILDYGTGTGILAIAALKFGAAFAVGVDIDSDAIASASENAAL 281

Query: 713  NNIEPEKMQVYLVPSKTTPS--ADQIPCRDEAQSMGILCN-----KYDIVIANILLNPLL 555
            NNIEP+KMQ+ L+ S  + S  AD      E +    +       KYD VIAN+LLNPLL
Sbjct: 282  NNIEPDKMQLLLIASDASSSFKADSKSGVVEGERTCEIQTVTGQYKYDAVIANMLLNPLL 341

Query: 554  ELADQIINYAKPXXXXXXXXILSEQLLKIEERYAQYLEGISVTEMDGWVCVSGRKR 387
            +LADQI++ AKP        ILSEQ+  I  RY+ +LEGI V+ MD W CVSG+K+
Sbjct: 342  DLADQIVSCAKPGAVIGLSGILSEQVQYIIRRYSPFLEGIEVSHMDEWACVSGKKK 397


>ref|XP_002317484.1| predicted protein [Populus trichocarpa] gi|222860549|gb|EEE98096.1|
            predicted protein [Populus trichocarpa]
          Length = 322

 Score =  290 bits (741), Expect = 7e-76
 Identities = 154/271 (56%), Positives = 186/271 (68%), Gaps = 6/271 (2%)
 Frame = -2

Query: 1178 ENNDEICINSIFMECQDVNTCISHAADSIGLKVMPSYXXXXXXXXXXXXKTQESFHPVEV 999
            E  D +CI+SIF E +DV+ C+S AA+SIGLK  P Y            KTQESFHPVEV
Sbjct: 11   EPYDNVCIDSIFPEFEDVDMCLSQAANSIGLKETPPYEVNLGDQYEWVRKTQESFHPVEV 70

Query: 998  TKGFWIVPEWRTPPDLQATNIILNPGLAFGTGDHPTTKXXXXXXXXLIKGGEVLLDYGTG 819
            T+G WIVPEWR+PPD+QATNIILNPGLAFGTG+HPTTK        LIKG E+ LDYGTG
Sbjct: 71   TEGLWIVPEWRSPPDVQATNIILNPGLAFGTGEHPTTKLCLLLLKKLIKGEELFLDYGTG 130

Query: 818  SGILGIAAIKLGASLSVGIDIDPKSITSAWQNAALNNIEPEKMQVYLVPSKTTPS----A 651
            SG+L IAA+K GA+LSVG DIDP++I SA  NA LN+I PE M+++LVP KT  S     
Sbjct: 131  SGVLAIAALKFGAALSVGFDIDPQAIMSARHNATLNSIGPETMELHLVPGKTCSSLDGRE 190

Query: 650  DQIPCRDEAQSMGIL--CNKYDIVIANILLNPLLELADQIINYAKPXXXXXXXXILSEQL 477
            D++         G++    KYD+VIANILLNPLL+LAD I++YAKP        I+SEQ 
Sbjct: 191  DEMVKEQSCCGTGVISGTEKYDVVIANILLNPLLDLADHIVSYAKPRAVVGISGIISEQC 250

Query: 476  LKIEERYAQYLEGISVTEMDGWVCVSGRKRS 384
              I +RY+  LE ISV+EMDGW CV     S
Sbjct: 251  SCIVDRYSMLLEDISVSEMDGWACVRWNSES 281


>ref|XP_004162937.1| PREDICTED: ribosomal protein L11 methyltransferase-like [Cucumis
            sativus]
          Length = 390

 Score =  289 bits (739), Expect = 1e-75
 Identities = 164/308 (53%), Positives = 205/308 (66%), Gaps = 21/308 (6%)
 Frame = -2

Query: 1247 DMLSEALLCFGASSTSIDE--------------------PDKSENNDE-ICINSIFMECQ 1131
            D LSEALL FGASSTS+DE                    P  +EN+   I +++IF + Q
Sbjct: 84   DSLSEALLSFGASSTSVDEDCACGSSQEAQEYLSLPLSCPCDAENDGVLIYVDTIFPDGQ 143

Query: 1130 DVNTCISHAADSIGLKVMPSYXXXXXXXXXXXXKTQESFHPVEVTKGFWIVPEWRTPPDL 951
            DV+ CIS+AADS+GLK  P Y            K+QESF PV+V +G WIVPEW TP D+
Sbjct: 144  DVSKCISYAADSVGLKESPFYEVTIDDQYDWLKKSQESFKPVKVMEGLWIVPEWTTPSDV 203

Query: 950  QATNIILNPGLAFGTGDHPTTKXXXXXXXXLIKGGEVLLDYGTGSGILGIAAIKLGASLS 771
             ATNIIL+PGLAFG G+HPTTK        L+KGGE  LDYGTG+G+L IA++K GA+ S
Sbjct: 204  HATNIILHPGLAFGMGEHPTTKLCLQLLHSLVKGGEYFLDYGTGTGVLAIASLKFGAAFS 263

Query: 770  VGIDIDPKSITSAWQNAALNNIEPEKMQVYLVPSKTTPSADQIPCRDEAQSMGILCNKYD 591
            VGID+DP++I S  +NAALNNIEPEK+Q++LVPS     A+   C  EA   G     +D
Sbjct: 264  VGIDVDPQAIESGQKNAALNNIEPEKLQLHLVPSDL---AEYKNC--EAYISG--KENFD 316

Query: 590  IVIANILLNPLLELADQIINYAKPXXXXXXXXILSEQLLKIEERYAQYLEGISVTEMDGW 411
            IVIANIL NPLL+LAD +++YAKP        ILSEQ+  I ERY+Q+LEGISV+ MD W
Sbjct: 317  IVIANILQNPLLDLADYVVSYAKPEAVVALSGILSEQVPAIIERYSQFLEGISVSTMDDW 376

Query: 410  VCVSGRKR 387
             CVSG+K+
Sbjct: 377  ACVSGKKK 384


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