BLASTX nr result
ID: Cimicifuga21_contig00015972
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00015972
(1389 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284034.1| PREDICTED: nucleoporin NUP53 [Vitis vinifera... 439 e-120
ref|XP_003543628.1| PREDICTED: nucleoporin NUP53-like [Glycine max] 433 e-119
ref|NP_001240960.1| uncharacterized protein LOC100783752 [Glycin... 431 e-118
ref|XP_002515985.1| Nucleoporin NUP53, putative [Ricinus communi... 429 e-118
ref|XP_003597693.1| Nucleoporin NUP53 [Medicago truncatula] gi|3... 410 e-112
>ref|XP_002284034.1| PREDICTED: nucleoporin NUP53 [Vitis vinifera]
gi|297743215|emb|CBI36082.3| unnamed protein product
[Vitis vinifera]
Length = 317
Score = 439 bits (1128), Expect = e-120
Identities = 231/331 (69%), Positives = 259/331 (78%), Gaps = 2/331 (0%)
Frame = +2
Query: 116 MSNTVHRSARSSGKSLFFQDLASPVSSHRGKFASPGQAAAVSALWRENFGGTDPPPPPVF 295
MS TV R+ RS +SLFFQDLASPVSS RGKF S GQAAAVSALW +NF G+D PPPP++
Sbjct: 1 MSTTVQRTPRSGRQSLFFQDLASPVSSRRGKFTSSGQAAAVSALWHDNFAGSDLPPPPMY 60
Query: 296 TLEDRVDFSPESGVMDYPVSSDSKSDFKTPVRESRLDSLTPLKSSRFDASNSYSVKGGQQ 475
TLEDR DFSPESG++DYPVS + KSD +TPV S D LTP+K +++S S+
Sbjct: 61 TLEDRSDFSPESGILDYPVSPEIKSDLRTPVHGSGRDFLTPVKGKSEASTSSASLS---- 116
Query: 476 MQNXXXXXXXXXPGKSA-TEEEKGKGSPVEGVVHSGALITLPPPREVARPEMQRNSLPAD 652
P KS +EEKGKGSPVEGVV GALITLPPPREVARPEMQRN LPA
Sbjct: 117 ---------WWSPAKSGGDQEEKGKGSPVEGVVQPGALITLPPPREVARPEMQRNCLPAG 167
Query: 653 NLDEEEWVTVYGFSPGDTNLVLREFEKYGTILRHVPGPGNANWMHILYQSRFDAHKALSK 832
NLDEEEWVTVYGFSPGDTNLVLREFEK G IL+HVPGP +ANW+HILYQ+R DA KALSK
Sbjct: 168 NLDEEEWVTVYGFSPGDTNLVLREFEKCGVILKHVPGPRDANWIHILYQNRSDAQKALSK 227
Query: 833 SGMQINGVLIVGVKPLDPMQRQALNEGPNIQGFMTL-RPTSSRSTELTPSKASPRPYYLQ 1009
+GMQINGVLIVGVKPLDPMQRQALNE N QGFMTL P SSRS E P + SPRPYYLQ
Sbjct: 228 NGMQINGVLIVGVKPLDPMQRQALNERLNNQGFMTLPPPASSRSLESNPLRVSPRPYYLQ 287
Query: 1010 NNGQSAQRPAGVIASPAKSVVSRIADLMFGI 1102
NG +A++ +G IASPAKSVVS+I DLMFG+
Sbjct: 288 -NGSNARQSSGAIASPAKSVVSKIMDLMFGV 317
>ref|XP_003543628.1| PREDICTED: nucleoporin NUP53-like [Glycine max]
Length = 331
Score = 433 bits (1114), Expect = e-119
Identities = 223/332 (67%), Positives = 264/332 (79%), Gaps = 3/332 (0%)
Frame = +2
Query: 116 MSNTVHRSARSSGKSLFFQDLASPVSSHRGKFASPGQAAAVSALWRENFGGTDPPPPPVF 295
MS TV R+ RSS SLFFQDLASPVS+ RGKF+SPGQAAAVS+LWRENFG +D PPPPVF
Sbjct: 1 MSTTVQRTPRSSRHSLFFQDLASPVSARRGKFSSPGQAAAVSSLWRENFGSSDLPPPPVF 60
Query: 296 TLEDRVDFSPESGVMDYPVSSDSKSDFKTPVRESRLDSLTPLKSSRFDASNSYSVKGGQQ 475
TLEDR DFSPESG++DY +S ++KSD +TP++ S + TPLKS + +AS SY+++G QQ
Sbjct: 61 TLEDRSDFSPESGILDYQISPEAKSDTRTPIQTSNKEFSTPLKS-KSEASTSYALRGVQQ 119
Query: 476 MQNXXXXXXXXXP--GKSATEE-EKGKGSPVEGVVHSGALITLPPPREVARPEMQRNSLP 646
Q P KS E+ EKG+ SPVEGVV GALITLPPP EVARPE+QRNSLP
Sbjct: 120 NQQGSPGLSWWSPTTAKSVGEQDEKGRSSPVEGVVQPGALITLPPPLEVARPEVQRNSLP 179
Query: 647 ADNLDEEEWVTVYGFSPGDTNLVLREFEKYGTILRHVPGPGNANWMHILYQSRFDAHKAL 826
A NL+EEEWVTVYGFSPGDTN+VLREFEK G IL+HVPGP +ANW+HILYQ+R DAHKAL
Sbjct: 180 AGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWVHILYQNRSDAHKAL 239
Query: 827 SKSGMQINGVLIVGVKPLDPMQRQALNEGPNIQGFMTLRPTSSRSTELTPSKASPRPYYL 1006
+K+GMQINGVLIVGVK LDPMQRQALNE QGFM L S+R++E++ KA RPYYL
Sbjct: 240 NKNGMQINGVLIVGVKLLDPMQRQALNERLKNQGFMPLPLASARNSEVSTLKAPSRPYYL 299
Query: 1007 QNNGQSAQRPAGVIASPAKSVVSRIADLMFGI 1102
QN +A++ G IASP KS+VS+I DLMFG+
Sbjct: 300 QNGNSTARQTGGTIASPTKSLVSKIMDLMFGV 331
>ref|NP_001240960.1| uncharacterized protein LOC100783752 [Glycine max]
gi|255639315|gb|ACU19955.1| unknown [Glycine max]
Length = 331
Score = 431 bits (1107), Expect = e-118
Identities = 221/332 (66%), Positives = 264/332 (79%), Gaps = 3/332 (0%)
Frame = +2
Query: 116 MSNTVHRSARSSGKSLFFQDLASPVSSHRGKFASPGQAAAVSALWRENFGGTDPPPPPVF 295
MS TV R+ RSS +SLFFQDLASPVS+ RGKF+SP QAAAVS+LWRENFG +D PPPPVF
Sbjct: 1 MSTTVQRTPRSSRQSLFFQDLASPVSARRGKFSSPSQAAAVSSLWRENFGSSDLPPPPVF 60
Query: 296 TLEDRVDFSPESGVMDYPVSSDSKSDFKTPVRESRLDSLTPLKSSRFDASNSYSVKGGQQ 475
TLEDR DFSPESG++DY +S ++KSD +TP++ S + TP+KS + +AS SY+++G QQ
Sbjct: 61 TLEDRSDFSPESGILDYQISPETKSDTRTPIQTSNKEFSTPVKS-KSEASTSYALRGVQQ 119
Query: 476 MQNXXXXXXXXXP--GKSATEE-EKGKGSPVEGVVHSGALITLPPPREVARPEMQRNSLP 646
Q P KS E+ E+G+ SPVEGVV GALITLPPP EVARPE+QRNSLP
Sbjct: 120 NQQGSPGLSWWSPTTAKSGGEQDERGRSSPVEGVVQPGALITLPPPLEVARPEVQRNSLP 179
Query: 647 ADNLDEEEWVTVYGFSPGDTNLVLREFEKYGTILRHVPGPGNANWMHILYQSRFDAHKAL 826
A NL+EEEWVTVYGFSPGDTN+VLREFEK G IL+HVPGP +ANWMHILYQ+R DAHKAL
Sbjct: 180 AGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKAL 239
Query: 827 SKSGMQINGVLIVGVKPLDPMQRQALNEGPNIQGFMTLRPTSSRSTELTPSKASPRPYYL 1006
+K+GMQINGVLIVGVK LDPMQRQALNE QGFM L S+R++E++ KA RPYYL
Sbjct: 240 NKNGMQINGVLIVGVKLLDPMQRQALNERLKNQGFMPLPLPSARNSEVSSLKAPSRPYYL 299
Query: 1007 QNNGQSAQRPAGVIASPAKSVVSRIADLMFGI 1102
QN +A++ G IASP KS+VS+I DLMFG+
Sbjct: 300 QNGNSTARQTGGTIASPTKSLVSKIMDLMFGV 331
>ref|XP_002515985.1| Nucleoporin NUP53, putative [Ricinus communis]
gi|223544890|gb|EEF46405.1| Nucleoporin NUP53, putative
[Ricinus communis]
Length = 332
Score = 429 bits (1104), Expect = e-118
Identities = 226/333 (67%), Positives = 264/333 (79%), Gaps = 4/333 (1%)
Frame = +2
Query: 116 MSNTVHRSARSSG-KSLFFQDLASPVSSHRGKFASPGQAAAVSALWRENFGGTDPPPPPV 292
MS V+R+ +SSG +SLF+QDLASPVS+ +GKFA+PGQAAAVSALWRENFGG+D PPPP+
Sbjct: 1 MSTLVNRTPKSSGSRSLFYQDLASPVSARKGKFATPGQAAAVSALWRENFGGSDLPPPPM 60
Query: 293 FTLEDRVDFSPESGVMDYPVSSDSKSDFKTPVRESRLDSLTPLKSSRFDASNSYSVKGGQ 472
+TLEDR DFSPESG+ DYPVS + KSD ++P + S + + P KS + DAS S+++ G
Sbjct: 61 YTLEDRSDFSPESGIPDYPVSPEVKSDPRSPRQISGREFMIPSKS-KSDASTSFALMNGH 119
Query: 473 QMQNXXXXXXXXXPGK--SATEEEKGKGSPVEGVVHSGALITLPPPREVARPEMQRNSLP 646
Q Q P K S+ +E+KGKGSPVEGVV GALI LPP REVARPEMQRN+LP
Sbjct: 120 QNQQGSASSTWWSPAKASSSEQEDKGKGSPVEGVVQPGALIILPPLREVARPEMQRNNLP 179
Query: 647 ADNLDEEEWVTVYGFSPGDTNLVLREFEKYGTILRHVPGPGNANWMHILYQSRFDAHKAL 826
DEEEWVTVYGFSPGDTNLVLREFEK G IL+HVPGP +ANWMHILYQSR DA KAL
Sbjct: 180 TGKFDEEEWVTVYGFSPGDTNLVLREFEKCGVILKHVPGPRDANWMHILYQSRSDAQKAL 239
Query: 827 SKSGMQINGVLIVGVKPLDPMQRQALNEGPNIQGFMTL-RPTSSRSTELTPSKASPRPYY 1003
SK+GMQINGVLIVGVKP+DPMQRQALNE N QGFMTL P+SSRS+EL AS RPY+
Sbjct: 240 SKNGMQINGVLIVGVKPVDPMQRQALNERLNNQGFMTLPPPSSSRSSELKTLGASSRPYH 299
Query: 1004 LQNNGQSAQRPAGVIASPAKSVVSRIADLMFGI 1102
+QN SA++ G IASPAKSVVS+I D+MFGI
Sbjct: 300 IQNGSSSARQSGGSIASPAKSVVSKIFDVMFGI 332
>ref|XP_003597693.1| Nucleoporin NUP53 [Medicago truncatula] gi|355486741|gb|AES67944.1|
Nucleoporin NUP53 [Medicago truncatula]
Length = 330
Score = 410 bits (1053), Expect = e-112
Identities = 209/331 (63%), Positives = 252/331 (76%), Gaps = 2/331 (0%)
Frame = +2
Query: 116 MSNTVHRSARSSGKSLFFQDLASPVSSHRGKFASPGQAAAVSALWRENFGGTDPPPPPVF 295
MS T R+ RS +SLFFQDLASPV++ RGKF+SPGQ+ A S+LWRENFG +D PPPP F
Sbjct: 1 MSTTAQRTPRSGRQSLFFQDLASPVNARRGKFSSPGQSGASSSLWRENFGNSDLPPPPFF 60
Query: 296 TLEDRVDFSPESGVMDYPVSSDSKSDFKTPVRESRLDSLTPLKSSRFDASNSYSVKGGQQ 475
TLEDR DFSPESG++DY +S ++KSD KTP++ + TP K + +AS SY+++G QQ
Sbjct: 61 TLEDRSDFSPESGILDYQMSPETKSDHKTPIQTPNREFSTPAKG-KSEASTSYALRGVQQ 119
Query: 476 -MQNXXXXXXXXXPGKSATE-EEKGKGSPVEGVVHSGALITLPPPREVARPEMQRNSLPA 649
Q P KS E EEKG+GSPVEGVV GALITLPPP EVARPE+QRNSLPA
Sbjct: 120 NQQGSLSLNWWSSPAKSGGEQEEKGRGSPVEGVVQPGALITLPPPPEVARPEVQRNSLPA 179
Query: 650 DNLDEEEWVTVYGFSPGDTNLVLREFEKYGTILRHVPGPGNANWMHILYQSRFDAHKALS 829
NL+EEEWVTVYGFSP DTNLVLREFEK G IL+HVPGP +ANWMHILYQ+R A AL+
Sbjct: 180 GNLNEEEWVTVYGFSPNDTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSAAQNALN 239
Query: 830 KSGMQINGVLIVGVKPLDPMQRQALNEGPNIQGFMTLRPTSSRSTELTPSKASPRPYYLQ 1009
K+G+QINGVLI+GVKPLDPMQRQAL E N QGFM L ++R++E++ S+A RPYYLQ
Sbjct: 240 KNGIQINGVLIIGVKPLDPMQRQALTERLNNQGFMPLPLPTARNSEVSTSRAPSRPYYLQ 299
Query: 1010 NNGQSAQRPAGVIASPAKSVVSRIADLMFGI 1102
N + ++ G IASP KS S+I DLMF +
Sbjct: 300 NGNATTRQTGGTIASPTKSFASKIMDLMFAV 330