BLASTX nr result

ID: Cimicifuga21_contig00015685 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015685
         (213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589867.1| hypothetical protein MTR_1g040620 [Medicago ...    70   1e-10
gb|AAT38794.1| Putative hAT family dimerisation domain containin...    60   1e-07
gb|AAF82236.1|AC069143_12 Contains similarity to a transposable ...    59   3e-07
ref|NP_173360.1| TTF-type zinc finger protein with HAT dimerizat...    59   3e-07
dbj|BAB02591.1| unnamed protein product [Arabidopsis thaliana]         57   1e-06

>ref|XP_003589867.1| hypothetical protein MTR_1g040620 [Medicago truncatula]
           gi|355478915|gb|AES60118.1| hypothetical protein
           MTR_1g040620 [Medicago truncatula]
          Length = 665

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/70 (50%), Positives = 45/70 (64%)
 Frame = +2

Query: 2   EVQSTSKRTHKESDRGGGTSSPGVNDVDIPNLVVDPGLRKQILDYHPNERDTIPRAYLLK 181
           EV++T   TH++    G +   G  +VD+ NL  +PG RKQ+  YHPN+RD I RAYL K
Sbjct: 16  EVETTPTPTHEQP---GPSFKNGFLEVDLENLPANPGERKQLSCYHPNDRDEIRRAYLAK 72

Query: 182 GPC*PMNHNF 211
           GPC P  HNF
Sbjct: 73  GPCQPKEHNF 82


>gb|AAT38794.1| Putative hAT family dimerisation domain containing protein,
           identical [Solanum demissum]
          Length = 805

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/63 (47%), Positives = 36/63 (57%)
 Frame = +2

Query: 8   QSTSKRTHKESDRGGGTSSPGVNDVDIPNLVVDPGLRKQILDYHPNERDTIPRAYLLKGP 187
           QS S+   KE+      S     + D+ +L  DPG R  IL+YHPN RD I RAYLL GP
Sbjct: 23  QSHSQSNQKENTNHSEVSLDSSQEFDLSSLKFDPGERTSILNYHPNHRDVIRRAYLLNGP 82

Query: 188 C*P 196
           C P
Sbjct: 83  CQP 85


>gb|AAF82236.1|AC069143_12 Contains similarity to a transposable element Tip100 protein for
           transposase from Ipomoea purpurea gb|4063769 and is a
           member of the transmembrane 4 family PF|00335
           [Arabidopsis thaliana]
          Length = 811

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 25/50 (50%), Positives = 32/50 (64%)
 Frame = +2

Query: 62  SPGVNDVDIPNLVVDPGLRKQILDYHPNERDTIPRAYLLKGPC*PMNHNF 211
           SP   D+++  L  DP  RK IL YHPN+RD + R YL++GPC P  H F
Sbjct: 51  SPPPPDINLNELPSDPAKRKSILSYHPNQRDEVRREYLIRGPCQPRGHKF 100


>ref|NP_173360.1| TTF-type zinc finger protein with HAT dimerization domain
           [Arabidopsis thaliana] gi|332191703|gb|AEE29824.1|
           TTF-type zinc finger protein with HAT dimerization
           domain [Arabidopsis thaliana]
          Length = 769

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 25/50 (50%), Positives = 32/50 (64%)
 Frame = +2

Query: 62  SPGVNDVDIPNLVVDPGLRKQILDYHPNERDTIPRAYLLKGPC*PMNHNF 211
           SP   D+++  L  DP  RK IL YHPN+RD + R YL++GPC P  H F
Sbjct: 9   SPPPPDINLNELPSDPAKRKSILSYHPNQRDEVRREYLIRGPCQPRGHKF 58


>dbj|BAB02591.1| unnamed protein product [Arabidopsis thaliana]
          Length = 571

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/64 (45%), Positives = 38/64 (59%)
 Frame = +2

Query: 20  KRTHKESDRGGGTSSPGVNDVDIPNLVVDPGLRKQILDYHPNERDTIPRAYLLKGPC*PM 199
           KR H+ + +    + P     D+P+   DPG RK ILDYHPNERD + R YL+KGP    
Sbjct: 11  KRKHESTSQDIPENIPEAIPEDLPS---DPGDRKHILDYHPNERDEVRRKYLIKGPYQSR 67

Query: 200 NHNF 211
            H+F
Sbjct: 68  GHDF 71


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