BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015621
         (1464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263215.1| PREDICTED: RING-H2 finger protein ATL60-like...   283   1e-73
emb|CAN79606.1| hypothetical protein VITISV_027500 [Vitis vinifera]   276   1e-71
ref|XP_003529860.1| PREDICTED: RING-H2 finger protein ATL3-like ...   240   6e-61
ref|XP_003548383.1| PREDICTED: RING-H2 finger protein ATL3-like ...   235   2e-59
ref|XP_003627467.1| RING-H2 finger protein ATL3C [Medicago trunc...   230   6e-58

>ref|XP_002263215.1| PREDICTED: RING-H2 finger protein ATL60-like [Vitis vinifera]
          Length = 304

 Score =  283 bits (723), Expect = 1e-73
 Identities = 157/317 (49%), Positives = 198/317 (62%), Gaps = 9/317 (2%)
 Frame = +1

Query: 205  MGDTIDTTGVASGSLEEISGKVMVAAXXXXXXXXXXXXXXHLYARWFWSRRGIENHSLSM 384
            MGD+ D++ +   +  E+SGK+MV A              HLYA+WFW R      S   
Sbjct: 1    MGDSFDSSSLDDSAAVELSGKIMVVAIIVLFFVVVFVLFLHLYAKWFWWRTADRGSSFGG 60

Query: 385  TSRRRR-FVFSPSQDPAV-ALHRGLEPSLVRALPVVIFRPDDFKEGLECAVCLSELAEGD 558
            + RRRR FVF+P QDPA+ A+ RGL+PS++ ++PV++FRP++FK+GLECAVCLSEL  G+
Sbjct: 61   SRRRRRRFVFAPGQDPALPAMRRGLDPSILGSIPVLVFRPEEFKDGLECAVCLSELVTGE 120

Query: 559  KARLLPKCNHGFHVECIDMWFQSHSTCPLCRNTVGLDSKD----SSAETQSLEGVSGSV- 723
            KARLLPKCNHGFHVECIDMWFQSHSTCPLCRN V     D     S E+  L   S +  
Sbjct: 121  KARLLPKCNHGFHVECIDMWFQSHSTCPLCRNLVATVLSDPTTPQSPESIQLSDESSAAG 180

Query: 724  -QSIESPNFPTNVLFWGNQTQVSARTIGVEEEGXXXXXXXXXXXXXXXXXXXXXQDGALV 900
              S+ESPN+PTN+LFWGNQT+V++  + +EE                        DG LV
Sbjct: 181  DYSLESPNYPTNILFWGNQTRVTSAGLCLEE--------GAASSQPPCASPGNGPDGMLV 232

Query: 901  IDIPR-LIDGFSSLSPSASRFAEDEMKSPISSPMATXXXXXXXXXXXEKRVIPSSPSSID 1077
            IDIPR   + FSSLSPS    +E+E+K    SPM T           EKRV+P SP S+D
Sbjct: 233  IDIPRQTAENFSSLSPSTGGTSEEELK----SPMTTRLRSLKRLLSREKRVVPCSPGSVD 288

Query: 1078 VEQGEGGRGQSSKTSPD 1128
            VEQ  GGRGQSSK++ D
Sbjct: 289  VEQ--GGRGQSSKSTLD 303


>emb|CAN79606.1| hypothetical protein VITISV_027500 [Vitis vinifera]
          Length = 959

 Score =  276 bits (706), Expect = 1e-71
 Identities = 153/311 (49%), Positives = 193/311 (62%), Gaps = 9/311 (2%)
 Frame = +1

Query: 205  MGDTIDTTGVASGSLEEISGKVMVAAXXXXXXXXXXXXXXHLYARWFWSRRGIENHSLSM 384
            MGD+ D++ +   +  E+SGK+MV A              HLYA+WFW R      S   
Sbjct: 1    MGDSFDSSSLDDSAAVELSGKIMVVAIIVLFFVVVFVLFLHLYAKWFWWRTADRGSSFGG 60

Query: 385  TSRRRR-FVFSPSQDPAV-ALHRGLEPSLVRALPVVIFRPDDFKEGLECAVCLSELAEGD 558
            + RRRR FVF+P QDPA+ A+ RGL+PS++ ++PV++FRP++FK+GLECAVCLSEL  G+
Sbjct: 61   SRRRRRRFVFAPGQDPALPAMRRGLDPSILGSIPVLVFRPEEFKDGLECAVCLSELVTGE 120

Query: 559  KARLLPKCNHGFHVECIDMWFQSHSTCPLCRNTVGLDSKD----SSAETQSLEGVSGSV- 723
            KARLLPKCNHGFHVECIDMWFQSHSTCPLCRN V     D     S E+  L   S +  
Sbjct: 121  KARLLPKCNHGFHVECIDMWFQSHSTCPLCRNLVATVLSDPTTPQSPESIQLSDESSAAG 180

Query: 724  -QSIESPNFPTNVLFWGNQTQVSARTIGVEEEGXXXXXXXXXXXXXXXXXXXXXQDGALV 900
              S+ESPN+PTN+LFWGNQT+V++  + +EE                        DG LV
Sbjct: 181  DYSLESPNYPTNILFWGNQTRVTSAGLCLEE--------GAASSQPPCASPGNGPDGMLV 232

Query: 901  IDIPR-LIDGFSSLSPSASRFAEDEMKSPISSPMATXXXXXXXXXXXEKRVIPSSPSSID 1077
            IDIPR   + FSSLSPS    +E+E+K    SPM T           EKRV+P SP S+D
Sbjct: 233  IDIPRQTAENFSSLSPSTGGTSEEELK----SPMTTRLRSLKRLLSREKRVVPCSPGSVD 288

Query: 1078 VEQGEGGRGQS 1110
            VEQ  GGRGQ+
Sbjct: 289  VEQ--GGRGQN 297


>ref|XP_003529860.1| PREDICTED: RING-H2 finger protein ATL3-like [Glycine max]
          Length = 314

 Score =  240 bits (613), Expect = 6e-61
 Identities = 137/304 (45%), Positives = 172/304 (56%), Gaps = 24/304 (7%)
 Frame = +1

Query: 253  EISGKVMVAAXXXXXXXXXXXXXXHLYARWFW--SRRGIENHSLSMTSRRRRFVFSPSQD 426
            EI+GK+MV A              HLYA+WFW                RRRRFVF+P QD
Sbjct: 15   EITGKIMVVAIIFLFMVVVFVLVLHLYAKWFWWSMEENATPQPRHRRRRRRRFVFAPGQD 74

Query: 427  PAV-ALHR-GLEPSLVRALPVVIFRPDDFKEGLECAVCLSELAEGDKARLLPKCNHGFHV 600
              +   H+ GL+PS++++LPV++F+P+DFKEGLECAVCLSE+ +G+K RLLPKCNHGFHV
Sbjct: 75   SVIYETHQVGLDPSVLKSLPVLVFQPEDFKEGLECAVCLSEIVQGEKLRLLPKCNHGFHV 134

Query: 601  ECIDMWFQSHSTCPLCRNTVGLDSK---------DSSAETQSLEGVSGSVQSIESPNFPT 753
            +CIDMWF SHSTCPLCRN V  +S          +S + + S E  SG V  +E  NFPT
Sbjct: 135  DCIDMWFHSHSTCPLCRNPVAFESSKCEESNVSGNSDSSSSSYEENSGGVSGLEPSNFPT 194

Query: 754  NVLFWGNQTQVSARTIGVEEEGXXXXXXXXXXXXXXXXXXXXXQD-----------GALV 900
            NVL WGNQTQVS+  + +EE+                                   G LV
Sbjct: 195  NVLVWGNQTQVSSIGVSLEEKEEEEEEGTSQSQQPPCSTPPTASSSASSNVNGRCHGMLV 254

Query: 901  IDIPRLIDGFSSLSPSASRFAEDEMKSPISSPMATXXXXXXXXXXXEKRVIPSSPSSIDV 1080
            IDIP      SSLSPS SR AE+E+K    SPMA            +K++ P SPSS+DV
Sbjct: 255  IDIPSECTS-SSLSPSGSRCAEEEVK----SPMAATLRSFKRLLSRDKKLSPCSPSSVDV 309

Query: 1081 EQGE 1092
            EQ +
Sbjct: 310  EQAQ 313


>ref|XP_003548383.1| PREDICTED: RING-H2 finger protein ATL3-like [Glycine max]
          Length = 319

 Score =  235 bits (600), Expect = 2e-59
 Identities = 144/322 (44%), Positives = 180/322 (55%), Gaps = 31/322 (9%)
 Frame = +1

Query: 220  DTTGVASGSLEEISGKVMVAAXXXXXXXXXXXXXXHLYARWFWSRRGIENHSLSMTSRRR 399
            D T   SG++E I+GK+MV A              HLYA+WFW    +E ++     RRR
Sbjct: 5    DDTWGESGTIE-ITGKIMVVAIIFLFMVVVFVLVLHLYAKWFWW--SMEENAAPQPRRRR 61

Query: 400  R---FVFSPSQDPAV-ALHR-GLEPSLVRALPVVIFRPDDFKEGLECAVCLSELAEGDKA 564
            R   FVF+P QDP +   H+ GL+PS++++L V++F+P++FKEGLECAVCLSE+ EG+K 
Sbjct: 62   RRRRFVFAPGQDPVIYETHQVGLDPSVLKSLAVLVFQPEEFKEGLECAVCLSEIVEGEKL 121

Query: 565  RLLPKCNHGFHVECIDMWFQSHSTCPLCRNTVGLDSK----------DSSAETQSLEGVS 714
            RLLPKCNHGFHV+CIDMWF SHSTCPLCRN V  +S            S   + S E  S
Sbjct: 122  RLLPKCNHGFHVDCIDMWFHSHSTCPLCRNPVTFESSKIEENNNVLGSSEDSSSSHEENS 181

Query: 715  GSVQSIESPNFPTNVLFWGNQTQVSARTIGVE-------EEGXXXXXXXXXXXXXXXXXX 873
            G    +E  NFPTNVL WGNQTQVS+  + +E       E+G                  
Sbjct: 182  GGGSGLEPSNFPTNVLVWGNQTQVSSFGVSLEDSLEEKQEQGTSQCQQPPPCSPSPTPSS 241

Query: 874  XXXQ---------DGALVIDIPRLIDGFSSLSPSASRFAEDEMKSPISSPMATXXXXXXX 1026
                          G LVIDIP      SSLSPS SR AEDE+K    SPMA        
Sbjct: 242  SSSSARGNVNGRCHGMLVIDIPNECTS-SSLSPSGSRCAEDEVK----SPMAVTLRSFKR 296

Query: 1027 XXXXEKRVIPSSPSSIDVEQGE 1092
                EK++ P SPSS+DVEQ +
Sbjct: 297  LLSREKKLSPCSPSSVDVEQAQ 318


>ref|XP_003627467.1| RING-H2 finger protein ATL3C [Medicago truncatula]
            gi|355521489|gb|AET01943.1| RING-H2 finger protein ATL3C
            [Medicago truncatula]
          Length = 321

 Score =  230 bits (587), Expect = 6e-58
 Identities = 135/303 (44%), Positives = 176/303 (58%), Gaps = 23/303 (7%)
 Frame = +1

Query: 253  EISGKVMVAAXXXXXXXXXXXXXXHLYARWFWSRRGIENHSLSMTS---RRRRFVFSPSQ 423
            EI+GK+MV A              HLYA+WFW R   E  ++       RRRRFVF+P Q
Sbjct: 24   EITGKIMVLAIIFLFMVVMFVLMLHLYAKWFWWR--FEERTVPQPRNRRRRRRFVFAPGQ 81

Query: 424  DPAV-ALHR-GLEPSLVRALPVVIFRPDDFKEGLECAVCLSELAEGDKARLLPKCNHGFH 597
            DP V   H+ GLE  ++++LPV++F+ +DFK+GLECAVCL ++ EG+K RLLPKCNHGFH
Sbjct: 82   DPVVYGSHQIGLEAKILKSLPVLVFKNEDFKDGLECAVCLCDVVEGEKTRLLPKCNHGFH 141

Query: 598  VECIDMWFQSHSTCPLCRNTVGLDSKDSSAETQSLEGVS----------GSVQSIESPNF 747
            ++CIDMWFQSHSTCPLCRN V ++S   ++ T + E ++            V  +ES NF
Sbjct: 142  LDCIDMWFQSHSTCPLCRNLVSVESCKPNSTTSNGEEMNVLVSSEGENLSHVNGLESSNF 201

Query: 748  PTNVLFWGNQTQVSARTIGVE-EEGXXXXXXXXXXXXXXXXXXXXXQ------DGALVID 906
            PTNVL WGN  +  + + GV  EEG                            +G LVID
Sbjct: 202  PTNVLVWGNSQRQVSSSFGVSLEEGSSHQQPCSTSSSSSTLGSDNGNSGRCNGNGMLVID 261

Query: 907  IPRLID-GFSSLSPSASRFAEDEMKSPISSPMATXXXXXXXXXXXEKRVIPSSPSSIDVE 1083
            IP   D   SSLSPS +R+ EDEMK    SPMA+           +K+  PS+PSS+DVE
Sbjct: 262  IPLPSDFSSSSLSPSDNRYVEDEMK----SPMASRLRSFKRLLSRDKKFSPSTPSSMDVE 317

Query: 1084 QGE 1092
            QG+
Sbjct: 318  QGQ 320