BLASTX nr result

ID: Cimicifuga21_contig00015725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015725
         (676 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139665.1| PREDICTED: thioredoxin-like protein 4B-like ...   265   5e-69
ref|XP_002265712.1| PREDICTED: thioredoxin-like protein 4B isofo...   263   2e-68
dbj|BAD43912.1| hypothetical protein [Arabidopsis thaliana]           262   5e-68
ref|NP_189117.2| mRNA splicing factor, thioredoxin-like U5 snRNP...   262   5e-68
ref|XP_002885671.1| hypothetical protein ARALYDRAFT_479992 [Arab...   259   4e-67

>ref|XP_004139665.1| PREDICTED: thioredoxin-like protein 4B-like isoform 1 [Cucumis
           sativus] gi|449443802|ref|XP_004139666.1| PREDICTED:
           thioredoxin-like protein 4B-like isoform 2 [Cucumis
           sativus] gi|449475408|ref|XP_004154445.1| PREDICTED:
           thioredoxin-like protein 4B-like isoform 1 [Cucumis
           sativus] gi|449475410|ref|XP_004154446.1| PREDICTED:
           thioredoxin-like protein 4B-like isoform 2 [Cucumis
           sativus]
          Length = 151

 Score =  265 bits (678), Expect = 5e-69
 Identities = 126/150 (84%), Positives = 141/150 (94%)
 Frame = +3

Query: 54  SFLLTTLTKKREVDSIIRDTIDKALVLRFGKASDLVCLQLDDILAKSVRDVSKFASVALV 233
           S+LL TLTKK EVDS+IRDTIDK L+LRFG+ SD VCL LDDILAK  R+VSKFASVALV
Sbjct: 2   SYLLRTLTKKGEVDSLIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASVALV 61

Query: 234 DIDSEDVQVYVKYFDITLIPSTIFFFNAHHMKMDSGTADHTKWIGAFHRKQDFIDVVEAI 413
           DIDSE++QVYVKYFDITLIPST+FFFNAHHMKMDSGTADHTKW+GAFH+KQDFIDVVEAI
Sbjct: 62  DIDSEEIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWVGAFHQKQDFIDVVEAI 121

Query: 414 YRGAMKGKLIVSCPLPPERVPKFQLIFKDV 503
           +RGAMKGKLIV+CPLPPER+PK+QL +KDV
Sbjct: 122 FRGAMKGKLIVNCPLPPERIPKYQLFYKDV 151


>ref|XP_002265712.1| PREDICTED: thioredoxin-like protein 4B isoform 1 [Vitis vinifera]
           gi|359480353|ref|XP_003632435.1| PREDICTED:
           thioredoxin-like protein 4B isoform 2 [Vitis vinifera]
           gi|297744299|emb|CBI37269.3| unnamed protein product
           [Vitis vinifera]
          Length = 151

 Score =  263 bits (672), Expect = 2e-68
 Identities = 123/150 (82%), Positives = 144/150 (96%)
 Frame = +3

Query: 54  SFLLTTLTKKREVDSIIRDTIDKALVLRFGKASDLVCLQLDDILAKSVRDVSKFASVALV 233
           SFL+TTL +K+EVDSIIRDTIDK LVLRFG+++D VCL LDDIL+KS R+VSKFA+VALV
Sbjct: 2   SFLMTTLREKKEVDSIIRDTIDKVLVLRFGRSTDSVCLHLDDILSKSAREVSKFATVALV 61

Query: 234 DIDSEDVQVYVKYFDITLIPSTIFFFNAHHMKMDSGTADHTKWIGAFHRKQDFIDVVEAI 413
           DIDSED+QVYVKYFDITLIPST+FFFNAHHMKMDSG+ADHTKW+GAF RKQDFIDVVEAI
Sbjct: 62  DIDSEDIQVYVKYFDITLIPSTVFFFNAHHMKMDSGSADHTKWVGAFDRKQDFIDVVEAI 121

Query: 414 YRGAMKGKLIVSCPLPPERVPKFQLIFKDV 503
           +RGAMKGKLIV+CPLPPER+PK+QL+++D+
Sbjct: 122 FRGAMKGKLIVTCPLPPERIPKYQLLYRDL 151


>dbj|BAD43912.1| hypothetical protein [Arabidopsis thaliana]
          Length = 151

 Score =  262 bits (669), Expect = 5e-68
 Identities = 123/150 (82%), Positives = 139/150 (92%)
 Frame = +3

Query: 54  SFLLTTLTKKREVDSIIRDTIDKALVLRFGKASDLVCLQLDDILAKSVRDVSKFASVALV 233
           S+LL TLT K E+D +IRDTID+ LVLRFG++SD VCLQ D+ILAKSVRDVSKFA VALV
Sbjct: 2   SYLLKTLTTKEEIDRVIRDTIDEVLVLRFGRSSDAVCLQHDEILAKSVRDVSKFAKVALV 61

Query: 234 DIDSEDVQVYVKYFDITLIPSTIFFFNAHHMKMDSGTADHTKWIGAFHRKQDFIDVVEAI 413
           D+DSEDVQVYVKYFDITL PSTIFFFNAHHMK+DSGTADHTKW+GAFH KQDFIDVVEAI
Sbjct: 62  DVDSEDVQVYVKYFDITLFPSTIFFFNAHHMKLDSGTADHTKWVGAFHIKQDFIDVVEAI 121

Query: 414 YRGAMKGKLIVSCPLPPERVPKFQLIFKDV 503
           YRGAMKGK+IV CP+PPER+PK+QL++KDV
Sbjct: 122 YRGAMKGKMIVQCPIPPERIPKYQLVYKDV 151


>ref|NP_189117.2| mRNA splicing factor, thioredoxin-like U5 snRNP [Arabidopsis
           thaliana] gi|44917529|gb|AAS49089.1| At3g24730
           [Arabidopsis thaliana] gi|332643419|gb|AEE76940.1| mRNA
           splicing factor, thioredoxin-like U5 snRNP [Arabidopsis
           thaliana]
          Length = 159

 Score =  262 bits (669), Expect = 5e-68
 Identities = 123/150 (82%), Positives = 139/150 (92%)
 Frame = +3

Query: 54  SFLLTTLTKKREVDSIIRDTIDKALVLRFGKASDLVCLQLDDILAKSVRDVSKFASVALV 233
           S+LL TLT K E+D +IRDTID+ LVLRFG++SD VCLQ D+ILAKSVRDVSKFA VALV
Sbjct: 10  SYLLKTLTTKEEIDRVIRDTIDEVLVLRFGRSSDAVCLQHDEILAKSVRDVSKFAKVALV 69

Query: 234 DIDSEDVQVYVKYFDITLIPSTIFFFNAHHMKMDSGTADHTKWIGAFHRKQDFIDVVEAI 413
           D+DSEDVQVYVKYFDITL PSTIFFFNAHHMK+DSGTADHTKW+GAFH KQDFIDVVEAI
Sbjct: 70  DVDSEDVQVYVKYFDITLFPSTIFFFNAHHMKLDSGTADHTKWVGAFHIKQDFIDVVEAI 129

Query: 414 YRGAMKGKLIVSCPLPPERVPKFQLIFKDV 503
           YRGAMKGK+IV CP+PPER+PK+QL++KDV
Sbjct: 130 YRGAMKGKMIVQCPIPPERIPKYQLVYKDV 159


>ref|XP_002885671.1| hypothetical protein ARALYDRAFT_479992 [Arabidopsis lyrata subsp.
           lyrata] gi|297331511|gb|EFH61930.1| hypothetical protein
           ARALYDRAFT_479992 [Arabidopsis lyrata subsp. lyrata]
          Length = 151

 Score =  259 bits (661), Expect = 4e-67
 Identities = 124/150 (82%), Positives = 139/150 (92%)
 Frame = +3

Query: 54  SFLLTTLTKKREVDSIIRDTIDKALVLRFGKASDLVCLQLDDILAKSVRDVSKFASVALV 233
           S+LL TLTKK E+D IIRDTID+ LVLRFG+ SD VCLQ D+ILAKSVRDVSKFA VALV
Sbjct: 2   SYLLKTLTKKEEIDRIIRDTIDEVLVLRFGRFSDDVCLQHDEILAKSVRDVSKFAKVALV 61

Query: 234 DIDSEDVQVYVKYFDITLIPSTIFFFNAHHMKMDSGTADHTKWIGAFHRKQDFIDVVEAI 413
           D+DSE+VQVYVKYFDITL PSTIFFFNAHHMK+DSGTADHTKWIGAFH KQDFI+VVEAI
Sbjct: 62  DVDSEEVQVYVKYFDITLFPSTIFFFNAHHMKLDSGTADHTKWIGAFHIKQDFINVVEAI 121

Query: 414 YRGAMKGKLIVSCPLPPERVPKFQLIFKDV 503
           YRGAMKGK+IV CP+PPER+PK+QL++KDV
Sbjct: 122 YRGAMKGKMIVQCPIPPERIPKYQLLYKDV 151


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