BLASTX nr result

ID: Cimicifuga21_contig00016012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016012
         (1327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282268.1| PREDICTED: uncharacterized protein LOC100265...   452   e-124
ref|XP_002530295.1| structural constituent of cell wall, putativ...   438   e-120
ref|XP_002313517.1| predicted protein [Populus trichocarpa] gi|2...   436   e-120
ref|NP_200860.1| late embryogenesis abundant protein-like protei...   431   e-118
gb|AFK33795.1| unknown [Lotus japonicus]                              421   e-115

>ref|XP_002282268.1| PREDICTED: uncharacterized protein LOC100265658 [Vitis vinifera]
            gi|297746242|emb|CBI16298.3| unnamed protein product
            [Vitis vinifera]
          Length = 368

 Score =  452 bits (1162), Expect = e-124
 Identities = 217/307 (70%), Positives = 246/307 (80%), Gaps = 4/307 (1%)
 Frame = +2

Query: 224  AYDAASTHYTWLPPNKGKQERAFCQARGQCFNKTLXXXXXXXXXXXXXXXXVKGCFIDCS 403
            A +AAST+YT L      QERAFC+ARG C+ KTL                 KGCFIDC 
Sbjct: 56   AEEAASTNYTMLSSTAKGQERAFCKARGACYFKTLVCPTECPQRKPKKNRKKKGCFIDCG 115

Query: 404  SKCETTCKFRLAKCDGYGSICYDPRFVGGDGVMFYFHGAKGGDFALVSDDDLHINAHFIG 583
            SKCE TCK+R AKC GYGS+CYDPRF+GGDGVMFYFHGAKGGDFA+VSDD+LHINAHFIG
Sbjct: 116  SKCEVTCKYRKAKCTGYGSLCYDPRFIGGDGVMFYFHGAKGGDFAIVSDDNLHINAHFIG 175

Query: 584  TRPEGRTRDYTWVQALSVMFDSHTLVIAAKKICHWDDKADALIVRWNGKTVELPTDGE-D 760
            TRP  RTRD+TWVQA SVMFD+HTLVIAA ++ HWDD  DALIVRW+G+TV +PTDGE +
Sbjct: 176  TRPATRTRDFTWVQAFSVMFDTHTLVIAADRVSHWDDDVDALIVRWDGETVTIPTDGEAE 235

Query: 761  WITTGGGREVVVERTDETNSIRVTVSGLLQMDVRVTPIGAEENRVHKYKLPSDDAFAHLE 940
            W    G REVVVERTD+TNS+RVTV GL++MDVRVTP+GA+ENRVH Y+LP+DDAFAHLE
Sbjct: 236  WRVDCGEREVVVERTDDTNSVRVTVGGLVEMDVRVTPVGADENRVHNYQLPADDAFAHLE 295

Query: 941  TQFKFSNLTDLVEGVLGKTYQPNYVSPVKIGVPMPMMGGEDKYHTSSLLSPLCGACRF-- 1114
            TQF F NLT+ VEGVLGKTY+P YVSPVK GVPMP+MGGEDKY T SL SPLC  CRF  
Sbjct: 296  TQFSFKNLTESVEGVLGKTYRPGYVSPVKRGVPMPVMGGEDKYRTPSLFSPLCKLCRFQP 355

Query: 1115 -MGLPSA 1132
             +GL SA
Sbjct: 356  QVGLTSA 362


>ref|XP_002530295.1| structural constituent of cell wall, putative [Ricinus communis]
            gi|223530193|gb|EEF32102.1| structural constituent of
            cell wall, putative [Ricinus communis]
          Length = 351

 Score =  438 bits (1126), Expect = e-120
 Identities = 211/342 (61%), Positives = 250/342 (73%), Gaps = 1/342 (0%)
 Frame = +2

Query: 92   MDRRQLYSLLAFLAVFISTAVPFVWXXXXXXXXXXXXXXXXXXXAYDAASTHYTWLPPNK 271
            MD+R+   LLAF  VF+      V                     YDAA THY  LP   
Sbjct: 1    MDKRKSCMLLAFFLVFVLMEANTV------QAQKKSNSSSIKKSPYDAAITHYYMLPTLP 54

Query: 272  GKQERAFCQARGQCFNKTLXXXXXXXXXXXXXXXXVKGCFIDCSSKCETTCKFRLAKCDG 451
               E+A+C ARG C NKTL                 KGCFIDCSSKCE TC++R   C+G
Sbjct: 55   TGNEQAYCLARGACQNKTLVCPDQCKERKPAQNKKQKGCFIDCSSKCEATCRWRRPNCNG 114

Query: 452  YGSICYDPRFVGGDGVMFYFHGAKGGDFALVSDDDLHINAHFIGTRPEGRTRDYTWVQAL 631
            YGS+CYDPRFVGGDGVMFYFHG KGG+FA+VSDD+L INAH IGTRP+GRTRD+TWVQAL
Sbjct: 115  YGSLCYDPRFVGGDGVMFYFHGEKGGNFAIVSDDNLQINAHLIGTRPQGRTRDFTWVQAL 174

Query: 632  SVMFDSHTLVIAAKKICHWDDKADALIVRWNGKTVELPTDGE-DWITTGGGREVVVERTD 808
            S+MFD+HTLVIAAKK+ HWD+  DALIV+W+G  V++PTDGE +W T G  REVVVERTD
Sbjct: 175  SIMFDTHTLVIAAKKVAHWDNNIDALIVKWDGMVVDIPTDGEAEWRTNGEEREVVVERTD 234

Query: 809  ETNSIRVTVSGLLQMDVRVTPIGAEENRVHKYKLPSDDAFAHLETQFKFSNLTDLVEGVL 988
            + N++R TV+ L++++++V PIG EENR+H Y+LP +DAFAHLETQFKF NLTDLVEGVL
Sbjct: 235  DANTVRTTVANLVELNIKVRPIGKEENRIHNYQLPENDAFAHLETQFKFFNLTDLVEGVL 294

Query: 989  GKTYQPNYVSPVKIGVPMPMMGGEDKYHTSSLLSPLCGACRF 1114
            GKTY+P+YVSPVKIGVPMPMMGGEDKY   S+ SPLC  CRF
Sbjct: 295  GKTYRPDYVSPVKIGVPMPMMGGEDKYRIPSIFSPLCSVCRF 336


>ref|XP_002313517.1| predicted protein [Populus trichocarpa] gi|222849925|gb|EEE87472.1|
            predicted protein [Populus trichocarpa]
          Length = 343

 Score =  436 bits (1121), Expect = e-120
 Identities = 205/298 (68%), Positives = 240/298 (80%), Gaps = 2/298 (0%)
 Frame = +2

Query: 227  YDAASTHYTWLPPNKGKQERAFCQARGQCFNKTLXXXXXXXXXXXXXXXXVKGCFIDCSS 406
            +DAA THY+ L P+    ERAFCQARG C +KTL                 KGCFI+CSS
Sbjct: 37   FDAAITHYSMLSPSPSGNERAFCQARGACRSKTLVCPDQCKVRKPVKNKKQKGCFINCSS 96

Query: 407  KCETTCKFRLAKCDGYGSICYDPRFVGGDGVMFYFHGAKGGDFALVSDDDLHINAHFIGT 586
            KCE TCKFR   C+GYGS+CYDPRFVGGDGVMFYFHGAKGG+FA+VSDD+L INAHFIGT
Sbjct: 97   KCEVTCKFRRPNCNGYGSLCYDPRFVGGDGVMFYFHGAKGGNFAIVSDDNLQINAHFIGT 156

Query: 587  RPEGRTRDYTWVQALSVMFDSHTLVIAAKKICHWDDKADALIVRWNGKTVE-LPTDGE-D 760
            RP+GRTRD+TWVQALS+MFD+HTLVIAAK++  WDD  DAL V+WNG+TV+ +PTDG+ +
Sbjct: 157  RPKGRTRDFTWVQALSIMFDTHTLVIAAKRVSKWDDNFDALTVKWNGQTVDNIPTDGDAE 216

Query: 761  WITTGGGREVVVERTDETNSIRVTVSGLLQMDVRVTPIGAEENRVHKYKLPSDDAFAHLE 940
            W   G  REVVVERTD+TN++RV V+ L++++++V PIG EENR H Y+LP +DAFAHLE
Sbjct: 217  WRANGEEREVVVERTDDTNTVRVQVANLVELNIKVRPIGKEENRAHNYQLPENDAFAHLE 276

Query: 941  TQFKFSNLTDLVEGVLGKTYQPNYVSPVKIGVPMPMMGGEDKYHTSSLLSPLCGACRF 1114
            TQFKF NLTDLVEGVLGKTY+  YVSPVKIGVPMPMMGGEDKY T SL SPLC  CRF
Sbjct: 277  TQFKFFNLTDLVEGVLGKTYRAGYVSPVKIGVPMPMMGGEDKYQTPSLYSPLCNVCRF 334


>ref|NP_200860.1| late embryogenesis abundant protein-like protein [Arabidopsis
            thaliana] gi|9757754|dbj|BAB08235.1| unnamed protein
            product [Arabidopsis thaliana] gi|40823110|gb|AAR92259.1|
            At5g60520 [Arabidopsis thaliana]
            gi|332009956|gb|AED97339.1| late embryogenesis abundant
            protein-like protein [Arabidopsis thaliana]
          Length = 338

 Score =  431 bits (1109), Expect = e-118
 Identities = 210/312 (67%), Positives = 238/312 (76%), Gaps = 1/312 (0%)
 Frame = +2

Query: 224  AYDAASTHYTWLPPNKGKQERAFCQARGQCFNKTLXXXXXXXXXXXXXXXXVKGCFIDCS 403
            AYDAAST+Y  L P    QER  C ARG C  K L                 K CFIDCS
Sbjct: 30   AYDAASTNYNVLYPLGSGQERVQCLARGSCNQKILTCPKECPERKPKMNKKKKACFIDCS 89

Query: 404  SKCETTCKFRLAKCDGYGSICYDPRFVGGDGVMFYFHGAKGGDFALVSDDDLHINAHFIG 583
            SKCE TCK+R A C+GYGS+CYDPRFVGGDGVMFYFHG K G+FA+VSD++L INAHFIG
Sbjct: 90   SKCEVTCKWRKANCNGYGSLCYDPRFVGGDGVMFYFHGNKDGNFAIVSDENLQINAHFIG 149

Query: 584  TRPEGRTRDYTWVQALSVMFDSHTLVIAAKKICHWDDKADALIVRWNGKTVELPTDGE-D 760
            TRP GRTRD+TWVQA SVMFDSH LVIAAKK+  WDD  D+L+VRWNG+ VE+PT+GE +
Sbjct: 150  TRPAGRTRDFTWVQAFSVMFDSHNLVIAAKKVASWDDSVDSLVVRWNGEEVEVPTEGEAE 209

Query: 761  WITTGGGREVVVERTDETNSIRVTVSGLLQMDVRVTPIGAEENRVHKYKLPSDDAFAHLE 940
            W      REV+VERTDE N++RVTVSG++Q+D++V PIG EE+RVHKY+LP DDAFAHLE
Sbjct: 210  WRIDLDEREVIVERTDERNNVRVTVSGIVQIDIQVRPIGKEEDRVHKYQLPKDDAFAHLE 269

Query: 941  TQFKFSNLTDLVEGVLGKTYQPNYVSPVKIGVPMPMMGGEDKYHTSSLLSPLCGACRFMG 1120
            TQFKF NL+DLVEGVLGKTY+P YVSPVK GVPMPMMGGEDKY T SL SPLC  CRF G
Sbjct: 270  TQFKFFNLSDLVEGVLGKTYRPGYVSPVKTGVPMPMMGGEDKYQTPSLFSPLCNVCRFQG 329

Query: 1121 LPSAISTNNGVA 1156
                  T  GVA
Sbjct: 330  -----KTGPGVA 336


>gb|AFK33795.1| unknown [Lotus japonicus]
          Length = 393

 Score =  421 bits (1082), Expect = e-115
 Identities = 199/306 (65%), Positives = 235/306 (76%), Gaps = 1/306 (0%)
 Frame = +2

Query: 239  STHYTWLPPNKGKQERAFCQARGQCFNKTLXXXXXXXXXXXXXXXXVKGCFIDCSSKCET 418
            ++ Y  L      QERAFC+A+  C  KTL                 KGCFIDCSSKCE 
Sbjct: 85   ASEYEVLSALPSGQERAFCKAKNTCQFKTLSCPAECQKRKPKNNKKAKGCFIDCSSKCEA 144

Query: 419  TCKFRLAKCDGYGSICYDPRFVGGDGVMFYFHGAKGGDFALVSDDDLHINAHFIGTRPEG 598
            TCKFR +KCDGYG++CYDPRFVGGDGVMFYFHGAKGG+FA+ SDD+  INAHFIGTRPEG
Sbjct: 145  TCKFRKSKCDGYGALCYDPRFVGGDGVMFYFHGAKGGNFAIASDDEFQINAHFIGTRPEG 204

Query: 599  RTRDYTWVQALSVMFDSHTLVIAAKKICHWDDKADALIVRWNGKTVELPTDGE-DWITTG 775
            RTRDYTWVQALSVMFD+HTLVIAA ++  WDD  D+LIV+W+G+ + +PTDGE +W   G
Sbjct: 205  RTRDYTWVQALSVMFDTHTLVIAANRVSKWDDNVDSLIVKWDGEEISVPTDGEAEWRANG 264

Query: 776  GGREVVVERTDETNSIRVTVSGLLQMDVRVTPIGAEENRVHKYKLPSDDAFAHLETQFKF 955
              REVVVERTDETN++RVTVSGLL+MD+RV PIG +EN+VH Y+LPSDDAFAHLETQF+F
Sbjct: 265  DEREVVVERTDETNNVRVTVSGLLEMDIRVRPIGEKENKVHNYQLPSDDAFAHLETQFRF 324

Query: 956  SNLTDLVEGVLGKTYQPNYVSPVKIGVPMPMMGGEDKYHTSSLLSPLCGACRFMGLPSAI 1135
               TD +EG+LG+TY+P YVSPVK GVPMPMMGGEDKY T +L S  C  CRF   PS  
Sbjct: 325  KKHTDSIEGILGQTYRPGYVSPVKRGVPMPMMGGEDKYQTPTLYSTTCKHCRF-ERPSGS 383

Query: 1136 STNNGV 1153
            ++  G+
Sbjct: 384  ASTEGI 389


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