BLASTX nr result

ID: Cimicifuga21_contig00016171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016171
         (782 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283744.1| PREDICTED: mitochondrial inner membrane prot...   239   5e-61
gb|AFK47893.1| unknown [Medicago truncatula]                          232   6e-59
ref|XP_004137247.1| PREDICTED: mitochondrial inner membrane prot...   232   8e-59
ref|XP_002275543.1| PREDICTED: mitochondrial inner membrane prot...   231   1e-58
ref|XP_002519717.1| mitochondrial inner membrane protease subuni...   228   1e-57

>ref|XP_002283744.1| PREDICTED: mitochondrial inner membrane protease subunit 1 [Vitis
           vinifera] gi|302142795|emb|CBI20090.3| unnamed protein
           product [Vitis vinifera]
          Length = 167

 Score =  239 bits (610), Expect = 5e-61
 Identities = 108/162 (66%), Positives = 136/162 (83%)
 Frame = -2

Query: 721 LRNLLQWKTIAKEALDRTVIVAKFLCLLHVTDKYLCSSVLVYGPSMYPTLNHTGDVVLVE 542
           L  L QW+T+A+EA +RT I+AKFLC+LHVT+ Y+C+  LVYGPSM PT N TGDV+LVE
Sbjct: 4   LSKLSQWRTLAREAAERTAILAKFLCILHVTNTYICTPTLVYGPSMLPTFNLTGDVLLVE 63

Query: 541 KISTRLGKVSQGDIVLVQSPLNPNRSVTKRVLGMEGDQVTFAVDPANSDETETVVVPKGH 362
            ++ R+GKV  GD+VLV+SP NP ++V+KR+LGMEGD+VTF +DP NS+  ++VV+PKGH
Sbjct: 64  NLTVRMGKVRPGDVVLVRSPENPRKTVSKRILGMEGDRVTFMIDPKNSNRCQSVVIPKGH 123

Query: 361 VWIQGDNVYASRDSRYFGPVPYRLLQGKVFWRVWPSIGFGSL 236
           VWIQGDN+YAS DSR FGPVPY L+QGKVF+RVWP  GFGSL
Sbjct: 124 VWIQGDNIYASHDSRNFGPVPYGLIQGKVFFRVWPLNGFGSL 165


>gb|AFK47893.1| unknown [Medicago truncatula]
          Length = 166

 Score =  232 bits (592), Expect = 6e-59
 Identities = 109/161 (67%), Positives = 131/161 (81%)
 Frame = -2

Query: 712 LLQWKTIAKEALDRTVIVAKFLCLLHVTDKYLCSSVLVYGPSMYPTLNHTGDVVLVEKIS 533
           + QWK++AKEALDR+ I+AKFLC LH T  YLCS    YGPSM PTLN  GDVVLVE +S
Sbjct: 7   IAQWKSVAKEALDRSAIIAKFLCYLHFTGNYLCSPTHAYGPSMLPTLNIAGDVVLVEHVS 66

Query: 532 TRLGKVSQGDIVLVQSPLNPNRSVTKRVLGMEGDQVTFAVDPANSDETETVVVPKGHVWI 353
            R+GKV  GD+VLV+SPLNPNR++TKRV+ MEGD VT+  DP NS+++   VVPKGHVWI
Sbjct: 67  PRIGKVGHGDLVLVKSPLNPNRNLTKRVVAMEGDTVTY-FDPLNSEDSRIAVVPKGHVWI 125

Query: 352 QGDNVYASRDSRYFGPVPYRLLQGKVFWRVWPSIGFGSLNH 230
           QGDNVYASRDSR+FGPVPY L++GKVF+RVWP   FG L++
Sbjct: 126 QGDNVYASRDSRHFGPVPYGLIRGKVFFRVWPPSSFGRLDN 166


>ref|XP_004137247.1| PREDICTED: mitochondrial inner membrane protease subunit 1-like
           [Cucumis sativus] gi|449483132|ref|XP_004156501.1|
           PREDICTED: mitochondrial inner membrane protease subunit
           1-like [Cucumis sativus]
          Length = 161

 Score =  232 bits (591), Expect = 8e-59
 Identities = 105/158 (66%), Positives = 132/158 (83%)
 Frame = -2

Query: 706 QWKTIAKEALDRTVIVAKFLCLLHVTDKYLCSSVLVYGPSMYPTLNHTGDVVLVEKISTR 527
           QW+++ KEA+DRTVI+AKFLCLLHVT+ Y+CS  LVYGPSM PTLN TGDV+L E +S R
Sbjct: 3   QWRSVVKEAIDRTVIIAKFLCLLHVTNNYICSPTLVYGPSMLPTLNLTGDVLLAEHVSHR 62

Query: 526 LGKVSQGDIVLVQSPLNPNRSVTKRVLGMEGDQVTFAVDPANSDETETVVVPKGHVWIQG 347
           +G+V  GD+VLV+SP NP + +TKR++G+EGD+V F  DPANS++ ++ VVPKGHVWIQG
Sbjct: 63  VGRVGPGDVVLVRSPRNPRKMLTKRIVGVEGDKVNFYPDPANSNQYQSAVVPKGHVWIQG 122

Query: 346 DNVYASRDSRYFGPVPYRLLQGKVFWRVWPSIGFGSLN 233
           DNVYASRDSR+FGPVPY L++GK F RVWP   FG L+
Sbjct: 123 DNVYASRDSRHFGPVPYGLIEGKAFLRVWPPDCFGRLD 160


>ref|XP_002275543.1| PREDICTED: mitochondrial inner membrane protease subunit 1-like
           isoform 1 [Vitis vinifera]
           gi|359483846|ref|XP_003633025.1| PREDICTED:
           mitochondrial inner membrane protease subunit 1-like
           isoform 2 [Vitis vinifera]
          Length = 169

 Score =  231 bits (589), Expect = 1e-58
 Identities = 107/166 (64%), Positives = 129/166 (77%)
 Frame = -2

Query: 727 MGLRNLLQWKTIAKEALDRTVIVAKFLCLLHVTDKYLCSSVLVYGPSMYPTLNHTGDVVL 548
           MG+ N+ QW  I KEALDR    AKFLCLLHV++ YLC+  L +GPSM PTLN +GD++L
Sbjct: 1   MGVSNVKQWSRIVKEALDRAFFTAKFLCLLHVSNTYLCTVALAHGPSMLPTLNLSGDLIL 60

Query: 547 VEKISTRLGKVSQGDIVLVQSPLNPNRSVTKRVLGMEGDQVTFAVDPANSDETETVVVPK 368
            +++S R GKV  GDIVLV+SP NP + +TKRV+GM GD+VTF+VDP +S   ETVVVP+
Sbjct: 61  ADRLSVRFGKVGPGDIVLVRSPQNPRKIITKRVVGMGGDRVTFSVDPKDSRRCETVVVPE 120

Query: 367 GHVWIQGDNVYASRDSRYFGPVPYRLLQGKVFWRVWPSIGFGSLNH 230
           GHVWI GDN+YAS DSR FG VPY LLQGKVFWR+WP  GFG L H
Sbjct: 121 GHVWIAGDNIYASTDSRNFGAVPYGLLQGKVFWRIWPPQGFGLLRH 166


>ref|XP_002519717.1| mitochondrial inner membrane protease subunit, putative [Ricinus
           communis] gi|223541134|gb|EEF42690.1| mitochondrial
           inner membrane protease subunit, putative [Ricinus
           communis]
          Length = 176

 Score =  228 bits (581), Expect = 1e-57
 Identities = 106/154 (68%), Positives = 126/154 (81%)
 Frame = -2

Query: 727 MGLRNLLQWKTIAKEALDRTVIVAKFLCLLHVTDKYLCSSVLVYGPSMYPTLNHTGDVVL 548
           M +RNL QWK+ AKEAL+++++VAKFLC LHVT+ YLC++ L YGPSM PTLN TGD+VL
Sbjct: 1   MSIRNLAQWKSFAKEALNQSILVAKFLCFLHVTNTYLCTAALTYGPSMLPTLNLTGDLVL 60

Query: 547 VEKISTRLGKVSQGDIVLVQSPLNPNRSVTKRVLGMEGDQVTFAVDPANSDETETVVVPK 368
            E+IS R GKV  GDIVLV+SP+NP R VTKRV+G+EGD VT+ VDP NSD + TVVVPK
Sbjct: 61  AERISPRFGKVGPGDIVLVRSPVNPKRIVTKRVMGVEGDSVTYVVDPKNSDASNTVVVPK 120

Query: 367 GHVWIQGDNVYASRDSRYFGPVPYRLLQGKVFWR 266
           GH+WI+GDNVY S DSR FG VPY LL  KVFWR
Sbjct: 121 GHIWIEGDNVYDSNDSRKFGAVPYGLLHAKVFWR 154


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