BLASTX nr result

ID: Cimicifuga21_contig00015584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015584
         (756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helica...    74   3e-11
ref|XP_002454319.1| hypothetical protein SORBIDRAFT_04g028590 [S...    72   2e-10
emb|CBI36896.3| unnamed protein product [Vitis vinifera]               70   4e-10
gb|AFW73310.1| hypothetical protein ZEAMMB73_220834 [Zea mays]         67   5e-09
ref|XP_003573127.1| PREDICTED: probable ATP-dependent RNA helica...    67   5e-09

>ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Vitis
           vinifera]
          Length = 1414

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 58/170 (34%), Positives = 84/170 (49%), Gaps = 7/170 (4%)
 Frame = -1

Query: 576 RMDYADAHLNLGSG----SSKGEDSNAILLVGXXXXXXXXXKQDDY---SKRKIPXXXXX 418
           +M+ +  +L   SG    SSKG+DSNAI+L           KQ+     + +        
Sbjct: 79  QMELSLENLEQSSGQDLWSSKGDDSNAIILPEKKGKKRKGMKQEHEKFKTNKTRKLSASQ 138

Query: 417 XXXXXXXXXXXXXXXXXXXSIRILQMYQIREDAHSLLKSSGSIGQVETMREKRKRAAQFS 238
                              SI  L+ Y+IREDA SLL+SS ++GQVET  EKR+RA +FS
Sbjct: 139 KRKLKKLEEEKEKSLLLSKSIETLEKYKIREDAFSLLQSSQNLGQVETTLEKRRRAVRFS 198

Query: 237 KVGLVMPEDDRSSKRRGKEDDFCQTESDVVKSRSKQDRSPDVAPRFMLGE 88
           K GL MP  DR  K    +D   + +S+ ++S+ + D S  + PR +  E
Sbjct: 199 KAGLEMPHSDRPFK---SQDGEMEPDSNKIQSKQEFDESDAMWPRMVQRE 245


>ref|XP_002454319.1| hypothetical protein SORBIDRAFT_04g028590 [Sorghum bicolor]
           gi|241934150|gb|EES07295.1| hypothetical protein
           SORBIDRAFT_04g028590 [Sorghum bicolor]
          Length = 1284

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 39/74 (52%), Positives = 51/74 (68%)
 Frame = -1

Query: 357 IRILQMYQIREDAHSLLKSSGSIGQVETMREKRKRAAQFSKVGLVMPEDDRSSKRRGKED 178
           I +LQ ++I EDAHSLL +SG+IGQ ET++EKR+RA QFSK GL +PE+    K+ G  D
Sbjct: 67  IEVLQKHKISEDAHSLLHASGTIGQAETLKEKRRRAVQFSKAGLDIPEELSLFKKNG--D 124

Query: 177 DFCQTESDVVKSRS 136
                 SDVV+  S
Sbjct: 125 TKVPENSDVVEQVS 138


>emb|CBI36896.3| unnamed protein product [Vitis vinifera]
          Length = 1098

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 38/79 (48%), Positives = 53/79 (67%)
 Frame = -1

Query: 357 IRILQMYQIREDAHSLLKSSGSIGQVETMREKRKRAAQFSKVGLVMPEDDRSSKRRGKED 178
           I  L+ Y+IREDA SLL+SS ++GQVET  EKR+RA +FSK GL MP  DR  K    +D
Sbjct: 80  IETLEKYKIREDAFSLLQSSQNLGQVETTLEKRRRAVRFSKAGLEMPHSDRPFK---SQD 136

Query: 177 DFCQTESDVVKSRSKQDRS 121
              + +S+ ++S+ + D S
Sbjct: 137 GEMEPDSNKIQSKQEFDES 155


>gb|AFW73310.1| hypothetical protein ZEAMMB73_220834 [Zea mays]
          Length = 1287

 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 32/57 (56%), Positives = 44/57 (77%)
 Frame = -1

Query: 357 IRILQMYQIREDAHSLLKSSGSIGQVETMREKRKRAAQFSKVGLVMPEDDRSSKRRG 187
           I +LQ ++I EDA+SLL +SG+IGQ ET++EKR+RA QFSK GL +PE+    K+ G
Sbjct: 67  IEVLQKHKISEDAYSLLHASGTIGQAETLKEKRRRAVQFSKAGLDVPEELSLFKKSG 123


>ref|XP_003573127.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like
           [Brachypodium distachyon]
          Length = 1273

 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 32/72 (44%), Positives = 52/72 (72%)
 Frame = -1

Query: 357 IRILQMYQIREDAHSLLKSSGSIGQVETMREKRKRAAQFSKVGLVMPEDDRSSKRRGKED 178
           I IL+ ++I +DA++LL++SGSIGQ ETM+EKR+RA QFSK GL +PE+    K+  ++ 
Sbjct: 62  IEILRKHRIADDAYALLQTSGSIGQAETMKEKRRRAVQFSKAGLDVPEELSLFKKNCRQK 121

Query: 177 DFCQTESDVVKS 142
           +  +T    +++
Sbjct: 122 EVPETSEAALEA 133


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