BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015717
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]     62   4e-08
sp|Q8LHH9.1|SHL2_ORYSJ RecName: Full=Probable RNA-dependent RNA ...    59   4e-07
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]      59   4e-07
gb|EEE54718.1| hypothetical protein OsJ_02054 [Oryza sativa Japo...    59   4e-07
dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]     59   4e-07

>emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/37 (78%), Positives = 33/37 (89%)
 Frame = -1

Query: 217 DGIGMLTPDLAIKVAEKL*LGVNPPSAYQIRFTGYKG 107
           DGIGM++ DLAI+VAEKL L VNPPSAYQIR+ GYKG
Sbjct: 588 DGIGMISADLAIEVAEKLHLNVNPPSAYQIRYAGYKG 624


>sp|Q8LHH9.1|SHL2_ORYSJ RecName: Full=Probable RNA-dependent RNA polymerase SHL2; AltName:
           Full=Protein SHOOTLESS 2 gi|21328146|dbj|BAC00725.1|
           putative RNA-dependent RNA polymerase [Oryza sativa
           Japonica Group] gi|157279691|dbj|BAF80151.1| SHOOTLESS2
           [Oryza sativa Japonica Group]
          Length = 1218

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/37 (72%), Positives = 32/37 (86%)
 Frame = -1

Query: 217 DGIGMLTPDLAIKVAEKL*LGVNPPSAYQIRFTGYKG 107
           DGIG +TPDLA++VAE+L L  NPPSAYQIRF G+KG
Sbjct: 611 DGIGKITPDLALEVAERLQLTDNPPSAYQIRFAGFKG 647


>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = -1

Query: 217 DGIGMLTPDLAIKVAEKL*LGVNPPSAYQIRFTGYKG 107
           DGIGM++ DLAI+VAEKL L VNPPSAYQIR+ G KG
Sbjct: 588 DGIGMISADLAIEVAEKLHLSVNPPSAYQIRYAGCKG 624


>gb|EEE54718.1| hypothetical protein OsJ_02054 [Oryza sativa Japonica Group]
          Length = 1571

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/37 (72%), Positives = 32/37 (86%)
 Frame = -1

Query: 217  DGIGMLTPDLAIKVAEKL*LGVNPPSAYQIRFTGYKG 107
            DGIG +TPDLA++VAE+L L  NPPSAYQIRF G+KG
Sbjct: 999  DGIGKITPDLALEVAERLQLTDNPPSAYQIRFAGFKG 1035


>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = -1

Query: 217 DGIGMLTPDLAIKVAEKL*LGVNPPSAYQIRFTGYKG 107
           DGIGM++ DLAI+VAEKL L VNPPSAYQIR+ G KG
Sbjct: 588 DGIGMISADLAIEVAEKLHLSVNPPSAYQIRYAGCKG 624