BLASTX nr result

ID: Cimicifuga21_contig00016090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016090
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529195.1| DNA binding protein, putative [Ricinus commu...    80   2e-13
ref|XP_002331186.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
ref|XP_003529843.1| PREDICTED: uncharacterized protein LOC100810...    75   4e-12
ref|XP_003548371.1| PREDICTED: uncharacterized protein LOC100814...    74   2e-11
ref|XP_002304116.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11

>ref|XP_002529195.1| DNA binding protein, putative [Ricinus communis]
            gi|223531373|gb|EEF33209.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 1374

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 40/58 (68%), Positives = 48/58 (82%)
 Frame = +3

Query: 231  SPMSPRLSSGALPQLNAGNVGTGPPSPQLSSQTLGSVGSITSSSMELQGVNKSSSAGN 404
            +PMSP++SSGA+  ++AGN    P SPQLSSQTLGSVGSIT+S MELQGVNKS+S  N
Sbjct: 1316 TPMSPQISSGAIHAMSAGNPEACPASPQLSSQTLGSVGSITNSPMELQGVNKSNSVNN 1373


>ref|XP_002331186.1| predicted protein [Populus trichocarpa] gi|222873307|gb|EEF10438.1|
            predicted protein [Populus trichocarpa]
          Length = 1341

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/58 (67%), Positives = 47/58 (81%)
 Frame = +3

Query: 231  SPMSPRLSSGALPQLNAGNVGTGPPSPQLSSQTLGSVGSITSSSMELQGVNKSSSAGN 404
            +PMSP+LSSGA+  +++GN   GP SPQLSSQTLGSVGSIT+S MELQ VNK +S  N
Sbjct: 1283 TPMSPQLSSGAIHAISSGNPEAGPASPQLSSQTLGSVGSITNSPMELQAVNKRNSVSN 1340


>ref|XP_003529843.1| PREDICTED: uncharacterized protein LOC100810803 [Glycine max]
          Length = 1345

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 37/55 (67%), Positives = 46/55 (83%)
 Frame = +3

Query: 231  SPMSPRLSSGALPQLNAGNVGTGPPSPQLSSQTLGSVGSITSSSMELQGVNKSSS 395
            +PMSP++SSGA+  +NAGN    P SPQLSSQTLGSV SIT+S M++QGVNKS+S
Sbjct: 1288 TPMSPQMSSGAIHAMNAGNPEACPASPQLSSQTLGSVSSITNSPMDMQGVNKSNS 1342


>ref|XP_003548371.1| PREDICTED: uncharacterized protein LOC100814582 [Glycine max]
          Length = 1305

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 36/55 (65%), Positives = 46/55 (83%)
 Frame = +3

Query: 231  SPMSPRLSSGALPQLNAGNVGTGPPSPQLSSQTLGSVGSITSSSMELQGVNKSSS 395
            +PMSP++SSGA+  ++AGN    P SPQLSSQTLGSV SIT+S M++QGVNKS+S
Sbjct: 1248 TPMSPQMSSGAIHAMSAGNPEACPASPQLSSQTLGSVSSITNSPMDMQGVNKSNS 1302


>ref|XP_002304116.1| predicted protein [Populus trichocarpa] gi|222841548|gb|EEE79095.1|
            predicted protein [Populus trichocarpa]
          Length = 1396

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 38/58 (65%), Positives = 45/58 (77%)
 Frame = +3

Query: 231  SPMSPRLSSGALPQLNAGNVGTGPPSPQLSSQTLGSVGSITSSSMELQGVNKSSSAGN 404
            +PMSP+LSSGA+  ++AGN    P SPQLSSQTLGSVGS T+S MELQ VNKS+   N
Sbjct: 1338 TPMSPQLSSGAIHAISAGNPEGCPASPQLSSQTLGSVGSFTNSPMELQTVNKSNPVSN 1395


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