BLASTX nr result

ID: Cimicifuga21_contig00015580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015580
         (1025 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265575.1| PREDICTED: uncharacterized protein LOC100250...   219   1e-54
ref|XP_002313669.1| predicted protein [Populus trichocarpa] gi|2...   218   2e-54
emb|CAN71484.1| hypothetical protein VITISV_025338 [Vitis vinifera]   217   3e-54
ref|XP_002533502.1| conserved hypothetical protein [Ricinus comm...   211   2e-52
ref|XP_002527250.1| conserved hypothetical protein [Ricinus comm...   210   4e-52

>ref|XP_002265575.1| PREDICTED: uncharacterized protein LOC100250319 [Vitis vinifera]
           gi|296090565|emb|CBI40915.3| unnamed protein product
           [Vitis vinifera]
          Length = 282

 Score =  219 bits (557), Expect = 1e-54
 Identities = 123/274 (44%), Positives = 160/274 (58%), Gaps = 9/274 (3%)
 Frame = +3

Query: 3   SKRVTDPLNDNVKACFYGKQDF------SSSGSXXXXXXXXXXXXXXXXCSALHTQLQDD 164
           SKRVTDPL+D VKA   G+         SS                   C+       + 
Sbjct: 7   SKRVTDPLDDRVKARIVGRGSVPVSSGSSSDAGEESPCLSDLVYGFLEDCAEAQPSEMEL 66

Query: 165 SFDSIREDHHRFSESKVRESVKNLLDPMVNTXXXXXXXXXX---AVEMFDLFRSNKSVLQ 335
             ++  +D   F  ++V   V +LL P  N              AV      RSNK+ ++
Sbjct: 67  GSENDDDDTSPFDPTEV---VASLLYPKANVDRYRTLLFSHVSKAVGSLSCPRSNKAAIR 123

Query: 336 RKIVVFLRKLGHNAGICKTKWETSGGLTAGSYEFIDVVTLQQRYFIDVDFSGEFEIARPT 515
           R +   LR LGHNA +C+TKW+ SGGLTAG++EFIDV+  ++RY +D+DF+GEFEIARPT
Sbjct: 124 RNVAAVLRDLGHNAAVCRTKWDGSGGLTAGNHEFIDVLRSEKRYIVDLDFAGEFEIARPT 183

Query: 516 IEYASLLRVLPRVCTGRSEELMQIVRSMCEAAKRSLKNRDLHLPPWRKNRYMQLKWFGPY 695
            +Y  L++ LPRV  G+SE+L +IV+  C+AAKRSLK+R LHLPPWRKNRYMQ KWFGP 
Sbjct: 184 DQYKRLIQTLPRVFIGKSEDLKKIVKLTCDAAKRSLKSRGLHLPPWRKNRYMQNKWFGPC 243

Query: 696 RRTVNPVPSNVTLSYGLEKMTEKCRLVGFDVVSE 797
           RRT  P P    L+    + T KCR VGFD VS+
Sbjct: 244 RRTATPSP---PLAPASTEFTVKCRSVGFDAVSD 274


>ref|XP_002313669.1| predicted protein [Populus trichocarpa] gi|222850077|gb|EEE87624.1|
           predicted protein [Populus trichocarpa]
          Length = 289

 Score =  218 bits (555), Expect = 2e-54
 Identities = 133/286 (46%), Positives = 163/286 (56%), Gaps = 25/286 (8%)
 Frame = +3

Query: 3   SKRVTDPLNDNVKACFYGKQ-DFSSSGSXXXXXXXXXXXXXXXXCSAL----HTQLQDDS 167
           SKRVTDPL+D  KA   G+Q  + SSGS                         + L DDS
Sbjct: 7   SKRVTDPLDDKAKARLVGRQLSYVSSGSEHSADDDDDLPCLSELVHGFLENDDSDLTDDS 66

Query: 168 FDSIREDHHRFSE-------------SKVRESVKNLLDPMVNTXXXXXXXXXXAVEMFDL 308
            +    D  R                S  R+S +NLL   V+           A+E F  
Sbjct: 67  VNGYESDSDRVDSVADCKDFVEGILRSGSRDSYRNLLSAHVSK----------AMEAFSC 116

Query: 309 FRSNKSVLQRKIVVFLRKLGHNAGICKTKWETSGG--LTAGSYEFIDVV-----TLQQRY 467
             + + VL+RK++ FLR+LGHNA ICKTKWE+SGG  LTAG YEFIDVV     TLQ RY
Sbjct: 117 LINQRPVLRRKVMSFLRELGHNAAICKTKWESSGGGGLTAGGYEFIDVVQSKSSTLQNRY 176

Query: 468 FIDVDFSGEFEIARPTIEYASLLRVLPRVCTGRSEELMQIVRSMCEAAKRSLKNRDLHLP 647
            +D+DF+ +FEIARPT ++  L   LPRV  GRSE+L  IV+S+ +A+KRSLK+R+L LP
Sbjct: 177 VVDLDFASQFEIARPTSQFLKLQHSLPRVFVGRSEDLKTIVKSISDASKRSLKSRELSLP 236

Query: 648 PWRKNRYMQLKWFGPYRRTVNPVPSNVTLSYGLEKMTEKCRLVGFD 785
           PWRKNRYMQ KWFGPYRRTVNP P+             KCR VGFD
Sbjct: 237 PWRKNRYMQNKWFGPYRRTVNPSPATPP-----SVDVVKCRCVGFD 277


>emb|CAN71484.1| hypothetical protein VITISV_025338 [Vitis vinifera]
          Length = 282

 Score =  217 bits (553), Expect = 3e-54
 Identities = 122/274 (44%), Positives = 159/274 (58%), Gaps = 9/274 (3%)
 Frame = +3

Query: 3   SKRVTDPLNDNVKACFYGKQDF------SSSGSXXXXXXXXXXXXXXXXCSALHTQLQDD 164
           SKRVTDPL+D VKA   G+         SS                   C+       + 
Sbjct: 7   SKRVTDPLDDRVKARIVGRXSVPVSSGSSSDAGEESPCLSDLVYGFLEDCAEAQPSEMEL 66

Query: 165 SFDSIREDHHRFSESKVRESVKNLLDPMVNTXXXXXXXXXX---AVEMFDLFRSNKSVLQ 335
             ++  +D   F  ++V   V +LL P  N              AV      RSNK+ ++
Sbjct: 67  GSENDDDDXSPFDPTEV---VASLLYPKANVDRYRTLLFSHVSKAVGSLSCPRSNKAAIR 123

Query: 336 RKIVVFLRKLGHNAGICKTKWETSGGLTAGSYEFIDVVTLQQRYFIDVDFSGEFEIARPT 515
           R +   LR LGHNA +C+TKW+ SGGLTAG++EFIDV+  ++RY +D+DF+GEFEIARPT
Sbjct: 124 RNVAAVLRDLGHNAAVCRTKWDGSGGLTAGNHEFIDVLRSEKRYIVDLDFAGEFEIARPT 183

Query: 516 IEYASLLRVLPRVCTGRSEELMQIVRSMCEAAKRSLKNRDLHLPPWRKNRYMQLKWFGPY 695
            +Y  L++ LPRV  G+SE+L +IV+  C+AAKRSLK+R LHLPPWRKNRYMQ KWFGP 
Sbjct: 184 DQYKRLIQTLPRVFIGKSEDLKKIVKLTCDAAKRSLKSRGLHLPPWRKNRYMQNKWFGPC 243

Query: 696 RRTVNPVPSNVTLSYGLEKMTEKCRLVGFDVVSE 797
           RR   P P    L+    + T KCR VGFD VS+
Sbjct: 244 RRXATPSP---PLAPASTEFTVKCRSVGFDAVSD 274


>ref|XP_002533502.1| conserved hypothetical protein [Ricinus communis]
           gi|223526646|gb|EEF28889.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 285

 Score =  211 bits (538), Expect = 2e-52
 Identities = 129/281 (45%), Positives = 158/281 (56%), Gaps = 16/281 (5%)
 Frame = +3

Query: 6   KRVTDPLNDNVKACFYGKQDFS--SSGSXXXXXXXXXXXXXXXXC-----SALHTQLQDD 164
           KRVTDPL+D+ KA   G Q  S  SSGS                        + TQ  D 
Sbjct: 9   KRVTDPLDDDAKARLIGGQQLSYVSSGSEHSADVESPCLSELVHGFLEVDEDVETQSYDY 68

Query: 165 SFDSIREDHHRFSESKV--------RESVKNLLDPMVNTXXXXXXXXXXAVEMFDLFRSN 320
             DS R D        V        R+S +NLL   V             +EM  L+R+ 
Sbjct: 69  DSDSNRVDSVSDRTEDVARSLCLCERDSYRNLLLSHV----------LKGIEMLSLWRNQ 118

Query: 321 KSVLQRKIVVFLRKLGHNAGICKTKWETSGGLTAGSYEFIDVVTLQQRYFIDVDFSGEFE 500
           ++VL+RK++ FLR+LGHNA ICKTKW++SGGL AG+YEFID V L  RY ID+DF+ +FE
Sbjct: 119 RTVLRRKMMSFLRELGHNAAICKTKWDSSGGLNAGNYEFIDAVVLSNRYIIDLDFASQFE 178

Query: 501 IARPTIEYASLLRVLPRVCTGRSEELMQIVRSMCEAAKRSLKNRDLHLPPWRKNRYMQLK 680
           IARPT EY   ++ LPRV  G+SE L +I++ M +AAKRSLK RDL LPPWRKNRYMQ K
Sbjct: 179 IARPTNEYRKQVQSLPRVFVGKSENLKRIIKVMSDAAKRSLKTRDLSLPPWRKNRYMQNK 238

Query: 681 WFGPYRRTVNPVPSNVTLSYGLEKMTEKCRLVGF-DVVSEC 800
           W GPY RT N   S             KCRL GF + V+ C
Sbjct: 239 WLGPYHRTCNHQLSANPTMIEASVSVVKCRLFGFEEAVNSC 279


>ref|XP_002527250.1| conserved hypothetical protein [Ricinus communis]
           gi|223533343|gb|EEF35094.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 286

 Score =  210 bits (535), Expect = 4e-52
 Identities = 130/270 (48%), Positives = 162/270 (60%), Gaps = 10/270 (3%)
 Frame = +3

Query: 6   KRVTDPLNDNVKACFYGKQ-DFSSSGSXXXXXXXXXXXXXXXXC-----SALHTQLQDDS 167
           KRVTDPL+D+ KA   G Q  + +SGS                        L TQ     
Sbjct: 9   KRVTDPLDDDAKARLIGGQLSYGTSGSEHSADDDSPCLSELVHGFLEVDEDLETQSYTYD 68

Query: 168 FDSIREDHHRFSESKVRESVKNLL--DPMVNTXXXXXXXXXXAVEMFDLFRSNKSVLQRK 341
            DS R D    S+  V ++VK+L     M              VEMF L+R+ K VL+RK
Sbjct: 69  SDSDRVDS--VSDCAV-DAVKSLCVTTEMDLYRNLLLSHVLKGVEMFSLWRNQKPVLRRK 125

Query: 342 IVVFLRKLGHNAGICKTKWETSGGLTAGSYEFIDVVTLQQRYFIDVDFSGEFEIARPTIE 521
           ++ FLR+LGHNA ICKTKW++SGGL AG+YEFID V L  RY ID+DF+ +FEIARPT E
Sbjct: 126 VMSFLRELGHNAAICKTKWDSSGGLNAGNYEFIDAVVLSNRYIIDLDFASQFEIARPTKE 185

Query: 522 YASLLRVLPRVCTGRSEELMQIVRSMCEAAKRSLKNRDLHLPPWRKNRYMQLKWFGPYRR 701
           Y   ++ LP V  G++E+L +I++ M +AAKRSLK+RDL LPPWRKNRYMQ KW GPY R
Sbjct: 186 YWKQVQSLPIVFVGKNEDLKRIIKVMSDAAKRSLKSRDLSLPPWRKNRYMQNKWLGPYCR 245

Query: 702 TVN--PVPSNVTLSYGLEKMTEKCRLVGFD 785
           T N   + SN T+  G      KCRLVGFD
Sbjct: 246 TSNHHQISSNPTM-IGAAGNGVKCRLVGFD 274


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