BLASTX nr result

ID: Cimicifuga21_contig00015834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015834
         (913 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK96655.1| unknown [Populus trichocarpa x Populus deltoides]      291   1e-76
ref|XP_002519497.1| conserved hypothetical protein [Ricinus comm...   289   7e-76
ref|XP_002282285.1| PREDICTED: thylakoid lumenal 15.0 kDa protei...   288   1e-75
ref|NP_001147270.1| permeases of the major facilitator superfami...   287   2e-75
ref|XP_002322890.1| predicted protein [Populus trichocarpa] gi|2...   286   4e-75

>gb|ABK96655.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 220

 Score =  291 bits (746), Expect = 1e-76
 Identities = 143/183 (78%), Positives = 157/183 (85%)
 Frame = +3

Query: 156 TKWASGFRVKSVNFXXXXXXXXXXXXXXXXYAEAAKVGVNKPDLLPKDFSSVIDVAGFLT 335
           TKW   FR KS+NF                 A+A KVGVNKP+LLPK+F++VIDVAGFL+
Sbjct: 39  TKWVLDFRSKSLNFAFSGALALGLSLPGVGVADA-KVGVNKPELLPKEFTTVIDVAGFLS 97

Query: 336 SGQEKRLAQEIDDLEKDTGFKLRVLAQNYPDTPGLAIKDFWQVDDRTIVFVADPTFGNIL 515
            GQEKRLA+EI D+EKDTGFKLRVLAQNYPDTPGLAI+DFWQVDDRT+VFVADP FGNIL
Sbjct: 98  DGQEKRLAEEISDIEKDTGFKLRVLAQNYPDTPGLAIRDFWQVDDRTVVFVADPNFGNIL 157

Query: 516 NFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGEDASIESAVMAISSCLREPVGQNNCS 695
           NFNVGA+VDLDIPRSFWSRLAGKYGN+FYWKEKGEDASIE+AVMAISSCLREPVG NNCS
Sbjct: 158 NFNVGASVDLDIPRSFWSRLAGKYGNMFYWKEKGEDASIEAAVMAISSCLREPVGPNNCS 217

Query: 696 EVK 704
           EVK
Sbjct: 218 EVK 220


>ref|XP_002519497.1| conserved hypothetical protein [Ricinus communis]
           gi|223541360|gb|EEF42911.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 256

 Score =  289 bits (739), Expect = 7e-76
 Identities = 145/196 (73%), Positives = 161/196 (82%), Gaps = 1/196 (0%)
 Frame = +3

Query: 156 TKWASGFRVKSVNFXXXXXXXXXXXXXXXXYAEAAKVGVNKPDLLPKDFSSVIDVAGFLT 335
           + W   FR K++ F                +AEA KVGVNKP+LLPK+F++VIDVAGFL+
Sbjct: 41  SNWVVDFRSKTLKFLLSGALTLGLSLSGVEFAEA-KVGVNKPELLPKEFTTVIDVAGFLS 99

Query: 336 SGQEKRLAQEIDDLEKDTGFKLRVLAQNYPDTPGLAIKDFWQVDDRTIVFVADPTFGNIL 515
            GQEKRLAQEI D+EKDTGFKLRVLAQNYPDTPGLAIKDFW+VDDRTIVFVADPTFGNIL
Sbjct: 100 DGQEKRLAQEIQDIEKDTGFKLRVLAQNYPDTPGLAIKDFWRVDDRTIVFVADPTFGNIL 159

Query: 516 NFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGEDASIESAVMAISSCLREPVGQNNCS 695
           NFNVGA++DLDIPRSFWSRLAGKYGNIFYWKEKGEDASIESAVMAIS+CLREPVG NNCS
Sbjct: 160 NFNVGASIDLDIPRSFWSRLAGKYGNIFYWKEKGEDASIESAVMAISNCLREPVGPNNCS 219

Query: 696 E-VK*CCYICNSSHKM 740
           E V   C I N  + +
Sbjct: 220 ELVVSVCVIQNREYSL 235


>ref|XP_002282285.1| PREDICTED: thylakoid lumenal 15.0 kDa protein 2, chloroplastic
           [Vitis vinifera] gi|297741641|emb|CBI32773.3| unnamed
           protein product [Vitis vinifera]
          Length = 220

 Score =  288 bits (737), Expect = 1e-75
 Identities = 145/182 (79%), Positives = 155/182 (85%), Gaps = 1/182 (0%)
 Frame = +3

Query: 162 WASGFRVKSVNFXXXXXXXXXXXXXXXXYAEA-AKVGVNKPDLLPKDFSSVIDVAGFLTS 338
           W + FR K+VN                    A AKVGVNKPDLLPK+FSSVIDVAGFL+ 
Sbjct: 39  WVTHFRSKAVNLALSSALTLGLSLTFTGVECAEAKVGVNKPDLLPKEFSSVIDVAGFLSD 98

Query: 339 GQEKRLAQEIDDLEKDTGFKLRVLAQNYPDTPGLAIKDFWQVDDRTIVFVADPTFGNILN 518
           GQEKRLAQEI ++EKDTGFKLRVLAQNYPDTPGLAIK+FWQVDDRTIVFVADPTFGNILN
Sbjct: 99  GQEKRLAQEITNIEKDTGFKLRVLAQNYPDTPGLAIKEFWQVDDRTIVFVADPTFGNILN 158

Query: 519 FNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGEDASIESAVMAISSCLREPVGQNNCSE 698
           FNVGA+VDLDIPRSFWSRLAGKYGNIFYWKEKGEDASIE+AVMAIS+CLREPVG NNCSE
Sbjct: 159 FNVGASVDLDIPRSFWSRLAGKYGNIFYWKEKGEDASIEAAVMAISNCLREPVGPNNCSE 218

Query: 699 VK 704
           VK
Sbjct: 219 VK 220


>ref|NP_001147270.1| permeases of the major facilitator superfamily [Zea mays]
           gi|195609322|gb|ACG26491.1| permeases of the major
           facilitator superfamily [Zea mays]
          Length = 224

 Score =  287 bits (735), Expect = 2e-75
 Identities = 141/180 (78%), Positives = 154/180 (85%)
 Frame = +3

Query: 162 WASGFRVKSVNFXXXXXXXXXXXXXXXXYAEAAKVGVNKPDLLPKDFSSVIDVAGFLTSG 341
           W S FR KS++                  AEAAKVGVNKP+LLPK+F+SVIDVAGFL+ G
Sbjct: 44  WCSRFRSKSLSLAFSGALALGLSLSGVGIAEAAKVGVNKPELLPKEFTSVIDVAGFLSDG 103

Query: 342 QEKRLAQEIDDLEKDTGFKLRVLAQNYPDTPGLAIKDFWQVDDRTIVFVADPTFGNILNF 521
           QEKR+A+EI DLEKDTGFKLRVLAQNYP TPGLAIKD+WQVDD TIVFVADPTFGNILNF
Sbjct: 104 QEKRIAEEISDLEKDTGFKLRVLAQNYPVTPGLAIKDYWQVDDSTIVFVADPTFGNILNF 163

Query: 522 NVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGEDASIESAVMAISSCLREPVGQNNCSEV 701
           NVGA+VDLDIPRSFWSRLAGKYGN+FYWKEKGEDASIE+AVMAISSCLREPVG NNC+EV
Sbjct: 164 NVGASVDLDIPRSFWSRLAGKYGNMFYWKEKGEDASIEAAVMAISSCLREPVGANNCAEV 223


>ref|XP_002322890.1| predicted protein [Populus trichocarpa] gi|222867520|gb|EEF04651.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score =  286 bits (733), Expect = 4e-75
 Identities = 141/183 (77%), Positives = 154/183 (84%)
 Frame = +3

Query: 156 TKWASGFRVKSVNFXXXXXXXXXXXXXXXXYAEAAKVGVNKPDLLPKDFSSVIDVAGFLT 335
           T W   FR KS+NF                    AKVGVNKP+LLPK+F++VIDVAGFL+
Sbjct: 39  TNWVLDFRSKSLNFAFSGALALGVGVAD------AKVGVNKPELLPKEFTTVIDVAGFLS 92

Query: 336 SGQEKRLAQEIDDLEKDTGFKLRVLAQNYPDTPGLAIKDFWQVDDRTIVFVADPTFGNIL 515
            GQEKRLA+EI D+EKDTGFKLRVLAQNYPDTPGLAI+DFWQVDDRT+VFVADP FGNIL
Sbjct: 93  DGQEKRLAEEISDIEKDTGFKLRVLAQNYPDTPGLAIRDFWQVDDRTVVFVADPNFGNIL 152

Query: 516 NFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGEDASIESAVMAISSCLREPVGQNNCS 695
           NFNVGA+VDLDIPRSFWSRLAGKYGN+FYWKEKGEDASIE+AVMAISSCLREPVG NNCS
Sbjct: 153 NFNVGASVDLDIPRSFWSRLAGKYGNMFYWKEKGEDASIEAAVMAISSCLREPVGPNNCS 212

Query: 696 EVK 704
           EVK
Sbjct: 213 EVK 215


Top