BLASTX nr result

ID: Cimicifuga21_contig00015676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015676
         (1371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519400.1| PREDICTED: uncharacterized protein LOC100785...   254   3e-65
ref|XP_002528301.1| conserved hypothetical protein [Ricinus comm...   249   9e-64
ref|XP_003616656.1| Gibberellin 2-beta-dioxygenase [Medicago tru...   241   3e-61
ref|XP_002311230.1| 2-oxoglutarate-dependent dioxygenase [Populu...   240   7e-61
ref|XP_002272219.1| PREDICTED: gibberellin 2-beta-dioxygenase 1-...   239   9e-61

>ref|XP_003519400.1| PREDICTED: uncharacterized protein LOC100785042 [Glycine max]
          Length = 360

 Score =  254 bits (650), Expect = 3e-65
 Identities = 142/295 (48%), Positives = 178/295 (60%), Gaps = 10/295 (3%)
 Frame = +2

Query: 263  LNSHLSSFTELGFFQLTNHQIXXXXXXXXXXXXXXLFNLSKTLKQQSFSKSWPLGYXXXX 442
            LN  LS  ++LG+ QLT+H +              LF+LS+  KQ  F K+WPLGY    
Sbjct: 68   LNDVLSCVSKLGYAQLTDHSVPSELANSAESEALALFDLSQDQKQSLFPKNWPLGYGNDE 127

Query: 443  XXXXXXXXXXXXX--FCFESTQXXXXXXXEDFTRELEKVGLETVEALSCAMGFDKALKEK 616
                            C   +          F RELEK+GL  V+ L+  +G +  L + 
Sbjct: 128  DEDEDGVADSFRFDSACSTESSELALFSLRKFARELEKLGLMIVDELTKDLGCENPLGDD 187

Query: 617  ETHFSSLMWVSEGVVGNKDPGRFYPYILSLQYQIRCTKYSLLTDSGWGAVSPQIDSVLVT 796
             T   S+MWVSE + GNK  G FYP+++ LQYQIR  KYSLL+DSGW +V P +DS+LVT
Sbjct: 188  PTRVCSVMWVSESLPGNKSGG-FYPFVIGLQYQIRNQKYSLLSDSGWVSVLPHVDSILVT 246

Query: 797  VGDIAQVWSNGKLKKVRGRPVAISGDNDDSRCITMSLLVTLPTDTTVSISPFL-QATCH- 970
             GDIAQVWSNGKLKKVRGRP+A  GD + SRCITMSLL+TLPTD+ V  +P L + TC+ 
Sbjct: 247  FGDIAQVWSNGKLKKVRGRPMATVGDENGSRCITMSLLITLPTDSRV--APLLPKVTCNK 304

Query: 971  ------VGDDSTENKDQETLVEEKLVFDTFSFEDYAWRVYHERFLFKDPLDRYHI 1117
                  +  +  EN D      EK VF++F FEDYAWRVYHER LFKDPLDRY +
Sbjct: 305  DQKEEEIEGEEEENNDGGDEELEKRVFNSFDFEDYAWRVYHERILFKDPLDRYRV 359


>ref|XP_002528301.1| conserved hypothetical protein [Ricinus communis]
            gi|223532256|gb|EEF34059.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 435

 Score =  249 bits (637), Expect = 9e-64
 Identities = 146/313 (46%), Positives = 185/313 (59%), Gaps = 17/313 (5%)
 Frame = +2

Query: 230  VISFSPQNSEFLNSHLSSFTELGFFQLTNHQIXXXXXXXXXXXXXXLFNLSKTLKQQSFS 409
            +IS S Q S   +  LS+ ++ GFFQL  H I              LF L+K  K+  F 
Sbjct: 124  LISLSDQTSA--DHLLSACSQHGFFQLHKHNIPSHLANSAEVESLSLFKLAKDKKESYFP 181

Query: 410  KSWPLGYXXXXXXXXXXXXXXXXXFCFESTQXXXXXXXE---DFTRELEKVGLETVEALS 580
            K+WPLG+                  C  ST+           + TR LEK+GLE +E LS
Sbjct: 182  KNWPLGFNDDDEEGNGESFWLDGD-CSASTELPTELSLSSLRELTRGLEKLGLEAMEMLS 240

Query: 581  CAMGFDKALKEKETHFSSLMWVSEGVVGNKDP---GRFYPYILSLQYQIRCTKYSLLTDS 751
             A+GF+   K   T  SS+M V EG  G+K     G FYPY++ LQY+IR  KY LL DS
Sbjct: 241  KAVGFENPFKAYPTRLSSMMSVHEGSYGDKPDHISGGFYPYVVGLQYEIRSRKYWLLADS 300

Query: 752  GWGAVSPQIDSVLVTVGDIAQVWSNGKLKKVRGRPVAISGDNDDSRCITMSLLVTLPTDT 931
            GW AV PQ+DSVLVTVGDIAQVWSNGKLK+VRGRP+   GD  DS CITM+LL+TLPT+T
Sbjct: 301  GWVAVVPQVDSVLVTVGDIAQVWSNGKLKRVRGRPLPCMGDGKDSSCITMTLLLTLPTET 360

Query: 932  TVS-ISPFLQATCHVGDDSTENKDQE----------TLVEEKLVFDTFSFEDYAWRVYHE 1078
            T+S + P L       D+  E +++E           + +EK +F++FSFEDYAWRVYHE
Sbjct: 361  TISPLLPELDTHNSADDEVREEEEEEEEEDEKDGKNVVKKEKRMFNSFSFEDYAWRVYHE 420

Query: 1079 RFLFKDPLDRYHI 1117
             F+FKDPLD+Y I
Sbjct: 421  PFIFKDPLDKYRI 433


>ref|XP_003616656.1| Gibberellin 2-beta-dioxygenase [Medicago truncatula]
            gi|355517991|gb|AES99614.1| Gibberellin
            2-beta-dioxygenase [Medicago truncatula]
          Length = 379

 Score =  241 bits (615), Expect = 3e-61
 Identities = 137/307 (44%), Positives = 181/307 (58%), Gaps = 12/307 (3%)
 Frame = +2

Query: 233  ISFSPQNSEFLNSHLSSFTELGFFQLTNHQIXXXXXXXXXXXXXXLFNLSKTLKQQSFSK 412
            +SFS    E L   +SS ++LGF QLT+H +              LFNLS   K+  F +
Sbjct: 76   LSFSSLTPEKL---ISSISQLGFIQLTDHSVSSKLANLAESESLKLFNLSHDQKESFFPQ 132

Query: 413  SWPLGYXXXXXXXXXXXXXXXXX----FCFESTQXXXXXXXEDFTRELEKVGLETVEALS 580
            +WP GY                      C   +         +F   LEK+GL  ++ L 
Sbjct: 133  NWPFGYEGDNDNDEEKLVESFRFQFDSLCSTESNQIKLESLSEFACALEKLGLNIIDVLM 192

Query: 581  CAMGFDKALKEKETHFSSLMWVSEGVVGNK--DPGRFYPYILSLQYQIRCTKYSLLTDSG 754
              +G +  + +    FSS+MWVSE + GNK    G FYP+I+ LQYQIRC KYSLL+DSG
Sbjct: 193  NGLGVENPVGDDSNRFSSIMWVSECLPGNKPGSMGGFYPFIVGLQYQIRCQKYSLLSDSG 252

Query: 755  -WGAVSPQIDSVLVTVGDIAQVWSNGKLKKVRGRPV-AISGDNDDSRCITMSLLVTLPTD 928
             W +V P +DS+LVTVGD+AQVWSNGKLKKVRGRP+ A  GD +DS CITMSLL+TLP +
Sbjct: 253  GWVSVLPHVDSILVTVGDVAQVWSNGKLKKVRGRPIMAALGDENDSSCITMSLLITLPLE 312

Query: 929  TTVSISPFLQ-ATCHVGDDSTENKDQETLV---EEKLVFDTFSFEDYAWRVYHERFLFKD 1096
            +  +++P L     +  +D  +N ++E  +    +K VF++  FEDYAWRVYHER LFKD
Sbjct: 313  S--NVAPLLPIGNKNKVEDDIDNDEEENNIGGEGQKRVFNSIDFEDYAWRVYHERLLFKD 370

Query: 1097 PLDRYHI 1117
            PLDRY I
Sbjct: 371  PLDRYRI 377


>ref|XP_002311230.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa]
            gi|222851050|gb|EEE88597.1| 2-oxoglutarate-dependent
            dioxygenase [Populus trichocarpa]
          Length = 357

 Score =  240 bits (612), Expect = 7e-61
 Identities = 141/308 (45%), Positives = 180/308 (58%), Gaps = 12/308 (3%)
 Frame = +2

Query: 230  VISFSPQNSEFLNSHLSSFTELGFFQLTNHQIXXXXXXXXXXXXXXLFNLSKTLKQQSFS 409
            +IS S  N + L    SS  + G+FQLTNH I              LF+L+K  K+  F 
Sbjct: 56   LISLSDPNLQDLLFSASS--QRGYFQLTNHNIPSKIATSAELESVSLFDLAKDKKESYFP 113

Query: 410  KSWPLGYXXXXXXXXXXXXXXXXXFCFESTQXXXXXXXEDFTRELEKVGLETVEALSCAM 589
            K+WPLG+                  C   +         + TR LEK+GLE ++ LS   
Sbjct: 114  KNWPLGFEGDEDGNGESFWLDAE--CSTVSTELVLASLRELTRALEKLGLEVIQMLSNGA 171

Query: 590  GFDKALKEKETHFSSLMWVSEGVVGNKDP----GRFYPYILSLQYQIRCTKYSLLTDSGW 757
            GF+  LKE  T   SL+ +  G+ GN D     G  YPYI+ LQYQIRC KYSLLTDSGW
Sbjct: 172  GFENPLKEHPTRNYSLLCLHGGLDGNDDKPGLSGGSYPYIVGLQYQIRCQKYSLLTDSGW 231

Query: 758  GAVSPQIDSVLVTVGDIAQVWSNGKLKKVRGRPVAISGDNDDSRCITMSLLVTLPTDTTV 937
              V PQ+DS++VTVGDIAQVWSNGKLKKVRGRP A  GD ++SRCI+MSLLVTLP+++TV
Sbjct: 232  VTVLPQVDSIMVTVGDIAQVWSNGKLKKVRGRPKACLGDCENSRCISMSLLVTLPSESTV 291

Query: 938  SISPFLQATCHVGDDSTENKDQETLVEEKL--------VFDTFSFEDYAWRVYHERFLFK 1093
              SP L      G ++ E++ +E   ++ +         F +F F+DYAWRVYH   LFK
Sbjct: 292  --SPLLPKVITDGINANEDEIREDEEQDNIHSVCKTGRRFGSFPFDDYAWRVYHGPLLFK 349

Query: 1094 DPLDRYHI 1117
            DPLD+Y I
Sbjct: 350  DPLDKYRI 357


>ref|XP_002272219.1| PREDICTED: gibberellin 2-beta-dioxygenase 1-like [Vitis vinifera]
          Length = 382

 Score =  239 bits (611), Expect = 9e-61
 Identities = 142/321 (44%), Positives = 183/321 (57%), Gaps = 26/321 (8%)
 Frame = +2

Query: 233  ISFSPQNSEFLNSHLSSFTELGFFQLTNHQIXXXXXXXXXXXXXXLFNLSKTLKQQSFSK 412
            ISFS QN   L+  LS  ++ GFFQL +H I              LF+L +  KQ SF K
Sbjct: 66   ISFSDQNLNLLSDLLSFSSQHGFFQLIDHPIPSQLARSAESESLALFDLPRPQKQHSFPK 125

Query: 413  SWPLGYXXXXXXXXXXXXXXXXXFCFEST-----QXXXXXXXEDFTRELEKVGLETVEAL 577
            +WPLG+                 FC ES+              +FTR +EK+GL+ +++L
Sbjct: 126  NWPLGFDADEDEEDGAGEA----FCLESSCSTESTHLSLSSLREFTRAMEKLGLDVLDSL 181

Query: 578  SCAMGFDKALKEKETHFSSLMWVSEGVVGNKDP--GRFYPYILSLQYQIRCTKYSLLTDS 751
            + A+GF+   +        LMW+SE V GNK    GR YPYI+ LQYQI   K+SLL DS
Sbjct: 182  ARAVGFENPFRSGSNRVCPLMWISEDVPGNKPDLSGRVYPYIIGLQYQITSQKHSLLVDS 241

Query: 752  GWGAVSPQIDSVLVTVGDIAQVWSNGKLKKVRGRPVAISGD--NDDSRCITMSLLVTLPT 925
            GW  VSP++DSV+VTVGDIAQVWSNGKLKKVRGR V   G      SR ++M+LL+TLP 
Sbjct: 242  GWITVSPRVDSVMVTVGDIAQVWSNGKLKKVRGRAVVNRGSEAGKSSRSVSMALLLTLPL 301

Query: 926  DT-TVSISPFL--------QATCHVGDDSTE--------NKDQETLVEEKLVFDTFSFED 1054
            DT  VS  P L        +   H  ++ TE         +++E   +E+ +F +FSFED
Sbjct: 302  DTPNVSPLPLLPHLPPADHETQPHKAEEQTEAGSTSGTSKEEEEEEDDERPLFRSFSFED 361

Query: 1055 YAWRVYHERFLFKDPLDRYHI 1117
            YAWR+YHER L KDPLDRY I
Sbjct: 362  YAWRIYHERLLLKDPLDRYRI 382


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