BLASTX nr result
ID: Cimicifuga21_contig00015985
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00015985
(1687 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001234645.1| ethylene-responsive elongation factor EF-Ts ... 482 e-133
ref|NP_192850.2| putative translation elongation factor Ts [Arab... 480 e-133
ref|XP_002872550.1| hypothetical protein ARALYDRAFT_489950 [Arab... 474 e-131
ref|XP_002524565.1| elongation factor ts, putative [Ricinus comm... 471 e-130
ref|NP_001061749.1| Os08g0399600 [Oryza sativa Japonica Group] g... 461 e-127
>ref|NP_001234645.1| ethylene-responsive elongation factor EF-Ts precursor [Solanum
lycopersicum] gi|5669636|gb|AAD46403.1|AF096247_1
ethylene-responsive elongation factor EF-Ts precursor
[Solanum lycopersicum]
Length = 391
Score = 482 bits (1240), Expect = e-133
Identities = 258/391 (65%), Positives = 312/391 (79%)
Frame = +3
Query: 117 MTFSRAARNHVVFIYNRFSTSRQSGHGYATWACRGTHIGDIREVSTSFASSNGCSRFSYE 296
M F R + + IY ++S SGH Y+T G I S + +G S
Sbjct: 1 MVFYRGVKRPIAIIYKSLNSSICSGHDYSTLTRYGNSIAK----SGGYFHQHGNGPRSCA 56
Query: 297 RQMFLRSFSAEVSASEQLNLIKLLRERTSAPIKDVKSALVGCNWDIEMAQKDLRKKGIVL 476
+ +R +SAE+S+SEQ+NLIK LRERTSAPIK+VK+ALV NWDIE AQKDLRK+GIVL
Sbjct: 57 --VSIRRYSAEISSSEQMNLIKQLRERTSAPIKEVKAALVTSNWDIEAAQKDLRKRGIVL 114
Query: 477 ASKKSSRTATEGLLALAQNDSKVAVIELNCETDFVARNEIFQYLALSLANIALSVESSAE 656
ASKKSSRTA EGLLALAQN+ K AVIELNCETDFVARNEIFQYLALSLA +AL +E S +
Sbjct: 115 ASKKSSRTAAEGLLALAQNERKAAVIELNCETDFVARNEIFQYLALSLAKLALLLEGS-Q 173
Query: 657 QVSTAFSLGSEYLERLKVNLDHPKLSGETTVQGVITEVAAMVGENVKLRRGYTISKSSNG 836
Q AF +G +LE LK+NLDHPKLSGE +VQ ITEVAAM+GENVKLRRG+ +S S G
Sbjct: 174 QSFAAFPIG--HLEELKLNLDHPKLSGEKSVQNAITEVAAMMGENVKLRRGFAMSAPSLG 231
Query: 837 VISSYLHTSPQPGLGRLAGILTLEVEDENAPLEPLTRVGSQLAMHIVAAKPLFLSRELVS 1016
VIS+YLHTSPQPG+GR+AGIL+LEVED+N + L RVGS+LAMH+VAAKPLFL++E VS
Sbjct: 232 VISTYLHTSPQPGVGRIAGILSLEVEDKNVSEDALQRVGSELAMHVVAAKPLFLTKEDVS 291
Query: 1017 SEALDSERDILKSQAESTGKPQMAIEKMVEGRIRKYMEEVVLMEQKFVANDAVNIKTLIN 1196
S+AL +ER+ILKSQAES+GKPQ+A+EKMVEGR+RKY EEVVLMEQKF+ ND +N+KTL++
Sbjct: 292 SDALSNEREILKSQAESSGKPQIAVEKMVEGRLRKYFEEVVLMEQKFIVNDTMNVKTLLS 351
Query: 1197 DLSKEVGSPVKVGNFFRMEVGEGIQRAETSN 1289
+LSK+VGSPVK+G+F RMEVGEG+QR E SN
Sbjct: 352 NLSKDVGSPVKIGSFLRMEVGEGLQRLEASN 382
>ref|NP_192850.2| putative translation elongation factor Ts [Arabidopsis thaliana]
gi|75287865|sp|Q5XF75.1|EFTS_ARATH RecName:
Full=Elongation factor Ts, mitochondrial; Short=EF-Ts;
Short=EF-TsMt; Flags: Precursor
gi|52627103|gb|AAU84678.1| At4g11120 [Arabidopsis
thaliana] gi|55167888|gb|AAV43776.1| At4g11120
[Arabidopsis thaliana] gi|332657575|gb|AEE82975.1|
putative translation elongation factor Ts [Arabidopsis
thaliana]
Length = 395
Score = 480 bits (1236), Expect = e-133
Identities = 256/395 (64%), Positives = 313/395 (79%), Gaps = 4/395 (1%)
Frame = +3
Query: 117 MTFSRAARNHVVFIYNRFSTSRQSGHGYATWACRGTHIGDIREVSTSFASSNGCSRFSYE 296
M F+RA R + Y S+ SG+ Y+T A + E + + SS S
Sbjct: 1 MAFARAVRRPIGVFYYSVSSRFSSGNEYSTVASKF-------ETLSQYKSSVPSGYTSLV 53
Query: 297 RQM--FLRSFSAEV--SASEQLNLIKLLRERTSAPIKDVKSALVGCNWDIEMAQKDLRKK 464
R F+RSFS+E + S+Q++LIK LRERTSAPIKDVK++LV CNWD+E AQKDLRK+
Sbjct: 54 RGFGNFIRSFSSEAPPAVSDQMSLIKQLRERTSAPIKDVKASLVECNWDLEAAQKDLRKR 113
Query: 465 GIVLASKKSSRTATEGLLALAQNDSKVAVIELNCETDFVARNEIFQYLALSLANIALSVE 644
G VLASKKSSRTA EG+LA+AQN+ KVAVIELNCETDFVARNEIFQYLAL++A AL VE
Sbjct: 114 GKVLASKKSSRTAAEGMLAVAQNEGKVAVIELNCETDFVARNEIFQYLALAMAKHALLVE 173
Query: 645 SSAEQVSTAFSLGSEYLERLKVNLDHPKLSGETTVQGVITEVAAMVGENVKLRRGYTISK 824
SS++QVS F G E E K+NLDHPK++GETTV +TEVAA++GENVK RRG+ +SK
Sbjct: 174 SSSQQVSGVFPFGPELFEEFKLNLDHPKVNGETTVSNAVTEVAAIMGENVKFRRGFLMSK 233
Query: 825 SSNGVISSYLHTSPQPGLGRLAGILTLEVEDENAPLEPLTRVGSQLAMHIVAAKPLFLSR 1004
SS GV+S+YLHTSPQPGLGR+AGI++LEVE EN LE + RVGS+LAMH+VAAKPLFLS+
Sbjct: 234 SSAGVLSAYLHTSPQPGLGRIAGIVSLEVEGENTQLEAIQRVGSELAMHVVAAKPLFLSK 293
Query: 1005 ELVSSEALDSERDILKSQAESTGKPQMAIEKMVEGRIRKYMEEVVLMEQKFVANDAVNIK 1184
+LVSSEA+ +ER+ILKSQAESTGK QMAIEK+VEGR+RKY EEV LMEQKF+ NDA+NIK
Sbjct: 294 DLVSSEAMANEREILKSQAESTGKNQMAIEKIVEGRLRKYFEEVALMEQKFIVNDAINIK 353
Query: 1185 TLINDLSKEVGSPVKVGNFFRMEVGEGIQRAETSN 1289
TL+++LSKEVGSPVKV +F R+EVGEGI+R E S+
Sbjct: 354 TLVDNLSKEVGSPVKVTDFLRVEVGEGIERLEASD 388
>ref|XP_002872550.1| hypothetical protein ARALYDRAFT_489950 [Arabidopsis lyrata subsp.
lyrata] gi|297318387|gb|EFH48809.1| hypothetical protein
ARALYDRAFT_489950 [Arabidopsis lyrata subsp. lyrata]
Length = 394
Score = 474 bits (1221), Expect = e-131
Identities = 254/394 (64%), Positives = 309/394 (78%), Gaps = 3/394 (0%)
Frame = +3
Query: 117 MTFSRAARNHVVFIYNRFSTSRQSGHGYATWACRGTHIGDIREVSTSFASSNGCSRFSYE 296
M F+RA R + Y S SG+ Y+T A + E + + SS S
Sbjct: 1 MAFARAVRRPIGVFYYSVSGRFSSGNDYSTVASK-------LETLSQYKSSVSSGYTSPV 53
Query: 297 RQM--FLRSFSAEVSA-SEQLNLIKLLRERTSAPIKDVKSALVGCNWDIEMAQKDLRKKG 467
R F+RSFS+E A S+Q++LIK LRERTSAPIKDVK++LV CNWD+E AQKDLRK+G
Sbjct: 54 RGFGSFIRSFSSEAPAVSDQMSLIKQLRERTSAPIKDVKASLVECNWDLEAAQKDLRKRG 113
Query: 468 IVLASKKSSRTATEGLLALAQNDSKVAVIELNCETDFVARNEIFQYLALSLANIALSVES 647
VLASKKSSRTA EG+LA+AQN+ KV VIELNCETDFVARNEIFQYLAL++A AL VE+
Sbjct: 114 KVLASKKSSRTAAEGMLAVAQNEGKVVVIELNCETDFVARNEIFQYLALAMAKHALLVEN 173
Query: 648 SAEQVSTAFSLGSEYLERLKVNLDHPKLSGETTVQGVITEVAAMVGENVKLRRGYTISKS 827
S++QVS G E E K+NLDHPK++GETTV +TEVAA++GENVK RRG+ +SKS
Sbjct: 174 SSQQVSGVLPFGPELFEEFKLNLDHPKVNGETTVSNAVTEVAAIMGENVKFRRGFLMSKS 233
Query: 828 SNGVISSYLHTSPQPGLGRLAGILTLEVEDENAPLEPLTRVGSQLAMHIVAAKPLFLSRE 1007
S GV+S+YLHTSPQPGLGR+AGI++LEVE EN LE + RVGS+LAM +VAAKPLFLS++
Sbjct: 234 SAGVLSAYLHTSPQPGLGRIAGIVSLEVEGENTQLEAIQRVGSELAMQVVAAKPLFLSKD 293
Query: 1008 LVSSEALDSERDILKSQAESTGKPQMAIEKMVEGRIRKYMEEVVLMEQKFVANDAVNIKT 1187
LVSSEA+ +ER+ILKSQAESTGK QMAIEK+VEGR+RKY EEV LMEQKF+ NDA+NIKT
Sbjct: 294 LVSSEAIANEREILKSQAESTGKNQMAIEKIVEGRLRKYFEEVALMEQKFILNDAINIKT 353
Query: 1188 LINDLSKEVGSPVKVGNFFRMEVGEGIQRAETSN 1289
L+++LSKEVGSPVKV NF R+EVGEGI+R E S+
Sbjct: 354 LVDNLSKEVGSPVKVTNFLRVEVGEGIERLEASD 387
>ref|XP_002524565.1| elongation factor ts, putative [Ricinus communis]
gi|313118247|sp|B9SEZ6.1|EFTS_RICCO RecName:
Full=Elongation factor Ts, mitochondrial; Short=EF-Ts;
Short=EF-TsMt; Flags: Precursor
gi|223536118|gb|EEF37773.1| elongation factor ts,
putative [Ricinus communis]
Length = 379
Score = 471 bits (1212), Expect = e-130
Identities = 242/330 (73%), Positives = 288/330 (87%), Gaps = 1/330 (0%)
Frame = +3
Query: 303 MFLRSFSAEV-SASEQLNLIKLLRERTSAPIKDVKSALVGCNWDIEMAQKDLRKKGIVLA 479
MF+R FSA +A+EQ++LIK LRERTSAPIKDVK++LV CNWDIE AQKDLRK+G VLA
Sbjct: 41 MFVRLFSAHAPAAAEQMSLIKQLRERTSAPIKDVKASLVDCNWDIEAAQKDLRKRGKVLA 100
Query: 480 SKKSSRTATEGLLALAQNDSKVAVIELNCETDFVARNEIFQYLALSLANIALSVESSAEQ 659
SKKS R ATEGLLALAQN+ K A+IELNCETDFVARN+IFQ LALSLA AL E++A+Q
Sbjct: 101 SKKSGRAATEGLLALAQNEGKAALIELNCETDFVARNDIFQCLALSLAKQALLTENTAQQ 160
Query: 660 VSTAFSLGSEYLERLKVNLDHPKLSGETTVQGVITEVAAMVGENVKLRRGYTISKSSNGV 839
S +G E LE L +NL+HPK+SGETTVQ ITEVAAM+GENVKLRRG+ +S S GV
Sbjct: 161 ASGIHPVGPECLEDLMINLEHPKISGETTVQNAITEVAAMMGENVKLRRGFVMSTSLPGV 220
Query: 840 ISSYLHTSPQPGLGRLAGILTLEVEDENAPLEPLTRVGSQLAMHIVAAKPLFLSRELVSS 1019
+S+YLHTSPQPGLGR+AG+L+LE+ED N+ L+ L VGS+LAMH+VAAKPLFL++ELVSS
Sbjct: 221 LSTYLHTSPQPGLGRIAGLLSLEIEDGNSQLDVLHHVGSELAMHVVAAKPLFLTKELVSS 280
Query: 1020 EALDSERDILKSQAESTGKPQMAIEKMVEGRIRKYMEEVVLMEQKFVANDAVNIKTLIND 1199
+AL+SER+ILKSQAESTGK QMAIEKMVEGR+RKY EEVVLMEQKF+ NDAVN+KT++N+
Sbjct: 281 DALESEREILKSQAESTGKSQMAIEKMVEGRLRKYYEEVVLMEQKFIINDAVNVKTVLNN 340
Query: 1200 LSKEVGSPVKVGNFFRMEVGEGIQRAETSN 1289
LSKEVGSPVK+G+FFRMEVGEGIQR E ++
Sbjct: 341 LSKEVGSPVKIGSFFRMEVGEGIQRLEATS 370
>ref|NP_001061749.1| Os08g0399600 [Oryza sativa Japonica Group]
gi|75294316|sp|Q6ZJS7.1|EFTS_ORYSJ RecName:
Full=Elongation factor Ts, mitochondrial; Short=EF-Ts;
Short=EF-TsMt; Flags: Precursor
gi|37805964|dbj|BAC99379.1| putative ethylene-responsive
elongation factor EF-Ts precursor [Oryza sativa Japonica
Group] gi|113623718|dbj|BAF23663.1| Os08g0399600 [Oryza
sativa Japonica Group] gi|215701316|dbj|BAG92740.1|
unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 461 bits (1187), Expect = e-127
Identities = 239/387 (61%), Positives = 298/387 (77%)
Frame = +3
Query: 117 MTFSRAARNHVVFIYNRFSTSRQSGHGYATWACRGTHIGDIREVSTSFASSNGCSRFSYE 296
M +S++AR ++ + R G+ Y+ + +SSN +
Sbjct: 1 MAWSQSARKPMIGLLFRAQQHSARGYSYSAFQAH-------------LSSSN-----VDQ 42
Query: 297 RQMFLRSFSAEVSASEQLNLIKLLRERTSAPIKDVKSALVGCNWDIEMAQKDLRKKGIVL 476
LR FS+EV ASEQ+NLIK LRERTSAPIKDVK++LV CNWDI++AQKDLRK+G+VL
Sbjct: 43 SATLLRRFSSEVPASEQMNLIKQLRERTSAPIKDVKASLVSCNWDIDVAQKDLRKRGVVL 102
Query: 477 ASKKSSRTATEGLLALAQNDSKVAVIELNCETDFVARNEIFQYLALSLANIALSVESSAE 656
A+KKSSRTA EGLLA+AQ++ + AV+ELNCETDFVARN++FQYLA SLA +ALS E
Sbjct: 103 AAKKSSRTAAEGLLAIAQDEKRAAVVELNCETDFVARNDVFQYLASSLAKLALSARDPGE 162
Query: 657 QVSTAFSLGSEYLERLKVNLDHPKLSGETTVQGVITEVAAMVGENVKLRRGYTISKSSNG 836
V F G +YLE L VNLDHPKLSGETTVQ +TEVAAMVGENVK RRG+ +S +++G
Sbjct: 163 LV---FPFGPDYLENLNVNLDHPKLSGETTVQSAVTEVAAMVGENVKFRRGFIMSTTAHG 219
Query: 837 VISSYLHTSPQPGLGRLAGILTLEVEDENAPLEPLTRVGSQLAMHIVAAKPLFLSRELVS 1016
V+ SY+HT PQPGLGRLAG++TLE ED NAPL+ L RVG +AMHIVA KPLFLS+ELVS
Sbjct: 220 VVCSYMHTCPQPGLGRLAGLITLEAEDSNAPLDALQRVGKSIAMHIVATKPLFLSKELVS 279
Query: 1017 SEALDSERDILKSQAESTGKPQMAIEKMVEGRIRKYMEEVVLMEQKFVANDAVNIKTLIN 1196
+ A+++ERDIL++QAES+GK QMA+EKMVEGR+RKY EEVVL+EQK+V ND+ NIK+++N
Sbjct: 280 ASAVENERDILRTQAESSGKSQMAMEKMVEGRLRKYFEEVVLLEQKYVVNDSTNIKSVLN 339
Query: 1197 DLSKEVGSPVKVGNFFRMEVGEGIQRA 1277
DLSKEVGS V VGNF RMEVGEG+ +A
Sbjct: 340 DLSKEVGSKVTVGNFARMEVGEGVSKA 366