BLASTX nr result

ID: Cimicifuga21_contig00015964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015964
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510542.1| hypothetical protein RCOM_1598060 [Ricinus c...   186   2e-45
ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein lig...   180   1e-43
emb|CBI19874.3| unnamed protein product [Vitis vinifera]              180   1e-43
emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera]   179   3e-43
ref|XP_002307730.1| predicted protein [Populus trichocarpa] gi|2...   174   7e-42

>ref|XP_002510542.1| hypothetical protein RCOM_1598060 [Ricinus communis]
           gi|223551243|gb|EEF52729.1| hypothetical protein
           RCOM_1598060 [Ricinus communis]
          Length = 1427

 Score =  186 bits (471), Expect = 2e-45
 Identities = 100/173 (57%), Positives = 116/173 (67%)
 Frame = +1

Query: 1   GNTTCPITRQLLSANVLPKTNYVLKRLITSWKDQYPDIAQEFSYSESTPRASISSDTRSI 180
           GNTTCPITRQ LSAN LPKTNYVLKRLITSWK+QYPD+AQEFSYSE TPR S +S     
Sbjct: 483 GNTTCPITRQPLSANSLPKTNYVLKRLITSWKEQYPDLAQEFSYSE-TPRNSFNSSAIKE 541

Query: 181 EPQIQLESSLPLVGAAYSHRLIPPQTADLSVNNKKSNRFMRAXXXXXXXXXXXXQAAAEA 360
              + + S    +    +   I          +++S RF+R+            QA  + 
Sbjct: 542 STLVSIPSRFDFLSQNCAGNYI----------HQRSKRFVRSTVSTSPTSVIS-QATIDT 590

Query: 361 IINGIKPYTSCLCTSEDLQECEAAVSTIAKTWKDSKGDPGLHSYLSKPTIVNG 519
           IING+KPY SCLCTSE+LQECEAAV  IAK WKDSKGDPGLHSYL KPTI+NG
Sbjct: 591 IINGLKPYISCLCTSENLQECEAAVLAIAKLWKDSKGDPGLHSYLFKPTIING 643


>ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
            vinifera]
          Length = 1494

 Score =  180 bits (457), Expect = 1e-43
 Identities = 101/173 (58%), Positives = 114/173 (65%)
 Frame = +1

Query: 1    GNTTCPITRQLLSANVLPKTNYVLKRLITSWKDQYPDIAQEFSYSESTPRASISSDTRSI 180
            GNTTCPITRQ LSA+ LPKTNYVLKRLIT+WK+QYPD+AQEFSY E TPR S S  +   
Sbjct: 555  GNTTCPITRQPLSASSLPKTNYVLKRLITTWKEQYPDVAQEFSYPE-TPRNSFSPPSTK- 612

Query: 181  EPQIQLESSLPLVGAAYSHRLIPPQTADLSVNNKKSNRFMRAXXXXXXXXXXXXQAAAEA 360
              +I L SS P           P         N+K  RFM+             QAA EA
Sbjct: 613  --EIMLASS-PSCNP-------PDHKKSDDCTNQKCKRFMQTVVSTSPTSVIS-QAATEA 661

Query: 361  IINGIKPYTSCLCTSEDLQECEAAVSTIAKTWKDSKGDPGLHSYLSKPTIVNG 519
            +ING+KPY  CLC S+DLQECEAAV  IAK WKDSK DPG+HSYLS+PTIVNG
Sbjct: 662  VINGLKPYVLCLCNSDDLQECEAAVLAIAKMWKDSKADPGIHSYLSEPTIVNG 714


>emb|CBI19874.3| unnamed protein product [Vitis vinifera]
          Length = 1510

 Score =  180 bits (457), Expect = 1e-43
 Identities = 101/173 (58%), Positives = 114/173 (65%)
 Frame = +1

Query: 1    GNTTCPITRQLLSANVLPKTNYVLKRLITSWKDQYPDIAQEFSYSESTPRASISSDTRSI 180
            GNTTCPITRQ LSA+ LPKTNYVLKRLIT+WK+QYPD+AQEFSY E TPR S S  +   
Sbjct: 571  GNTTCPITRQPLSASSLPKTNYVLKRLITTWKEQYPDVAQEFSYPE-TPRNSFSPPSTK- 628

Query: 181  EPQIQLESSLPLVGAAYSHRLIPPQTADLSVNNKKSNRFMRAXXXXXXXXXXXXQAAAEA 360
              +I L SS P           P         N+K  RFM+             QAA EA
Sbjct: 629  --EIMLASS-PSCNP-------PDHKKSDDCTNQKCKRFMQTVVSTSPTSVIS-QAATEA 677

Query: 361  IINGIKPYTSCLCTSEDLQECEAAVSTIAKTWKDSKGDPGLHSYLSKPTIVNG 519
            +ING+KPY  CLC S+DLQECEAAV  IAK WKDSK DPG+HSYLS+PTIVNG
Sbjct: 678  VINGLKPYVLCLCNSDDLQECEAAVLAIAKMWKDSKADPGIHSYLSEPTIVNG 730


>emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera]
          Length = 1494

 Score =  179 bits (453), Expect = 3e-43
 Identities = 100/173 (57%), Positives = 113/173 (65%)
 Frame = +1

Query: 1    GNTTCPITRQLLSANVLPKTNYVLKRLITSWKDQYPDIAQEFSYSESTPRASISSDTRSI 180
            GNTTCPITRQ LSA+ LPKTNYVLKRLIT+WK+QYPD+AQEFSY E TPR S S  +   
Sbjct: 555  GNTTCPITRQPLSASSLPKTNYVLKRLITTWKEQYPDVAQEFSYPE-TPRNSFSPPSTK- 612

Query: 181  EPQIQLESSLPLVGAAYSHRLIPPQTADLSVNNKKSNRFMRAXXXXXXXXXXXXQAAAEA 360
              +I L SS P           P         N+K  RFM+             QAA EA
Sbjct: 613  --EIMLASS-PSCNP-------PDHKKSDDCTNQKCKRFMQTVVSTSPTSVIS-QAATEA 661

Query: 361  IINGIKPYTSCLCTSEDLQECEAAVSTIAKTWKDSKGDPGLHSYLSKPTIVNG 519
            +ING+KPY  CLC S+DLQECE AV  IAK WKDSK DPG+HSYLS+PTIVNG
Sbjct: 662  VINGLKPYVLCLCNSDDLQECEVAVLAIAKMWKDSKADPGIHSYLSEPTIVNG 714


>ref|XP_002307730.1| predicted protein [Populus trichocarpa] gi|222857179|gb|EEE94726.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score =  174 bits (441), Expect = 7e-42
 Identities = 98/173 (56%), Positives = 119/173 (68%)
 Frame = +1

Query: 1   GNTTCPITRQLLSANVLPKTNYVLKRLITSWKDQYPDIAQEFSYSESTPRASISSDTRSI 180
           GNTTCPITRQ LSAN LPKTNYVLKRLITSWK+Q+P++AQEFSYSE TPR S S  +   
Sbjct: 45  GNTTCPITRQPLSANSLPKTNYVLKRLITSWKEQHPELAQEFSYSE-TPRNSFSPSSLR- 102

Query: 181 EPQIQLESSLPLVGAAYSHRLIPPQTADLSVNNKKSNRFMRAXXXXXXXXXXXXQAAAEA 360
           E  +   +S      +++H     + +  S  +++S RF RA            QA  E 
Sbjct: 103 ENLLVSTASRTFYSPSHTHT----RNSTDSHMHQRSKRFARAEVSTSPTSVIS-QATIET 157

Query: 361 IINGIKPYTSCLCTSEDLQECEAAVSTIAKTWKDSKGDPGLHSYLSKPTIVNG 519
           IING+KPY S LCTSE+L+ECEAAVS +AK WKDSKGDP + SYLS+PTIVNG
Sbjct: 158 IINGLKPYISSLCTSENLEECEAAVSAVAKLWKDSKGDPAVLSYLSEPTIVNG 210


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