BLASTX nr result

ID: Cimicifuga21_contig00015739 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015739
         (1604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278373.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   728   0.0  
ref|XP_004164669.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   726   0.0  
ref|XP_004152924.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   722   0.0  
ref|XP_002319844.1| predicted protein [Populus trichocarpa] gi|2...   715   0.0  
ref|XP_003544936.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   703   0.0  

>ref|XP_002278373.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32 [Vitis vinifera]
          Length = 750

 Score =  728 bits (1879), Expect = 0.0
 Identities = 368/505 (72%), Positives = 420/505 (83%), Gaps = 2/505 (0%)
 Frame = +2

Query: 95   KPKSKPQFSR--KKKWLSEVEEIKLLESWIEFGKPDSGSNPLSIKSLPSDIPIGRLDDNS 268
            +P S+PQ  +  K+K L+E++EI+LLESWIEFGKPDSGSNPLS+   PS+ PIGR+D +S
Sbjct: 3    RPNSRPQKRQFVKQKRLTELQEIELLESWIEFGKPDSGSNPLSLAPPPSNAPIGRIDGDS 62

Query: 269  FSKYAGCENFVQYPISRKTKDGLTQAKYAETTAIQRASLPHTLCGRDILGAAKTGSGKTL 448
            FS YAGC+ F + P+S+KT DGL +++Y   T IQRASLPH+LCGRDILGAAKTGSGKTL
Sbjct: 63   FSPYAGCDRFDRLPLSQKTIDGLKKSEYVTMTEIQRASLPHSLCGRDILGAAKTGSGKTL 122

Query: 449  AFVIPILEKLYRARWGPEDGVGCIIITPTRELAGQIFEVFKLVGKYHGFSAGLLIGGRKD 628
            AF+IP+LEKLYR RWGPEDGVG III+PTREL GQ+F+V K VGKYH FSAGLLIGGRKD
Sbjct: 123  AFLIPVLEKLYRLRWGPEDGVGSIIISPTRELTGQLFDVLKSVGKYHSFSAGLLIGGRKD 182

Query: 629  VEVEQEHVNDLNILVCTPGRLLQHMDETHNFDCSQLQVLVLDEADRILDVGFKQAINAII 808
            V +E+EHVN+LNILVCTPGRLLQHMDET NFDCSQLQVLVLDEADRILDVGFK+A+NAII
Sbjct: 183  VGMEKEHVNELNILVCTPGRLLQHMDETPNFDCSQLQVLVLDEADRILDVGFKKALNAII 242

Query: 809  SQLPKKRQTLLFSATQTKSIQDLARLSLKDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 988
            SQLPK RQTLLFSATQTKS+QDLARLSLKDP                             
Sbjct: 243  SQLPKHRQTLLFSATQTKSVQDLARLSLKDP----------------------------- 273

Query: 989  EYISVHEESVTSTPSRLKQSIMIVPLDQKLDVLWSFLKAHLSSTILVFFSTCKQVKFAFE 1168
            EY+SVHEES T+TP+RL+Q+ MIVPLDQKLD+LWSF+KAHL+S ILVFF++ KQVKF FE
Sbjct: 274  EYLSVHEESATATPNRLQQTAMIVPLDQKLDMLWSFIKAHLNSRILVFFASRKQVKFVFE 333

Query: 1169 AFKKLRPGIPLKCLHGRMKQEVRMGIYSQFCEGWSALFSTDVASRGLDFNKAVDWVVQVD 1348
            AFKKLRPGIPLKCLHG+M Q+ RMGIYSQFCE  S LFSTDVASRGLDFNK VDWV+QVD
Sbjct: 334  AFKKLRPGIPLKCLHGKMNQQKRMGIYSQFCESRSVLFSTDVASRGLDFNKGVDWVIQVD 393

Query: 1349 CPDDAASYIHRVGRTARYHSGGKSVLFLTPSEEVMLKKLEAAKVPVQLMKLNTKRLQSVS 1528
            CP+D A+YIHRVGRTARYHS G+SVLFL PSE  MLKKLE AK+P+ L+K NTKRLQ VS
Sbjct: 394  CPEDVAAYIHRVGRTARYHSEGRSVLFLVPSETEMLKKLEVAKIPIHLIKANTKRLQQVS 453

Query: 1529 GLLAALLVKYPAMQALAQRAFITYL 1603
             LL  LLVKY  M+ LAQ+AFITYL
Sbjct: 454  RLLQDLLVKYDDMRYLAQKAFITYL 478


>ref|XP_004164669.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32-like [Cucumis
            sativus]
          Length = 734

 Score =  726 bits (1874), Expect = 0.0
 Identities = 368/504 (73%), Positives = 415/504 (82%)
 Frame = +2

Query: 92   MKPKSKPQFSRKKKWLSEVEEIKLLESWIEFGKPDSGSNPLSIKSLPSDIPIGRLDDNSF 271
            MK K K + S K+K LSE EEIKLL SWIE  KPDSGSNP+S+   P + PIGR+DD+++
Sbjct: 1    MKQKFKSKNSGKQKRLSENEEIKLLNSWIESQKPDSGSNPMSLPPPPPNAPIGRIDDDTY 60

Query: 272  SKYAGCENFVQYPISRKTKDGLTQAKYAETTAIQRASLPHTLCGRDILGAAKTGSGKTLA 451
            S+YAG   F Q PIS KTKDGL +A++ + T IQ+ASLPH LCGRDILGAAKTGSGKTLA
Sbjct: 61   SRYAGATRFDQLPISSKTKDGLRKAEFIDMTDIQKASLPHALCGRDILGAAKTGSGKTLA 120

Query: 452  FVIPILEKLYRARWGPEDGVGCIIITPTRELAGQIFEVFKLVGKYHGFSAGLLIGGRKDV 631
            F+IP+LEKLYR RWGPE GVG III+PTREL  Q+F+V K VGK+H FSAGLLIGGRKDV
Sbjct: 121  FLIPVLEKLYRERWGPEFGVGSIIISPTRELGAQLFDVLKAVGKFHNFSAGLLIGGRKDV 180

Query: 632  EVEQEHVNDLNILVCTPGRLLQHMDETHNFDCSQLQVLVLDEADRILDVGFKQAINAIIS 811
              E+EHVN+LNILVCTPGRLLQHMDET NFDCSQLQVLVLDEADRILDVGFK+ +NAIIS
Sbjct: 181  NTEKEHVNELNILVCTPGRLLQHMDETPNFDCSQLQVLVLDEADRILDVGFKKTLNAIIS 240

Query: 812  QLPKKRQTLLFSATQTKSIQDLARLSLKDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE 991
            QLPK RQT LFSATQTKS+QDLARLSLKDP                             E
Sbjct: 241  QLPKHRQTFLFSATQTKSVQDLARLSLKDP-----------------------------E 271

Query: 992  YISVHEESVTSTPSRLKQSIMIVPLDQKLDVLWSFLKAHLSSTILVFFSTCKQVKFAFEA 1171
            Y+SVHEES T+TP+ L+Q+ M+VPL+QKLD+LWSF+KAHL+S ILVF S+CKQVKF FE 
Sbjct: 272  YLSVHEESTTATPNSLQQTAMVVPLEQKLDMLWSFIKAHLNSKILVFLSSCKQVKFVFET 331

Query: 1172 FKKLRPGIPLKCLHGRMKQEVRMGIYSQFCEGWSALFSTDVASRGLDFNKAVDWVVQVDC 1351
            FKKLRPGIPLKCLHGRMKQ+ RMGIYS+FCE  S LFSTDVASRGLDFNKAVDWVVQVDC
Sbjct: 332  FKKLRPGIPLKCLHGRMKQDKRMGIYSEFCEKRSVLFSTDVASRGLDFNKAVDWVVQVDC 391

Query: 1352 PDDAASYIHRVGRTARYHSGGKSVLFLTPSEEVMLKKLEAAKVPVQLMKLNTKRLQSVSG 1531
            P+D ASYIHRVGRTARYHSGGKSVLF+ PSE  ML++LE+AKVP+QL+K NTKRLQ VSG
Sbjct: 392  PEDVASYIHRVGRTARYHSGGKSVLFIMPSEMKMLEQLESAKVPIQLIKANTKRLQPVSG 451

Query: 1532 LLAALLVKYPAMQALAQRAFITYL 1603
            LL+ALLVKYP  Q LAQRAFITYL
Sbjct: 452  LLSALLVKYPNFQQLAQRAFITYL 475


>ref|XP_004152924.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32-like [Cucumis
            sativus]
          Length = 734

 Score =  722 bits (1864), Expect = 0.0
 Identities = 367/504 (72%), Positives = 414/504 (82%)
 Frame = +2

Query: 92   MKPKSKPQFSRKKKWLSEVEEIKLLESWIEFGKPDSGSNPLSIKSLPSDIPIGRLDDNSF 271
            MK K K + S K+K LSE EEIKLL SWIE  KPDSGSNP+S+     + PIGR+DD+++
Sbjct: 1    MKQKFKSKNSGKQKRLSENEEIKLLNSWIESQKPDSGSNPMSLPPPLPNAPIGRIDDDTY 60

Query: 272  SKYAGCENFVQYPISRKTKDGLTQAKYAETTAIQRASLPHTLCGRDILGAAKTGSGKTLA 451
            S+YAG   F Q PIS KTKDGL +A++ + T IQ+ASLPH LCGRDILGAAKTGSGKTLA
Sbjct: 61   SRYAGATRFDQLPISSKTKDGLRKAEFIDMTDIQKASLPHALCGRDILGAAKTGSGKTLA 120

Query: 452  FVIPILEKLYRARWGPEDGVGCIIITPTRELAGQIFEVFKLVGKYHGFSAGLLIGGRKDV 631
            F+IP+LEKLYR RWGPE GVG III+PTREL  Q+F+V K VGK+H FSAGLLIGGRKDV
Sbjct: 121  FLIPVLEKLYRERWGPEFGVGSIIISPTRELGAQLFDVLKAVGKFHNFSAGLLIGGRKDV 180

Query: 632  EVEQEHVNDLNILVCTPGRLLQHMDETHNFDCSQLQVLVLDEADRILDVGFKQAINAIIS 811
              E+EHVN+LNILVCTPGRLLQHMDET NFDCSQLQVLVLDEADRILDVGFK+ +NAIIS
Sbjct: 181  NTEKEHVNELNILVCTPGRLLQHMDETPNFDCSQLQVLVLDEADRILDVGFKKTLNAIIS 240

Query: 812  QLPKKRQTLLFSATQTKSIQDLARLSLKDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE 991
            QLPK RQT LFSATQTKS+QDLARLSLKDP                             E
Sbjct: 241  QLPKHRQTFLFSATQTKSVQDLARLSLKDP-----------------------------E 271

Query: 992  YISVHEESVTSTPSRLKQSIMIVPLDQKLDVLWSFLKAHLSSTILVFFSTCKQVKFAFEA 1171
            Y+SVHEES T+TP+ L+Q+ M+VPL+QKLD+LWSF+KAHL+S ILVF S+CKQVKF FE 
Sbjct: 272  YLSVHEESTTATPNSLQQTAMVVPLEQKLDMLWSFIKAHLNSKILVFLSSCKQVKFVFET 331

Query: 1172 FKKLRPGIPLKCLHGRMKQEVRMGIYSQFCEGWSALFSTDVASRGLDFNKAVDWVVQVDC 1351
            FKKLRPGIPLKCLHGRMKQ+ RMGIYS+FCE  S LFSTDVASRGLDFNKAVDWVVQVDC
Sbjct: 332  FKKLRPGIPLKCLHGRMKQDKRMGIYSEFCEKRSVLFSTDVASRGLDFNKAVDWVVQVDC 391

Query: 1352 PDDAASYIHRVGRTARYHSGGKSVLFLTPSEEVMLKKLEAAKVPVQLMKLNTKRLQSVSG 1531
            P+D ASYIHRVGRTARYHSGGKSVLF+ PSE  ML++LE+AKVP+QL+K NTKRLQ VSG
Sbjct: 392  PEDVASYIHRVGRTARYHSGGKSVLFIMPSEMKMLEQLESAKVPIQLIKANTKRLQPVSG 451

Query: 1532 LLAALLVKYPAMQALAQRAFITYL 1603
            LL+ALLVKYP  Q LAQRAFITYL
Sbjct: 452  LLSALLVKYPNFQQLAQRAFITYL 475


>ref|XP_002319844.1| predicted protein [Populus trichocarpa] gi|222858220|gb|EEE95767.1|
            predicted protein [Populus trichocarpa]
          Length = 766

 Score =  715 bits (1845), Expect = 0.0
 Identities = 364/503 (72%), Positives = 415/503 (82%)
 Frame = +2

Query: 95   KPKSKPQFSRKKKWLSEVEEIKLLESWIEFGKPDSGSNPLSIKSLPSDIPIGRLDDNSFS 274
            KPKSK   +R+ +  +E EEI  L  WI+  KPDSG+NPLS+  LP D PIG L D+ FS
Sbjct: 5    KPKSKQ--TRRDRHEAEQEEISKLNQWIDSQKPDSGTNPLSLPPLPKDAPIGPLQDDKFS 62

Query: 275  KYAGCENFVQYPISRKTKDGLTQAKYAETTAIQRASLPHTLCGRDILGAAKTGSGKTLAF 454
            +Y+G   F + P+S++T+DGL +A +++ T IQRASLPH+LCGRDILGAAKTGSGKTLAF
Sbjct: 63   RYSGATMFKELPLSKRTQDGLKRANFSKMTDIQRASLPHSLCGRDILGAAKTGSGKTLAF 122

Query: 455  VIPILEKLYRARWGPEDGVGCIIITPTRELAGQIFEVFKLVGKYHGFSAGLLIGGRKDVE 634
            +IPILEKLY+ RWG EDGVG III+PTRELAGQ+F+V K VGK+H FSAGLLIGGRK+VE
Sbjct: 123  IIPILEKLYKERWGSEDGVGGIIISPTRELAGQLFDVLKTVGKFHNFSAGLLIGGRKEVE 182

Query: 635  VEQEHVNDLNILVCTPGRLLQHMDETHNFDCSQLQVLVLDEADRILDVGFKQAINAIISQ 814
            +E+EHVN L+ILVCTPGRLLQHMDET NFDCSQLQVLVLDEADRILDVGFK+ +NAI++Q
Sbjct: 183  MEKEHVNALSILVCTPGRLLQHMDETPNFDCSQLQVLVLDEADRILDVGFKKTLNAIVAQ 242

Query: 815  LPKKRQTLLFSATQTKSIQDLARLSLKDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEY 994
            LPK RQTLLFSATQTKSIQDLARLSLKDP                             EY
Sbjct: 243  LPKHRQTLLFSATQTKSIQDLARLSLKDP-----------------------------EY 273

Query: 995  ISVHEESVTSTPSRLKQSIMIVPLDQKLDVLWSFLKAHLSSTILVFFSTCKQVKFAFEAF 1174
            ISVHE++ T+TPSRL+Q+ MIVPL+QKLD+LWSF+KAHL+S ILVF S+CKQVKF FEAF
Sbjct: 274  ISVHEDAETATPSRLQQTAMIVPLEQKLDMLWSFVKAHLNSKILVFLSSCKQVKFVFEAF 333

Query: 1175 KKLRPGIPLKCLHGRMKQEVRMGIYSQFCEGWSALFSTDVASRGLDFNKAVDWVVQVDCP 1354
            KKLRPGIPLKCLHGRMKQE RMGIYSQFCE  S LFSTDVASRGLDFNKAVDWVVQVDCP
Sbjct: 334  KKLRPGIPLKCLHGRMKQEKRMGIYSQFCESHSVLFSTDVASRGLDFNKAVDWVVQVDCP 393

Query: 1355 DDAASYIHRVGRTARYHSGGKSVLFLTPSEEVMLKKLEAAKVPVQLMKLNTKRLQSVSGL 1534
            DD ASYIHRVGRTARY +GG+SVLFL PSE  ML+KL+ AK+PVQ +K NTKRLQ VSGL
Sbjct: 394  DDVASYIHRVGRTARYLAGGRSVLFLMPSEMKMLEKLQTAKIPVQFIKANTKRLQPVSGL 453

Query: 1535 LAALLVKYPAMQALAQRAFITYL 1603
            L+ALLVKYP MQ LAQRAFITYL
Sbjct: 454  LSALLVKYPDMQQLAQRAFITYL 476


>ref|XP_003544936.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32-like [Glycine max]
          Length = 743

 Score =  703 bits (1814), Expect = 0.0
 Identities = 358/503 (71%), Positives = 408/503 (81%)
 Frame = +2

Query: 95   KPKSKPQFSRKKKWLSEVEEIKLLESWIEFGKPDSGSNPLSIKSLPSDIPIGRLDDNSFS 274
            +PKSK    RK++ +SE EEI LL SWI+F  PDSGSNP+S+  LP + P+GRL+DN++S
Sbjct: 3    RPKSKE--FRKQQRVSEEEEINLLNSWIQFQPPDSGSNPMSLPRLPKNSPVGRLEDNTYS 60

Query: 275  KYAGCENFVQYPISRKTKDGLTQAKYAETTAIQRASLPHTLCGRDILGAAKTGSGKTLAF 454
            +YAG   F Q+P+S+KTKD L ++K+   T IQRASLPH LCGRDILGAAKTGSGKTLAF
Sbjct: 61   RYAGASRFDQFPLSKKTKDALRESKFVAMTDIQRASLPHALCGRDILGAAKTGSGKTLAF 120

Query: 455  VIPILEKLYRARWGPEDGVGCIIITPTRELAGQIFEVFKLVGKYHGFSAGLLIGGRKDVE 634
            +IP+LEKLYR RWGPEDGVG III+PTRELAGQ+F+V K+VGK+H FSAGLLIGGRKDV+
Sbjct: 121  IIPVLEKLYRERWGPEDGVGSIIISPTRELAGQLFDVLKVVGKHHNFSAGLLIGGRKDVD 180

Query: 635  VEQEHVNDLNILVCTPGRLLQHMDETHNFDCSQLQVLVLDEADRILDVGFKQAINAIISQ 814
            +E+E VN+LNIL+CTPGRLLQHMDET NFDCSQ+QVLVLDEADRILD GFK+ +NAIISQ
Sbjct: 181  MEKERVNELNILICTPGRLLQHMDETPNFDCSQMQVLVLDEADRILDSGFKKELNAIISQ 240

Query: 815  LPKKRQTLLFSATQTKSIQDLARLSLKDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEY 994
            LPK+RQTLLFSATQTKSIQDLARLSLKDP                             EY
Sbjct: 241  LPKRRQTLLFSATQTKSIQDLARLSLKDP-----------------------------EY 271

Query: 995  ISVHEESVTSTPSRLKQSIMIVPLDQKLDVLWSFLKAHLSSTILVFFSTCKQVKFAFEAF 1174
            +SVHEESVTSTP+ LKQ +MIVPL+QKLD+LWSF+K HL S  LVF S+CKQVKF FEAF
Sbjct: 272  LSVHEESVTSTPTLLKQIVMIVPLEQKLDMLWSFIKTHLQSKTLVFLSSCKQVKFVFEAF 331

Query: 1175 KKLRPGIPLKCLHGRMKQEVRMGIYSQFCEGWSALFSTDVASRGLDFNKAVDWVVQVDCP 1354
            KKL PGIPLKCLHGRMKQE RM IYS+FCE  S LFSTDVA+RGLDFNKAVDWVVQVDCP
Sbjct: 332  KKLHPGIPLKCLHGRMKQERRMAIYSEFCEKRSVLFSTDVAARGLDFNKAVDWVVQVDCP 391

Query: 1355 DDAASYIHRVGRTARYHSGGKSVLFLTPSEEVMLKKLEAAKVPVQLMKLNTKRLQSVSGL 1534
            ++ ASYIHRVGRTARY S GKSVLFL PSE  ML+KL+AAKVPV   K   + LQ VS L
Sbjct: 392  ENVASYIHRVGRTARYKSDGKSVLFLLPSEIQMLEKLKAAKVPVHFNKPRQELLQPVSSL 451

Query: 1535 LAALLVKYPAMQALAQRAFITYL 1603
            LA+LL KYP MQ  AQRAFITYL
Sbjct: 452  LASLLAKYPDMQHRAQRAFITYL 474


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