BLASTX nr result

ID: Cimicifuga21_contig00015770 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015770
         (713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307857.1| predicted protein [Populus trichocarpa] gi|2...    67   3e-09
ref|XP_002323172.1| predicted protein [Populus trichocarpa] gi|2...    64   4e-08
gb|AFN88222.1| VQ motif-containing protein [Phaseolus vulgaris]        58   2e-06
ref|XP_002266806.1| PREDICTED: uncharacterized protein LOC100241...    58   2e-06
emb|CAN73253.1| hypothetical protein VITISV_006028 [Vitis vinifera]    58   2e-06

>ref|XP_002307857.1| predicted protein [Populus trichocarpa] gi|222853833|gb|EEE91380.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 48/134 (35%), Positives = 57/134 (42%), Gaps = 11/134 (8%)
 Frame = -2

Query: 673 SPTDWMQFYQHTLTGDGLGQXXXXXXXXXXXXXXXXXXXXXXXXTSNNIS---------- 524
           +PTDW QFYQ  L+   L                            N +           
Sbjct: 8   NPTDWSQFYQQNLSNQVLPPIRPMFRDRVADSTTVTTTTINTSGVPNPMGSSNSSSSAGR 67

Query: 523 HLNPEGRVSKPXXXXXXXXXA-PTTLVNTDTTNFRAMVQQFTGVSNPSITFGAHNDAQNI 347
           HL+PEGRV+KP           PTTL+NTDTTNFRAMVQQFTG  +     G+  +A N 
Sbjct: 68  HLSPEGRVAKPIRKRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPSAPFASGSQINATNF 127

Query: 346 DFRNIMPPGDGAYR 305
            F        GAYR
Sbjct: 128 GF------ALGAYR 135


>ref|XP_002323172.1| predicted protein [Populus trichocarpa] gi|222867802|gb|EEF04933.1|
           predicted protein [Populus trichocarpa]
          Length = 250

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 42/121 (34%), Positives = 53/121 (43%), Gaps = 10/121 (8%)
 Frame = -2

Query: 673 SPTDWMQFYQHTLTGDGLGQXXXXXXXXXXXXXXXXXXXXXXXXTSNN---------ISH 521
           +P DW QFYQ  L+   L                          + +N           H
Sbjct: 8   NPPDWSQFYQQNLSNQVLTPIRPMFNDRGVADVNIITSTTMDTASISNPMGSANPSSSGH 67

Query: 520 LNPEGRVSKPXXXXXXXXXA-PTTLVNTDTTNFRAMVQQFTGVSNPSITFGAHNDAQNID 344
           L+PEGRV+KP           PTTL+NTDTTNFRAMVQQFTG  +     G+  +A N  
Sbjct: 68  LSPEGRVAKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPSAPFATGSQINATNFG 127

Query: 343 F 341
           +
Sbjct: 128 Y 128


>gb|AFN88222.1| VQ motif-containing protein [Phaseolus vulgaris]
          Length = 167

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 31/53 (58%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
 Frame = -2

Query: 526 SHLNPEGRVSKPXXXXXXXXXA-PTTLVNTDTTNFRAMVQQFTGVSNPSITFG 371
           + L+PEGRVSKP           PTTL+NTD TNFRAMVQQFTG  + S  FG
Sbjct: 43  AQLSPEGRVSKPVRRRCRASRRTPTTLLNTDATNFRAMVQQFTGAPSASDLFG 95


>ref|XP_002266806.1| PREDICTED: uncharacterized protein LOC100241630 [Vitis vinifera]
          Length = 211

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 32/56 (57%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
 Frame = -2

Query: 526 SHLNPEGRVSKPXXXXXXXXXA-PTTLVNTDTTNFRAMVQQFTGVSNPSITFGAHN 362
           +HL PEGRV+KP           PTTL+NTDT+NFRAMVQQFTG   PS  F   N
Sbjct: 57  AHLTPEGRVAKPIRRRSRASRRTPTTLLNTDTSNFRAMVQQFTG--GPSAPFAGGN 110


>emb|CAN73253.1| hypothetical protein VITISV_006028 [Vitis vinifera]
          Length = 224

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 32/56 (57%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
 Frame = -2

Query: 526 SHLNPEGRVSKPXXXXXXXXXA-PTTLVNTDTTNFRAMVQQFTGVSNPSITFGAHN 362
           +HL PEGRV+KP           PTTL+NTDT+NFRAMVQQFTG   PS  F   N
Sbjct: 57  AHLTPEGRVAKPIRRRSRASRRTPTTLLNTDTSNFRAMVQQFTG--GPSAPFAGGN 110


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