BLASTX nr result

ID: Cimicifuga21_contig00015629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015629
         (797 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547836.1| PREDICTED: COBW domain-containing protein 2-...   312   5e-83
ref|XP_002264766.1| PREDICTED: COBW domain-containing protein 2 ...   302   6e-80
ref|XP_002326575.1| predicted protein [Populus trichocarpa] gi|2...   297   2e-78
ref|XP_004146192.1| PREDICTED: COBW domain-containing protein 2-...   295   6e-78
ref|XP_002870004.1| predicted protein [Arabidopsis lyrata subsp....   289   4e-76

>ref|XP_003547836.1| PREDICTED: COBW domain-containing protein 2-like [Glycine max]
          Length = 424

 Score =  312 bits (800), Expect = 5e-83
 Identities = 165/242 (68%), Positives = 191/242 (78%), Gaps = 4/242 (1%)
 Frame = +1

Query: 82  MATKFLIARRSFRTLNETLLKPSTSSIDSPFVSSHPVSQCLRTLHSFVSRQSNP----NP 249
           MAT+++  R S +TL   L          P   S      +RTLHSFV+R S+P    N 
Sbjct: 1   MATRYMTLRTSAKTLFHHL--------QPPVQDSRCAFHLIRTLHSFVARDSDPRKFRNS 52

Query: 250 IQPFNSKGMVTASSPRCQGEVVDATAPSVDNRVPATVITGFLGSGKTTLLNHILTSQHGK 429
                 +GMV+A +P       +A + ++DNRVPATVITGFLGSGKTTLLNHILTSQHGK
Sbjct: 53  FFSGTFRGMVSAPNPNFD----EAASLALDNRVPATVITGFLGSGKTTLLNHILTSQHGK 108

Query: 430 RIAVIENEYGEVDIDGSLVASHSSVADDIVMVNNGCLCCTVRGDLVKMLLELAKKKRDKF 609
           RIAVIENE+GEVDIDGSLVASHSS +++I+MVNNGCLCCTVRGDLVKMLLEL +KKRDKF
Sbjct: 109 RIAVIENEFGEVDIDGSLVASHSSASEEIIMVNNGCLCCTVRGDLVKMLLELVRKKRDKF 168

Query: 610 DHIVIETTGLAKPAPVIETFSTDELVAKYVKLDGVVTLIDCKHAMQHLNEVKPRFVVNEA 789
           DHIVIETTGLAKPAPVIETF +DELV+++VKLDGVVTL+DCKHAM+HLNEVKPRFVVNEA
Sbjct: 169 DHIVIETTGLAKPAPVIETFCSDELVSQHVKLDGVVTLVDCKHAMKHLNEVKPRFVVNEA 228

Query: 790 VE 795
           VE
Sbjct: 229 VE 230


>ref|XP_002264766.1| PREDICTED: COBW domain-containing protein 2 [Vitis vinifera]
           gi|296088399|emb|CBI37390.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score =  302 bits (773), Expect = 6e-80
 Identities = 163/227 (71%), Positives = 180/227 (79%), Gaps = 1/227 (0%)
 Frame = +1

Query: 118 RTLNETLLKPSTSSIDSPFV-SSHPVSQCLRTLHSFVSRQSNPNPIQPFNSKGMVTASSP 294
           R L+ T  K    ++   F  SS  + Q LR  H   S   +       NS+GMV A + 
Sbjct: 4   RLLSRTTTKSLCKTLHHHFQHSSSCLVQLLRNAHVLGSSPFDSTKFLYRNSRGMVCAPN- 62

Query: 295 RCQGEVVDATAPSVDNRVPATVITGFLGSGKTTLLNHILTSQHGKRIAVIENEYGEVDID 474
                  D ++ ++DNRVPATVITGFLGSGKTTLLNHILTSQHGKRIAVIENE+GEVDID
Sbjct: 63  ------YDISSLNLDNRVPATVITGFLGSGKTTLLNHILTSQHGKRIAVIENEFGEVDID 116

Query: 475 GSLVASHSSVADDIVMVNNGCLCCTVRGDLVKMLLELAKKKRDKFDHIVIETTGLAKPAP 654
           GSLVASHSSVA+DIVMVNNGCLCCTVRGDLVKMLLEL KKKRDKFDHIVIETTGLAKPAP
Sbjct: 117 GSLVASHSSVAEDIVMVNNGCLCCTVRGDLVKMLLELVKKKRDKFDHIVIETTGLAKPAP 176

Query: 655 VIETFSTDELVAKYVKLDGVVTLIDCKHAMQHLNEVKPRFVVNEAVE 795
           VIETF TDELV++YVKLDGVVTL+D KHAMQHL+EVKPRFVVNEAVE
Sbjct: 177 VIETFCTDELVSRYVKLDGVVTLVDAKHAMQHLDEVKPRFVVNEAVE 223


>ref|XP_002326575.1| predicted protein [Populus trichocarpa] gi|222833897|gb|EEE72374.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score =  297 bits (761), Expect = 2e-78
 Identities = 157/235 (66%), Positives = 179/235 (76%)
 Frame = +1

Query: 91  KFLIARRSFRTLNETLLKPSTSSIDSPFVSSHPVSQCLRTLHSFVSRQSNPNPIQPFNSK 270
           KFL++R S + L + L   S +    P           R +HS  SRQ        F+S 
Sbjct: 5   KFLVSRTSPKNLYQLLQNTSLNPSYFP-----------RNIHSLFSRQ--------FHSS 45

Query: 271 GMVTASSPRCQGEVVDATAPSVDNRVPATVITGFLGSGKTTLLNHILTSQHGKRIAVIEN 450
              T SS   + +   A+AP  + RVPATVITGFLGSGKTTLLNHILTSQHGKRIAVIEN
Sbjct: 46  QTATFSSSSLEPQQTSASAPGPNTRVPATVITGFLGSGKTTLLNHILTSQHGKRIAVIEN 105

Query: 451 EYGEVDIDGSLVASHSSVADDIVMVNNGCLCCTVRGDLVKMLLELAKKKRDKFDHIVIET 630
           E+GEVDIDGSLVASHS+ +DDI+MVNNGCLCCTVRGDLVKMLLELAKK RDKFDHIVIET
Sbjct: 106 EFGEVDIDGSLVASHSTASDDIIMVNNGCLCCTVRGDLVKMLLELAKKNRDKFDHIVIET 165

Query: 631 TGLAKPAPVIETFSTDELVAKYVKLDGVVTLIDCKHAMQHLNEVKPRFVVNEAVE 795
           TGLAKP PVIETF +DELV++YVKLDGVVT++D KH +QHLNE+KPRFVVNEAVE
Sbjct: 166 TGLAKPGPVIETFCSDELVSRYVKLDGVVTMVDSKHVLQHLNELKPRFVVNEAVE 220


>ref|XP_004146192.1| PREDICTED: COBW domain-containing protein 2-like [Cucumis sativus]
           gi|449512950|ref|XP_004164186.1| PREDICTED: COBW
           domain-containing protein 2-like [Cucumis sativus]
          Length = 424

 Score =  295 bits (756), Expect = 6e-78
 Identities = 171/242 (70%), Positives = 183/242 (75%), Gaps = 4/242 (1%)
 Frame = +1

Query: 82  MATKFLIARRSFRTLNETLLKPSTSSIDSPFVSSHPVSQCLRTLHSFVSRQSN----PNP 249
           MAT FLI R S R L +  L   +SS  S        S  LR L S + R S     PN 
Sbjct: 1   MATTFLIRRTSPRYLFQPPLHYFSSSSSS--------SPLLRNLCSLLFRDSTSCNRPNS 52

Query: 250 IQPFNSKGMVTASSPRCQGEVVDATAPSVDNRVPATVITGFLGSGKTTLLNHILTSQHGK 429
             P  ++  V  S P   G    + A   D RVPATVITGFLGSGKTTLLNHILTSQHGK
Sbjct: 53  C-PSYTRSFV--SLPEGSG----SPALGSDTRVPATVITGFLGSGKTTLLNHILTSQHGK 105

Query: 430 RIAVIENEYGEVDIDGSLVASHSSVADDIVMVNNGCLCCTVRGDLVKMLLELAKKKRDKF 609
           RIAVIENE+GEVDIDGSLVASHSSVA++IVMVNNGCLCCTVRGDLVKMLLEL KKKRDKF
Sbjct: 106 RIAVIENEFGEVDIDGSLVASHSSVAEEIVMVNNGCLCCTVRGDLVKMLLELVKKKRDKF 165

Query: 610 DHIVIETTGLAKPAPVIETFSTDELVAKYVKLDGVVTLIDCKHAMQHLNEVKPRFVVNEA 789
           DHIVIETTGLAKP PVIETF TDELV++YVKLDGVVTL+D KHAMQHLNEVKPRFVVNEA
Sbjct: 166 DHIVIETTGLAKPGPVIETFCTDELVSRYVKLDGVVTLVDSKHAMQHLNEVKPRFVVNEA 225

Query: 790 VE 795
           VE
Sbjct: 226 VE 227


>ref|XP_002870004.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297315840|gb|EFH46263.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 414

 Score =  289 bits (740), Expect = 4e-76
 Identities = 162/239 (67%), Positives = 184/239 (76%), Gaps = 1/239 (0%)
 Frame = +1

Query: 82  MATKFLIARRSFRTLNETLLKPSTSSIDSPFVSSHPVSQCLRTLHSFVSRQSNPNPIQPF 261
           MAT+FLI+R            P T S  S F+ S+ +S  L    SF SR+SN +  +PF
Sbjct: 1   MATRFLISR------------PGTVS-SSRFLLSNRLSSFL---DSFTSRESNSS--KPF 42

Query: 262 NSKGMVTASSPRCQGEVVDATAP-SVDNRVPATVITGFLGSGKTTLLNHILTSQHGKRIA 438
               + T SS    G   D  A  + D R+PATVITGFLGSGKTTLLNHILTS HGKRIA
Sbjct: 43  ----LKTFSSVPSSGIEQDVAASLNQDTRIPATVITGFLGSGKTTLLNHILTSNHGKRIA 98

Query: 439 VIENEYGEVDIDGSLVASHSSVADDIVMVNNGCLCCTVRGDLVKMLLELAKKKRDKFDHI 618
           VIENE+GEVDIDGSLVASHSS +DDI+MVNNGCLCCTVRGDLVKMLL+L K KRDKFDHI
Sbjct: 99  VIENEFGEVDIDGSLVASHSSSSDDIIMVNNGCLCCTVRGDLVKMLLDLVKNKRDKFDHI 158

Query: 619 VIETTGLAKPAPVIETFSTDELVAKYVKLDGVVTLIDCKHAMQHLNEVKPRFVVNEAVE 795
           VIETTGLAKP PVIETF++DEL+ +Y+KLDGVVTL+D KHAM+HLNEVKPRFVVNEAVE
Sbjct: 159 VIETTGLAKPGPVIETFNSDELLPRYIKLDGVVTLVDSKHAMRHLNEVKPRFVVNEAVE 217


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