BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00015539
         (740 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_175268.1| 50S ribosomal protein L18 [Arabidopsis thaliana...   234   2e-59
ref|XP_002891426.1| ribosomal protein L18 family protein [Arabid...   234   2e-59
gb|AFK34990.1| unknown [Lotus japonicus] gi|388495768|gb|AFK3595...   228   1e-57
ref|XP_004147640.1| PREDICTED: 50S ribosomal protein L18, chloro...   222   6e-56
ref|XP_002314349.1| predicted protein [Populus trichocarpa] gi|1...   221   9e-56

>ref|NP_175268.1| 50S ribosomal protein L18 [Arabidopsis thaliana]
           gi|73621536|sp|Q9SX68.1|RK18_ARATH RecName: Full=50S
           ribosomal protein L18, chloroplastic; AltName:
           Full=CL18; Flags: Precursor
           gi|5733872|gb|AAD49760.1|AC007932_8 Similar to 50S
           Ribosomal protein L18 from Thermotoga maritima
           gb|AE001798. ESTs gb|AI993387, gb|T75951 and gb|T22182
           come from this gene [Arabidopsis thaliana]
           gi|12484209|gb|AAG54003.1|AF336922_1 putative ribosomal
           protein L18 [Arabidopsis thaliana]
           gi|110740956|dbj|BAE98573.1| hypothetical protein
           [Arabidopsis thaliana] gi|332194156|gb|AEE32277.1| 50S
           ribosomal protein L18 [Arabidopsis thaliana]
          Length = 170

 Score =  234 bits (596), Expect = 2e-59
 Identities = 117/152 (76%), Positives = 131/152 (86%)
 Frame = -1

Query: 647 QHGKIYLPPTTTPKLSTRTNHSRPSHIVEAKTRTRTEDRQARHARIRKKVEGTTERPRLC 468
           QH  ++L P ++  L +R      S +VEAKT+T +EDR ARH+RIRKKV GTTERPRLC
Sbjct: 25  QHRAVFLKPWSSSSLQSR------SMVVEAKTKTSSEDRIARHSRIRKKVNGTTERPRLC 78

Query: 467 VFRSNKHMYVQVIDDSKMHTLASASTVQKPIVEDFDFTSGPTIEVAKKVGEVIAKSCLEK 288
           VFRSNKH+YVQVIDD+KMHTLASAST QKPI E+FD+TSGPTIEVAKKVGEVIAKSCLEK
Sbjct: 79  VFRSNKHLYVQVIDDTKMHTLASASTKQKPISEEFDYTSGPTIEVAKKVGEVIAKSCLEK 138

Query: 287 GITKVCFDRGGYPYHGRIQALADAAREHGLQF 192
           GITKV FDRGGYPYHGRI+ALA AAREHGLQF
Sbjct: 139 GITKVAFDRGGYPYHGRIEALAAAAREHGLQF 170


>ref|XP_002891426.1| ribosomal protein L18 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297337268|gb|EFH67685.1| ribosomal protein
           L18 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 170

 Score =  234 bits (596), Expect = 2e-59
 Identities = 117/152 (76%), Positives = 131/152 (86%)
 Frame = -1

Query: 647 QHGKIYLPPTTTPKLSTRTNHSRPSHIVEAKTRTRTEDRQARHARIRKKVEGTTERPRLC 468
           QH  ++L P ++  L +R      S +VEAKT+T +EDR ARH+RIRKKV GTTERPRLC
Sbjct: 25  QHRAVFLKPWSSSSLQSR------SMVVEAKTKTSSEDRIARHSRIRKKVNGTTERPRLC 78

Query: 467 VFRSNKHMYVQVIDDSKMHTLASASTVQKPIVEDFDFTSGPTIEVAKKVGEVIAKSCLEK 288
           VFRSNKH+YVQVIDD+KMHTLASAST QKPI E+FD+TSGPTIEVAKKVGEVIAKSCLEK
Sbjct: 79  VFRSNKHLYVQVIDDTKMHTLASASTKQKPISEEFDYTSGPTIEVAKKVGEVIAKSCLEK 138

Query: 287 GITKVCFDRGGYPYHGRIQALADAAREHGLQF 192
           GITKV FDRGGYPYHGRI+ALA AAREHGLQF
Sbjct: 139 GITKVAFDRGGYPYHGRIEALAAAAREHGLQF 170


>gb|AFK34990.1| unknown [Lotus japonicus] gi|388495768|gb|AFK35950.1| unknown
           [Lotus japonicus]
          Length = 162

 Score =  228 bits (581), Expect = 1e-57
 Identities = 122/174 (70%), Positives = 137/174 (78%)
 Frame = -1

Query: 713 MASSLSFLHQTALIGWSHSQSQQHGKIYLPPTTTPKLSTRTNHSRPSHIVEAKTRTRTED 534
           +ASSLSFLH  A    S S S       L  T+TP      N +    +VEAK+RTRT+D
Sbjct: 2   VASSLSFLHSCAFPSSSSSSS-------LFTTSTP------NPNSLPFVVEAKSRTRTDD 48

Query: 533 RQARHARIRKKVEGTTERPRLCVFRSNKHMYVQVIDDSKMHTLASASTVQKPIVEDFDFT 354
           R ARHARIRKKVEGT ERPRL VFRSNKH+ VQVIDD+KMHTLASAST+QK I E+F +T
Sbjct: 49  RTARHARIRKKVEGTPERPRLAVFRSNKHLAVQVIDDTKMHTLASASTMQKAIAEEFSYT 108

Query: 353 SGPTIEVAKKVGEVIAKSCLEKGITKVCFDRGGYPYHGRIQALADAAREHGLQF 192
           +GPTIEVAKKVGE+IAKSCLEKGITKV FDRGGYPYHGR+QALADAARE+GL F
Sbjct: 109 AGPTIEVAKKVGEIIAKSCLEKGITKVAFDRGGYPYHGRVQALADAARENGLDF 162


>ref|XP_004147640.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Cucumis
           sativus] gi|449498793|ref|XP_004160635.1| PREDICTED: 50S
           ribosomal protein L18, chloroplastic-like [Cucumis
           sativus]
          Length = 170

 Score =  222 bits (566), Expect = 6e-56
 Identities = 116/170 (68%), Positives = 136/170 (80%), Gaps = 1/170 (0%)
 Frame = -1

Query: 698 SFLHQTALIGWSHSQS-QQHGKIYLPPTTTPKLSTRTNHSRPSHIVEAKTRTRTEDRQAR 522
           SFL +T+ +  S+SQ+      ++ PPTT+       +  R S +VEAK  TR EDR AR
Sbjct: 9   SFL-RTSFLTVSYSQNILNRPHLHFPPTTS-------SSGRHSLVVEAKATTRREDRTAR 60

Query: 521 HARIRKKVEGTTERPRLCVFRSNKHMYVQVIDDSKMHTLASASTVQKPIVEDFDFTSGPT 342
           H+RIRKKVEGTTERPRL VFRSNKH+YVQVIDDSKMHTLA+ ST+QK I E  D+++GPT
Sbjct: 61  HSRIRKKVEGTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPT 120

Query: 341 IEVAKKVGEVIAKSCLEKGITKVCFDRGGYPYHGRIQALADAAREHGLQF 192
           IEVAKK+GE IAKSCLEKGITKV FDRGGYPYHGR++ALADAAREHGLQF
Sbjct: 121 IEVAKKIGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF 170


>ref|XP_002314349.1| predicted protein [Populus trichocarpa] gi|118487426|gb|ABK95541.1|
           unknown [Populus trichocarpa]
           gi|222863389|gb|EEF00520.1| predicted protein [Populus
           trichocarpa]
          Length = 165

 Score =  221 bits (564), Expect = 9e-56
 Identities = 108/135 (80%), Positives = 120/135 (88%)
 Frame = -1

Query: 596 RTNHSRPSHIVEAKTRTRTEDRQARHARIRKKVEGTTERPRLCVFRSNKHMYVQVIDDSK 417
           RT+ S     VEAK +TR EDR ARH RIRKKVEGT +RPRLCVFRSNKH+YVQVIDD+K
Sbjct: 31  RTSPSLSFVTVEAKAKTRREDRTARHIRIRKKVEGTPDRPRLCVFRSNKHLYVQVIDDTK 90

Query: 416 MHTLASASTVQKPIVEDFDFTSGPTIEVAKKVGEVIAKSCLEKGITKVCFDRGGYPYHGR 237
           MHTLASAST+QKP  +DFD++SGPTI+VAKKVGEVIAKSCLEKGITKV FDRGGYPYHGR
Sbjct: 91  MHTLASASTMQKPFAQDFDYSSGPTIDVAKKVGEVIAKSCLEKGITKVAFDRGGYPYHGR 150

Query: 236 IQALADAAREHGLQF 192
           + ALADAARE+GLQF
Sbjct: 151 VAALADAARENGLQF 165