BLASTX nr result

ID: Cimicifuga21_contig00015974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015974
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300852.1| predicted protein [Populus trichocarpa] gi|2...   268   3e-70
ref|XP_002520757.1| DNA repair helicase rad3/xp-d, putative [Ric...   259   1e-67
ref|XP_002277634.1| PREDICTED: DNA repair helicase UVH6 [Vitis v...   258   3e-67
ref|XP_004158946.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair h...   256   2e-66
ref|XP_003548117.1| PREDICTED: DNA repair helicase UVH6-like [Gl...   255   3e-66

>ref|XP_002300852.1| predicted protein [Populus trichocarpa] gi|222842578|gb|EEE80125.1|
           predicted protein [Populus trichocarpa]
          Length = 758

 Score =  268 bits (685), Expect = 3e-70
 Identities = 127/145 (87%), Positives = 140/145 (96%)
 Frame = +3

Query: 75  MKFQIEDVTVYFPYDHIYPEQYSYMLDLKRALDAKGHCLLEMPTGTGKTIALLSLITSYS 254
           MKFQIEDVTVYFPYDHIYPEQYSYM++LKRALDAKGHCLLEMPTGTGKTIALLSLITSY+
Sbjct: 1   MKFQIEDVTVYFPYDHIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYT 60

Query: 255 LAKPENPIKLLYCTRTVHEMEKTLAELRLLHNYQLKHLGDSAKILAIGLSSRKNLCINPN 434
           ++KP+  IKL+YCTRTVHEMEKTLAEL+LLHNYQ+KHLG +AKILAIGLSSRKNLC+NPN
Sbjct: 61  ISKPQGAIKLIYCTRTVHEMEKTLAELKLLHNYQVKHLGPAAKILAIGLSSRKNLCVNPN 120

Query: 435 VVSANSRDSVDAACRKRTASWVREL 509
           V+ AN+RDSVDAACRKRTASWVR L
Sbjct: 121 VLEANNRDSVDAACRKRTASWVRAL 145


>ref|XP_002520757.1| DNA repair helicase rad3/xp-d, putative [Ricinus communis]
           gi|223540142|gb|EEF41719.1| DNA repair helicase
           rad3/xp-d, putative [Ricinus communis]
          Length = 758

 Score =  259 bits (663), Expect = 1e-67
 Identities = 121/145 (83%), Positives = 139/145 (95%)
 Frame = +3

Query: 75  MKFQIEDVTVYFPYDHIYPEQYSYMLDLKRALDAKGHCLLEMPTGTGKTIALLSLITSYS 254
           MKFQIEDVTVYFPYD+IYPEQYSYM++LKRALDAKGHCLLEMPTGTGKTIALLSLITSYS
Sbjct: 1   MKFQIEDVTVYFPYDNIYPEQYSYMIELKRALDAKGHCLLEMPTGTGKTIALLSLITSYS 60

Query: 255 LAKPENPIKLLYCTRTVHEMEKTLAELRLLHNYQLKHLGDSAKILAIGLSSRKNLCINPN 434
           L+KP++P+KL+YCTRTVHEMEKTLAEL+LLHNYQ+KHLG +A+ILAIGLSSRKNLC+NP 
Sbjct: 61  LSKPQSPVKLIYCTRTVHEMEKTLAELKLLHNYQIKHLGPAARILAIGLSSRKNLCVNPR 120

Query: 435 VVSANSRDSVDAACRKRTASWVREL 509
           V++A +RDSVDA CRK TASW+R +
Sbjct: 121 VLAAENRDSVDAGCRKLTASWMRAM 145


>ref|XP_002277634.1| PREDICTED: DNA repair helicase UVH6 [Vitis vinifera]
          Length = 758

 Score =  258 bits (660), Expect = 3e-67
 Identities = 126/145 (86%), Positives = 136/145 (93%)
 Frame = +3

Query: 75  MKFQIEDVTVYFPYDHIYPEQYSYMLDLKRALDAKGHCLLEMPTGTGKTIALLSLITSYS 254
           MKFQIEDVTVYFPYD+IYPEQYSYM++LKRALDAKGH LLEMPTGTGKTIALLSLITSY+
Sbjct: 1   MKFQIEDVTVYFPYDNIYPEQYSYMVELKRALDAKGHALLEMPTGTGKTIALLSLITSYA 60

Query: 255 LAKPENPIKLLYCTRTVHEMEKTLAELRLLHNYQLKHLGDSAKILAIGLSSRKNLCINPN 434
           L+KP NPIKLLYCTRTVHEMEKTLAELRLLH YQL+HLG +A+ILA+GLSSRKNLCINP 
Sbjct: 61  LSKPSNPIKLLYCTRTVHEMEKTLAELRLLHQYQLRHLGPAARILALGLSSRKNLCINPA 120

Query: 435 VVSANSRDSVDAACRKRTASWVREL 509
           VVSA +RDSVDA CRK TASWVR L
Sbjct: 121 VVSAENRDSVDAGCRKLTASWVRAL 145


>ref|XP_004158946.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair helicase UVH6-like
           [Cucumis sativus]
          Length = 598

 Score =  256 bits (653), Expect = 2e-66
 Identities = 119/145 (82%), Positives = 137/145 (94%)
 Frame = +3

Query: 75  MKFQIEDVTVYFPYDHIYPEQYSYMLDLKRALDAKGHCLLEMPTGTGKTIALLSLITSYS 254
           MKFQ+EDVTVYFPYDHIYPEQY+YML+LKRALDAKGHCLLEMPTGTG TIALLSLITSY+
Sbjct: 1   MKFQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGXTIALLSLITSYA 60

Query: 255 LAKPENPIKLLYCTRTVHEMEKTLAELRLLHNYQLKHLGDSAKILAIGLSSRKNLCINPN 434
           L+KP+NP+KL+YCTRTVHEMEKTLAELRLLH+YQ++ LG  A+ILA+GLSSRKNLC+NPN
Sbjct: 61  LSKPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGPRAQILAVGLSSRKNLCVNPN 120

Query: 435 VVSANSRDSVDAACRKRTASWVREL 509
           V+++ SRDSVDA CRK TASWVR +
Sbjct: 121 VLASESRDSVDAGCRKLTASWVRAM 145


>ref|XP_003548117.1| PREDICTED: DNA repair helicase UVH6-like [Glycine max]
          Length = 758

 Score =  255 bits (651), Expect = 3e-66
 Identities = 120/143 (83%), Positives = 136/143 (95%)
 Frame = +3

Query: 75  MKFQIEDVTVYFPYDHIYPEQYSYMLDLKRALDAKGHCLLEMPTGTGKTIALLSLITSYS 254
           MKF+IED+TVYFPYD+IYPEQYSYM++LKRALDAKGHCLLEMPTGTGKTIALLSLITSY 
Sbjct: 1   MKFEIEDITVYFPYDNIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60

Query: 255 LAKPENPIKLLYCTRTVHEMEKTLAELRLLHNYQLKHLGDSAKILAIGLSSRKNLCINPN 434
           L+KP +P+KLLYCTRTVHEMEKTLAELRLLH+YQL+HLG +AKILA+GLSSRKNLC+NP 
Sbjct: 61  LSKPHSPLKLLYCTRTVHEMEKTLAELRLLHDYQLRHLGPAAKILALGLSSRKNLCVNPR 120

Query: 435 VVSANSRDSVDAACRKRTASWVR 503
           V++A +RDSVDA CRK TASWVR
Sbjct: 121 VLAAENRDSVDAGCRKLTASWVR 143


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