BLASTX nr result

ID: Cimicifuga21_contig00015639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015639
         (886 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521826.1| axonemal dynein light chain, putative [Ricin...   185   1e-44
emb|CBI15303.3| unnamed protein product [Vitis vinifera]              184   2e-44
ref|XP_002266193.1| PREDICTED: uncharacterized protein LOC100263...   184   2e-44
ref|NP_001241239.1| uncharacterized protein LOC100800184 [Glycin...   182   9e-44
ref|XP_003622389.1| Dynein light chain [Medicago truncatula] gi|...   179   6e-43

>ref|XP_002521826.1| axonemal dynein light chain, putative [Ricinus communis]
           gi|223539039|gb|EEF40636.1| axonemal dynein light chain,
           putative [Ricinus communis]
          Length = 303

 Score =  185 bits (470), Expect = 1e-44
 Identities = 90/123 (73%), Positives = 104/123 (84%), Gaps = 1/123 (0%)
 Frame = +3

Query: 519 RPSISLISSVGG-RRKSFCDSKIELKEFFSSVSARIVAVDMPPFMQIHAVSCARKAQDSL 695
           R ++SL   VGG RR+S C S++EL +F ++  A+IV+VDMPPFMQIHAV CARK  DSL
Sbjct: 179 RMTVSLDGGVGGGRRRSLCGSQVELADFLANNGAKIVSVDMPPFMQIHAVDCARKTHDSL 238

Query: 696 EKPSSKILACTLKKEFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSIDHKLYFLLFKTT 875
           EK +SK LA TLKKEFDG+YGPAWHCIVGTSFGSFVTHSVGGFLYFS+D KLY LLFKTT
Sbjct: 239 EKFTSKTLALTLKKEFDGIYGPAWHCIVGTSFGSFVTHSVGGFLYFSMDQKLYVLLFKTT 298

Query: 876 VQK 884
           VQ+
Sbjct: 299 VQR 301


>emb|CBI15303.3| unnamed protein product [Vitis vinifera]
          Length = 309

 Score =  184 bits (467), Expect = 2e-44
 Identities = 89/122 (72%), Positives = 101/122 (82%)
 Frame = +3

Query: 519 RPSISLISSVGGRRKSFCDSKIELKEFFSSVSARIVAVDMPPFMQIHAVSCARKAQDSLE 698
           RPS SL     GRR+SFC S++EL  F +S   ++V+VDMPPFMQIHAV CAR A DSLE
Sbjct: 191 RPSFSL-----GRRRSFCCSQVELAGFLASTGVKVVSVDMPPFMQIHAVDCARNAYDSLE 245

Query: 699 KPSSKILACTLKKEFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSIDHKLYFLLFKTTV 878
           K +SK LA TLKKEFDGVYGPAWHCIVGTSFGSFVTHSVGGF+YF++DHKLY LLFKT V
Sbjct: 246 KFTSKTLAMTLKKEFDGVYGPAWHCIVGTSFGSFVTHSVGGFMYFAMDHKLYILLFKTAV 305

Query: 879 QK 884
           Q+
Sbjct: 306 QR 307


>ref|XP_002266193.1| PREDICTED: uncharacterized protein LOC100263952 [Vitis vinifera]
           gi|147821090|emb|CAN75380.1| hypothetical protein
           VITISV_027595 [Vitis vinifera]
          Length = 272

 Score =  184 bits (467), Expect = 2e-44
 Identities = 89/122 (72%), Positives = 101/122 (82%)
 Frame = +3

Query: 519 RPSISLISSVGGRRKSFCDSKIELKEFFSSVSARIVAVDMPPFMQIHAVSCARKAQDSLE 698
           RPS SL     GRR+SFC S++EL  F +S   ++V+VDMPPFMQIHAV CAR A DSLE
Sbjct: 154 RPSFSL-----GRRRSFCCSQVELAGFLASTGVKVVSVDMPPFMQIHAVDCARNAYDSLE 208

Query: 699 KPSSKILACTLKKEFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSIDHKLYFLLFKTTV 878
           K +SK LA TLKKEFDGVYGPAWHCIVGTSFGSFVTHSVGGF+YF++DHKLY LLFKT V
Sbjct: 209 KFTSKTLAMTLKKEFDGVYGPAWHCIVGTSFGSFVTHSVGGFMYFAMDHKLYILLFKTAV 268

Query: 879 QK 884
           Q+
Sbjct: 269 QR 270


>ref|NP_001241239.1| uncharacterized protein LOC100800184 [Glycine max]
           gi|255647301|gb|ACU24117.1| unknown [Glycine max]
          Length = 259

 Score =  182 bits (462), Expect = 9e-44
 Identities = 87/122 (71%), Positives = 103/122 (84%)
 Frame = +3

Query: 519 RPSISLISSVGGRRKSFCDSKIELKEFFSSVSARIVAVDMPPFMQIHAVSCARKAQDSLE 698
           R S+S ++  GGRR+SFC ++  L++ F+   A++V+VDMPPFMQIHAV CARKA DS+E
Sbjct: 136 RMSVSSLAPGGGRRRSFCGTQANLRDVFAINGAKMVSVDMPPFMQIHAVDCARKAIDSME 195

Query: 699 KPSSKILACTLKKEFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSIDHKLYFLLFKTTV 878
           K +SK LA +LKKEFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFS+D KLY LLFKT V
Sbjct: 196 KFTSKTLALSLKKEFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSMDQKLYILLFKTAV 255

Query: 879 QK 884
           QK
Sbjct: 256 QK 257


>ref|XP_003622389.1| Dynein light chain [Medicago truncatula]
           gi|355497404|gb|AES78607.1| Dynein light chain [Medicago
           truncatula]
          Length = 307

 Score =  179 bits (455), Expect = 6e-43
 Identities = 89/123 (72%), Positives = 102/123 (82%), Gaps = 1/123 (0%)
 Frame = +3

Query: 519 RPSISL-ISSVGGRRKSFCDSKIELKEFFSSVSARIVAVDMPPFMQIHAVSCARKAQDSL 695
           R S+S+  S  GGRRKS C S I+L +FF+   A++V+ DMPPFMQIHAV CARKA DS+
Sbjct: 183 RVSVSMGQSGGGGRRKSLCGSMIDLGDFFAINGAKMVSADMPPFMQIHAVDCARKAFDSM 242

Query: 696 EKPSSKILACTLKKEFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSIDHKLYFLLFKTT 875
           EK +SK LA +LKKEFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFS+D KLY L+FKT 
Sbjct: 243 EKFTSKTLALSLKKEFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSMDQKLYILIFKTA 302

Query: 876 VQK 884
           VQK
Sbjct: 303 VQK 305


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