BLASTX nr result

ID: Cimicifuga21_contig00015653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015653
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524078.1| ring finger protein, putative [Ricinus commu...   106   2e-21
ref|XP_002316476.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_002269714.1| PREDICTED: RING-H2 finger protein ATL70-like...   101   5e-20
ref|XP_002323373.1| predicted protein [Populus trichocarpa] gi|2...   101   5e-20
emb|CAN70851.1| hypothetical protein VITISV_030130 [Vitis vinifera]   101   7e-20

>ref|XP_002524078.1| ring finger protein, putative [Ricinus communis]
           gi|223536646|gb|EEF38288.1| ring finger protein,
           putative [Ricinus communis]
          Length = 172

 Score =  106 bits (264), Expect = 2e-21
 Identities = 55/107 (51%), Positives = 72/107 (67%), Gaps = 10/107 (9%)
 Frame = +3

Query: 21  INGIGYFVGISVGVIFLIATIALASYFCKHVLTAPTQPLQSS---------NDSNPSISI 173
           I G GY +G+S+G++ LI TI LASYFC        Q +Q+          +D    I +
Sbjct: 16  IGGFGYGIGVSIGILLLITTITLASYFCTRNHQQQQQSMQTRRRNRSEEPPDDRLQDIVV 75

Query: 174 EIGLDEATLKSYPKLLYSQAKLENKD-IASSCSICLSDYKNSDMLRV 311
           E+G+DEATLK+YPKLLYSQAKL N D  A+ CSICL+DYK++DMLR+
Sbjct: 76  EVGIDEATLKNYPKLLYSQAKLHNTDTTATCCSICLADYKSTDMLRL 122


>ref|XP_002316476.1| predicted protein [Populus trichocarpa] gi|222865516|gb|EEF02647.1|
           predicted protein [Populus trichocarpa]
          Length = 165

 Score =  103 bits (258), Expect = 1e-20
 Identities = 56/103 (54%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
 Frame = +3

Query: 21  INGIGYFVGISVGVIFLIATIALASYFCKHVLTAPTQPLQSSNDS---NPSISIEIGLDE 191
           ING  Y +G+S GV+ LI +I LA+YFC + + +PT    +  DS   + SI +E+GLDE
Sbjct: 13  INGYAYAIGMSSGVLVLIISITLAAYFCTYGVDSPTHTGTNQGDSITDHDSIVMELGLDE 72

Query: 192 ATLKSYPKLLYSQAKLE---NKDIASSCSICLSDYKNSDMLRV 311
           ATL SYPKLLYS+A+LE   N  + S CSICL DYK+SDMLR+
Sbjct: 73  ATLASYPKLLYSKARLEPRGNDLLPSCCSICLGDYKDSDMLRL 115


>ref|XP_002269714.1| PREDICTED: RING-H2 finger protein ATL70-like [Vitis vinifera]
          Length = 169

 Score =  101 bits (252), Expect = 5e-20
 Identities = 51/107 (47%), Positives = 71/107 (66%), Gaps = 7/107 (6%)
 Frame = +3

Query: 12  TERINGIGYFVGISVGVIFLIATIALASYFCKHVLTAPTQPLQSSN---DSNPSIS---I 173
           +  I G+GY +G+SVG++ LI TI LASYFC      P           +  P +    +
Sbjct: 13  SNNIGGLGYGIGVSVGILLLITTITLASYFCTRPQQVPAAAYGGGGGLREQQPVVEEFVV 72

Query: 174 EIGLDEATLKSYPKLLYSQAKLENKD-IASSCSICLSDYKNSDMLRV 311
           ++GLDEAT+ SYPK++YS+AKL++KD  A+ CSICL+DYK SDMLR+
Sbjct: 73  DVGLDEATILSYPKMVYSEAKLQHKDSTAACCSICLADYKGSDMLRL 119


>ref|XP_002323373.1| predicted protein [Populus trichocarpa] gi|222868003|gb|EEF05134.1|
           predicted protein [Populus trichocarpa]
          Length = 154

 Score =  101 bits (252), Expect = 5e-20
 Identities = 54/105 (51%), Positives = 72/105 (68%), Gaps = 5/105 (4%)
 Frame = +3

Query: 12  TERINGIGYFVGISVGVIFLIATIALASYFC--KHVLTAPTQPLQSSND--SNPSISIEI 179
           +  I G GY +G+S+G++ LI TI LASYFC      + P+Q   S++   +  S  +EI
Sbjct: 4   SNNIGGFGYGIGVSIGILLLITTITLASYFCARNQQTSVPSQGRNSADQQLNLQSFVVEI 63

Query: 180 GLDEATLKSYPKLLYSQAKLENKDIASS-CSICLSDYKNSDMLRV 311
           GLDEATLKSYP LLYS+AKL   D  S+ CSICL+DYK++D LR+
Sbjct: 64  GLDEATLKSYPTLLYSEAKLHKTDSTSTCCSICLADYKSTDKLRL 108


>emb|CAN70851.1| hypothetical protein VITISV_030130 [Vitis vinifera]
          Length = 275

 Score =  101 bits (251), Expect = 7e-20
 Identities = 51/106 (48%), Positives = 70/106 (66%), Gaps = 6/106 (5%)
 Frame = +3

Query: 12  TERINGIGYFVGISVGVIFLIATIALASYFCKHVLTAPTQP-----LQSSNDSNPSISIE 176
           +  I G+GY +G+SVG++ LI TI LASYFC      P        L+          ++
Sbjct: 13  SNNIGGLGYGIGVSVGILLLITTITLASYFCTRPQQVPAAAYGGGGLRLQQPVVEEFVVD 72

Query: 177 IGLDEATLKSYPKLLYSQAKLENKD-IASSCSICLSDYKNSDMLRV 311
           +GLDEAT+ SYPK++YS+AKL++KD  A+ CSICL+DYK SDMLR+
Sbjct: 73  VGLDEATILSYPKMVYSEAKLQHKDSTAACCSICLADYKGSDMLRL 118


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