BLASTX nr result

ID: Cimicifuga21_contig00015897 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015897
         (714 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38190.3| unnamed protein product [Vitis vinifera]              153   3e-35
ref|NP_196829.2| RING finger protein [Arabidopsis thaliana] gi|3...   143   4e-32
ref|XP_004152316.1| PREDICTED: uncharacterized protein LOC101223...   137   2e-30
ref|XP_004140650.1| PREDICTED: uncharacterized protein LOC101204...   134   2e-29
dbj|BAK01652.1| predicted protein [Hordeum vulgare subsp. vulgare]    134   2e-29

>emb|CBI38190.3| unnamed protein product [Vitis vinifera]
          Length = 349

 Score =  153 bits (387), Expect = 3e-35
 Identities = 76/111 (68%), Positives = 88/111 (79%), Gaps = 3/111 (2%)
 Frame = -1

Query: 438 DAPRRPHSGVWFMIQASKNQAKEPSLPQISKRYIRINDGKMTVRLLIKYLANKLRLNSES 259
           +A  RPHSGVWF++QAS+NQAKEP LPQI K Y+RI DG+MTVRLL+KY+ NKLRL+SES
Sbjct: 237 NASHRPHSGVWFLLQASQNQAKEPFLPQIPKSYLRIKDGRMTVRLLMKYVVNKLRLDSES 296

Query: 258 EVEITCRGQLLPHFLTLQHVRDNIWCSTNAAVSL---FSIIDHIMVLNYGR 115
           E+EITCRGQ L  F TLQHVRDNIW   +A   L    S  DH+MVLNYGR
Sbjct: 297 EIEITCRGQQLLPFFTLQHVRDNIWSPRDALTFLQPDSSTSDHVMVLNYGR 347


>ref|NP_196829.2| RING finger protein [Arabidopsis thaliana]
           gi|332004488|gb|AED91871.1| RING finger protein
           [Arabidopsis thaliana]
          Length = 387

 Score =  143 bits (360), Expect = 4e-32
 Identities = 76/122 (62%), Positives = 87/122 (71%), Gaps = 10/122 (8%)
 Frame = -1

Query: 450 MRVIDAPRRPHSGVWFMIQASKNQAKEPSLPQISKRYIRINDGKMTVRLLIKYLANKLRL 271
           +RVID PRRPHSG+WF++QAS+NQ  EP LPQI K Y+RI DGKMTVRLL+KYL NKLRL
Sbjct: 263 LRVIDPPRRPHSGIWFLLQASQNQTVEPFLPQIPKSYLRIKDGKMTVRLLMKYLVNKLRL 322

Query: 270 NSES-EVEITCRGQLLPHFLTLQHVRDNIWCSTNAAVSL---------FSIIDHIMVLNY 121
             ES +VEI CRGQ L   LTLQHVRD IW  +    SL          S  DH+MVL+Y
Sbjct: 323 EHESQQVEIRCRGQELEPVLTLQHVRDAIWRGSRDTSSLSQNITLLPNSSTSDHLMVLHY 382

Query: 120 GR 115
           GR
Sbjct: 383 GR 384


>ref|XP_004152316.1| PREDICTED: uncharacterized protein LOC101223230 [Cucumis sativus]
          Length = 352

 Score =  137 bits (346), Expect = 2e-30
 Identities = 68/118 (57%), Positives = 91/118 (77%), Gaps = 6/118 (5%)
 Frame = -1

Query: 450 MRVIDAPRRPHSGVWFMIQASKNQAKEPSLPQISKRYIRINDGKMTVRLLIKYLANKLRL 271
           +R+I+ PRRPHSG+WF ++A +NQ KEP LPQISK Y+RI D KMTV L++KYL NKL L
Sbjct: 234 VRIINPPRRPHSGIWFTLKALENQGKEPFLPQISKNYLRIKDEKMTVSLVMKYLVNKLHL 293

Query: 270 NSESEVEITCRGQLLPHFLTLQHVRDNIWCSTNAAVSLFSII------DHIMVLNYGR 115
           +SESE+EI CRGQ L  F T+Q VRD IW +T++  SLF+++      +H+M+L+YGR
Sbjct: 294 DSESEIEIRCRGQELVPFWTMQDVRDRIWNNTSSN-SLFTLLPQSSTTNHLMLLHYGR 350


>ref|XP_004140650.1| PREDICTED: uncharacterized protein LOC101204945 [Cucumis sativus]
          Length = 334

 Score =  134 bits (336), Expect = 2e-29
 Identities = 69/118 (58%), Positives = 87/118 (73%), Gaps = 5/118 (4%)
 Frame = -1

Query: 450 MRVIDAPRRPHSGVWFMIQASK-NQAKEPSLPQISKRYIRINDGKMTVRLLIKYLANKLR 274
           +RVID PRRPHSG+WF +Q  + NQ K+P LP  S  Y+RI DGKMTVRLLIKYL  KLR
Sbjct: 207 VRVIDPPRRPHSGIWFSLQPLELNQGKQPVLPHRSS-YLRIKDGKMTVRLLIKYLMKKLR 265

Query: 273 LNSESEVEITCRGQLLPHFLTLQHVRDNIWCSTNAAVSLF----SIIDHIMVLNYGRI 112
           L++E E+E+ CRG+ L   LT+QH+RD IWCS ++A++      S IDHIMVL+Y  I
Sbjct: 266 LDNELEIEMRCRGEKLEGCLTMQHIRDKIWCSKDSALTTLLPNSSTIDHIMVLHYAII 323


>dbj|BAK01652.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 332

 Score =  134 bits (336), Expect = 2e-29
 Identities = 65/106 (61%), Positives = 81/106 (76%), Gaps = 4/106 (3%)
 Frame = -1

Query: 420 HSGVWFMIQASKNQAKEPSLPQISKRYIRINDGKMTVRLLIKYLANKLRLNSESEVEITC 241
           ++GVWF+ QA+ +Q +EP LPQI + Y+RI DG++TVRLLIKYLANKL L  ESEVEITC
Sbjct: 225 NAGVWFVFQAAPHQGREPFLPQIPRSYLRIKDGRVTVRLLIKYLANKLGLEDESEVEITC 284

Query: 240 RGQLLPHFLTLQHVRDNIWCSTNAAVSL----FSIIDHIMVLNYGR 115
           RG+ LP F+TLQHVRD+IWC  +A  +      S  +HIMVL YGR
Sbjct: 285 RGRPLPQFMTLQHVRDSIWCQRDAVSTSVAPDMSTANHIMVLQYGR 330


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